Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ----------------->AG      <----------DOF2                                                                <-----------------AGL3  ------>MYB46(1)                                                                =====================================                               ------->TEIL                     ----------------->AGL1  ------>MYB83                              <---------CCA1(2)             <---------HSFC1(2)        ---------------                    ------>MYB46(1)               <---------GLK1(1)                  <---------------                    ------>MYB83                  --------->GLK1(1)                  <---------------    --------->GLK1(2) <---------ATHB12     <----------DOF2  --------->HSFC1(2)     <-----------GT1   tctaagtatctatagaagaaccaaatcaagctgtatctcattttcctttgagaaatctctgaagtttccaaatttgaaactgatttcaccaactttggta  18564000                         --------->ZAT14                         <---------ZAT14                       --------->ANAC46                    <-------TEIL                                                                    <                  <---------ARR14(2)                                                                < =MADS_MADS       <---------GLK1(2)                                                                 - >AGL15           --------->ARR14(2) --------->YAB1                             --------->ANAC58    - --AGL1      --------->LBD16        <---------ATHB12                            --------->ANAC58<---- --AG       --------->ANAC46      --------->WOX13(1)                ----------->GT1             -----   atagccctaatttcccccaagattcactgaacttgccaatcagaaaactcttcgaaataacccaaaatttaagtaaaaatgtaagctatgtgcttcttct  18564100   --------->ANAC55(1)   --------->ANAC58   --------->ANAC46   --------->ANAC58 ---------ZAT14                             --------->DAG2            <-------TEIL ---------ZAT18                           ---------->DOF2            --------->CCA1(2) -------->ZAT18                       --------->TOE2(3)         ---------->DOF2 -------->ZAT14                     --------->ARR11(3)      --------->HSFB2a(2) -----HSFB2a(2)                     <---------ARR11(3)      <---------HSFB2a(2) ---->HSFB2a(2)---------->DOF2----------->GT1           <----------DOF2   agtacacgaaaccatttgaaagaaacacagagtgctaaaatctcaaaaggctctgtttctttttagaaaagattcaaactagagaccagaaaacaaacaa  18564200                                   ----------->GT1                                --------->ALFIN1                       <---------ARR14(2)                               ---------->DOF2                       --------->ARR11(3)                          <---------ARR14(2)              <-                       <---------GLK1(2)--------->AHL20(2)    ------>NtERF2                    <-----                       <---------ARR11(3)                 --------->ANAC58          --------->At4g35610                       --------->ARR11(1)                 --------->ANAC58          <---------At4g35610                       --------->ARR14(2)         --------->CCA1(2)--------->ARR14(2)          <-----            <-------TEIL--------->CCA1(2)    ----------->GT1 <---------ALFIN1     <-----------RAV1(2)   aaaaaactgaagggtccgtttcaaagatttgcaagtgggggaataaatagagaaatgagaacgacaccgtatatgaaagaagtcgcagatgtctctcctt  18564300                                                                                                   --                                                                                                -----                                                    <---------LBD16                        ----------                      <---------ATHB12         <---------ARR14(2)                       <------ZmHOX2a(1)      <----------DOF2------>MYB83              --------->ARR14(2)                      --------->ANAC58  <----------DOF2    ------>MYB46(1)   --------->TOE2(2)                               --------->ANAC58 ----------GT1     <---------MYB46(2)  --------->TOE1(2)   --------->DAG2     <----------DOF2-------- ----DAG2          <---------MYB59    ----------->RAV1(2) ---------->DOF2     <---------DAG2 -------- -----DOF2      <-----------GT1     <---------ARR14(2)  *TSS                 <----------DOF2---------   ttttctttctttctgtatttaccaaacattcacatgtagaacctgagaggtttctctggagaaagtgatgttttttgggcctttttggcaggaaaaagca  18564400 --------->CCA1(2) ------->YAB1 ----->DOF2                  ----------->GT1       <-----------TBP >DOF2              --------->REM1(2)              --------->CCA1(2)                       <---------HSFB2a(1) ->ANAC58           <---------ZAT14               --------->ARR11(3)         --------->GLK1(2) ->ANAC58           --------->ZAT14              <<<<<<<<<RAP2.2             --------->ARR14(2) >DAG2             --------->ALFIN1     <-----------GT1                      <---------ARR14(2)   aagataaacgctgttttcagagtgtagagagaggtttatttttcactgtttagatatatagagagagagacagagagggaatcttgagagagaaggtttg  18564500                                                                                                    -                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                          <---------LBD16                                                      <-----                       <----------DOF2                                                         ------                   ------>ZmHOX2a(2)                                        ---------->DOF2   <------                  <------ZmHOX2a(2)                                        <---------ATHB12 <--------                 --------->ARR14(2)                            --------->ZAT14              ---------                 <---------ARR14(2)                       --------->At4g35610--------->DAG2<---------MYB52(1)                 <---------ARR11(3)        --------->ANAC58    <---------ZAT18          <------------                 --------->ARR11(3)        --------->ANAC58    <---------ZAT14          -------------                 --------->AGP1  --------->ANAC58     XXXXXXXXXXXXXXXXXXXX>MIR164A/B   ---------->ID1                <---------GLK1(1)--------->ANAC58     XXXXXXXXXXXXXXXXXXXX>MIR164C <---------MYB52(1)   atgggtttttgtattttgagatctgttttacggacacgaacacagaggcaatggagaagaagcagagcacattgccaataaagcggtttgtccgtttccg  18564600                                                                   <---------MYB46(3)                                                                 <---------ANAC58      ---------->DOF2                                            <-------GAMYB ---------->GT1                                                  <---------ANAC58 ---->HSFB2a(2)                                                 <------MYB83 -----HSFB2a(2)                                        --------->AHL20(2) ---->LBD16             <---------AHL20(1)  <---------YAB1      <------MYB46(1) ----ANAC46          <-----------GT1      --------->AHL20(2)    <---------MYB46(3) ----LBD16        <---------ICU4          <---------AHL20(2)   <---------AtMYB61 ----HSFB2a(2)    --------->YAB1         <---------AHL20(2)    --------->MYB59 --->HSFB2a(2) --------->YAB1          <---------ICU4  --------->AHL20(1) ---LBD16     <---------YAB1          --------->ICU4   <---------AHL20(2) -ARR14(2)   <---------AHL20(2)     --------->YAB1    <---------AHL20(2)            ---------->DOF2 >ARR14(2)   --------->AHL20(2)    --------->AHL20(2) --------->AHL20(2)       <---------YAB1 -----AGL1--------->ARR11(3)   --------->AHL20(2) <---------HSFB2a(2)    --------->AHL20(2) ---->AGL1<---------ARR11(3) <---------AHL20(2)   --------->HSFB2a(2)    <---------AHL20(2)   -------   ggaagtgaaaaagattttaataataacatattttaaaataaaaattatttttctaaaaaaattgtttggttgtttttaattttgataaaaggagagcaaa  18564700                                                              <---------MYB46(3)                                                             <---------ANAC46                                                          ----------->HVH21                                                --------->ANAC55(2)                              <---------ANAC46  <---------ANAC55(2)        <----------DOF2   --------------------->WRI1    --------->bZIP60(1)     ------->TEIL <---------At4g35610  <---------TOE2(3)<---------bZIP60(1) --->DOF2         --------->At4g35610  <---------YAB1--------->ICU4   gagtttgcacctttgaattgagctgtttcattgtttgtattatcgttgttaagtgatgatgtgatgggtgatgttgtacaattgtgcatcaacaatacaa  18564800                                                                                      ---------------                                                                                      <--------------                                                                                      <---------YAB1                                                                                     <---------------                                                                                     ================                                                                                     <---------------                                                                               <-----------GT1                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                            -------->HAHB4--------->AHL20(2)                                                            --------->YAB1<---------AHL20(1)      ---                                                      ----------->GT1  --------->AHL20(2)         ---                                             <---------YAB1--------->ICU4 <---------AHL20(2)      <--                                            <---------AHL20(1)        --------->AHL20(2)  --------->YAB1           <---------ZAT18                  <---------AHL20(2)        <---------AHL20(2) <---------YAB1           --------->ZAT18                  --------->AHL20(1)      --------->YAB1<----------DOF2 <-- ----------->GT1                            --------->AHL20(2)  <---------ANAC55(2)  ----------------   aaacagaaaaatgggcactatgcaatttgtattgtctattatgcattatatttagatggtaataatacataaataatttttttactttcttattatagaa  18564900  Previous    Next  AGI:  At5g45720.1    Description:  ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding. similar to ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT4G18820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48015.1); contains InterPro domain DNA polymerase III clamp loader subunit, C-terminal; (InterPro:IPR008921); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain DNA polymerase III, subunits gamma and tau; (InterPro:IPR012763) Range:  from: 18560420    to: 18564356    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.