Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <-------TEIL                                                                 <---------TOE2(3)                                                             ------>MYB46(1)                                                             ------>MYB83       --------->WOX13(1)                                  <---------MYB111(1)     <---------ATHB12                                      <---------MYB59   <-----------GT1   <-----   --------->WOX13(1)        <---------ICU4               ----------------->AGL1            --------- ->ARR14(2)        <-------TEIL                <---------KAN4(2) --------->MYB59         --------->YAB1 --ARR14(2)       --------->CCA1(2)   ----------->RAV1(1) <-----------------AGL1   --------->YAB1 ---   aaaaacaatcaatctcagagatacaatacaatcttttctccaacacaagaatatacaaatacctacttaggtacaaatttcacaatcacaagaataagaa  16506900                                         --------->HSFC1(2)                   <----------DOF2       <---------HSFC1(2)                  --------->TOE2(3)      <---------HSFB2a(1)                ------->TEIL     <-----------RAV1(2)                                 <------NtERF2              <---------ZAT18   <-------TEIL                                        ------>NtERF2              --------->ZAT18  --------->CCA1(2)                       ---------->DOF2<---------ANAC46            <---------------AtSPL8       --------->HSFB2a(1)       >>>>>>>>>NAM    <---------DEAR3(1) ----ICU4   <---------------AtSPL3  <------ZmHOX2a(1)         ---------->DOF2     --------->ATERF1(1) >YAB1    <---------ICU4       --------->GLK1(2)            <---------ZAT6       <---------ATERF1(1) ------>YAB1--------------->AtSPL8 --------->LBD16        --------->YAB1        ----------->HVH21<---   tcacaaaactaataagtgtacctttacttagagattcaggagaaggttccatggtatcaatagtgaaagggatgaaagcgagacgacggcgagaagcagg  16507000                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                           --------->YAB1    ------->GAMYB                                                                           <--------ATHB1    --------                                           <------NtERF2                   --------->ATHB12 <--------                                           <---------------------WRI1      <---------ICU4   <--------                                          <---------RAP2.3(1)             --------->ICU4    ---------                                         <---------DEAR3(1)               <---------ATHB12  <--------                                         <---------DEAR4(1)          ------>ZmHOX2a(1)  <------NtERF2                                         <---------At1g77200    <---------bZIP60(1)   <---------ANAC46                                         <---------DREB2C(2)    <---------ANAC58      <---------ANAC58                                         <---------RAP2.3(3)    --------->TGA1a       <---------ANAC58                                      <-----------RAV1(1)       --------->bZIP60(1)  <------NtERF2                                   ------->TEIL                 <---------TGA1a    <---------DEAR3(1)                                --------->ANAC55(2)             =====================================    --------->GLK1(2)           <---------ANAC55(2)             =========================MYC_MYB-----    ------->TEIL            <-------GAMYB--------->ETT(1)       <---------ANAC58<---------ANAC58-----   <---------GLK1(2)        ==============================================MYC_MYB --------->ATERF1(1) --------->ANAC55(2)    ==================================================MYC_MYB<-------GAMYB------- <---------ANAC55(2)    ------------>AtMYB77                    =====================================MYC_MYB --------->ANAC58      ----------->HVH21<---------ORA47(1)      ===================================== --------->ANAC58   <-----------RAV1(2)<-----------HVH21      <---------TGA2(2) <---------ANAC58----- --------HVH21      ==============================RAV        ----------->HVH21  <---------ANAC46-----   gtcacgaatctcagagagaacctcagggacagttacgaatttgtcggcgaagtttgttaagctctgacgtccttcaatgatggcgttggcgtcaacaacc  16507100    --------->ARR11(3) ----->LBD16 -->GAMYB                                                <---------ZAT2 ---->ANAC58                                             --------->ZAT2 --->MYB46(3)                                            <---------At4g35610 ->MYB55(1)                                              <---------GLK1(1) -MYB111(2)                                  --------->GLK1(2)    <---------MYB52(1) -MYB55(2)                                  <---------GLK1(2) --------->LBD16               <-------- >MYB46(3)                               --------->LBD16 --------->GLK1(1)                 ------>ZmHOX2a(2) -MYB52(2)--------------->AGL15         --------->LBD16  --------->At4g35610             <---------ARR11(3) ==MYC_MYB<---------------AGL15      ------>MYB46(1)    <-----------ARR10                --------->ARR14(2) ---->ANAC58                       --------->AtMYB61   <------NtERF2                     <---------ARR14(2) ---->RAP2.6(2)    <---------ARR14(2)-------->P       --------->LBD16                    <---------AGP1 ->P<---------ARR11(3)            --------->MYB46(3)<---------LBD16           <----------DOF2 ===MYC_MYB<----------DOF2  --------->ARR14(2)     ------>NtERF2  --------->DOF5.7(2)    --------->ARR11(3) ---->TOE2(3)      --------->ARR14(2)------>MYB83 --------->DEAR3(1)    --------->LBD16 <---------CCA1(2) ---->ANAC46  <---------ANAC46 <---------ETT(1) --------->At4g35610   <---------LBD16 --------->ALFIN1   gcaatagatattccttttgtggatttgcagtttccgaccatcccgagaatcgctgccggagctccgtcgttaaccggaggctttgaaggtggatctttct  16507200                                 ------>ZmHOX2a(2)                                 <-------TEIL                         ----------->GT1                       <------MYB83                                   <------MYB46(1)                       --------->MYB52(2)                            <---------MYB46(3)                       <---------MYB46(3)                         <---------ANAC58                       <------MYB46(1)                        <-----------RAV1(1)                      <---------AtMYB61               ------>NtERF2 --------->ALFIN1                     <--------P <------ZmHOX2a(2)   <---------RAP2.6(2)     <---------TOE2(3)                  <---------TOE2(3)            --------->MYB52(2) <---------ANAC58           <---------ALFIN1    <---------ARR14(2)  <---------At5g28300<------MYB83       <---------At4g35610     --------->ARR14(2) <-----------GT1<---------MYB46(3) --DOF2--------->At4g35610  <---------ANAC46 <---------MYB52(1) --------->ALFIN1           --------->CCA1(2)   tcacaattgagctccacatcgaggttggtttcggatccatggttttcgttatttgccgcttcaaatgtgggtgggtttaacgaagagactgagagatgga  16507300                                            --------->O2                                            =================bZIP_DOF                                            --------->TGA1a                                            <---------bZIP60(1)                                            <---------TGA1a                                            <---------bZIP60(2)                                 <----                                            <---------DEAR3(1)                                  <----                                            --------->bZIP60(1)                             <--------                                            <---------O2                                   <--------ATHB1                                   ------>ZmHOX2a(2)                                       <---------ICU4                                  --------->CCA1(2)                                        -------->HAHB4                                  <------ZmHOX2a(2)                                        --------->ATHB51                                 --------->AGP1                                            --------->ATHB12                                 <---------ARR14(2)                                       --------->ICU4                                <---------At4g35610                                       <---------ATHB12                                --------->At4g35610                              --------->ANAC58                               ----------->ARR10  <----------DOF2           ----------->HVH21   <----           <---------ZAT6    *TSS--------->ARR14(2)          <---------ICU4 <------NtERF2 --------->AHL20(2)           ----------->GT1  <-----------HVH21     <---------DAG2  <---------AHL20(2)      <---------AHL20(2)         ----------->GT1--------->TOE2(2)   --------->bZIP60(2)   --------->AHL20(2)      <---------ATHB51   >>>>>>>>>TBF1        --------->TOE1(2)----------->HVH21   --------->ATHB51    --------->ANAC58   gagaagaagaagagtgtaaacaaaaacctaggtcagatccgagacgacgtcgctttttgtccataattttaaatgggcctcacaaggcccaaataattgc  16507400                                                           ------>MYB83                                                         <---------MYB59                                                      ------>MYB83<------ZmHOX2a(2)                                                    --------->AtMYB61       --------->AHL20(2)                           <---------MYB59 -----ANAC58                                     <-----------GT1 --------->ARR11(3)            <----- -----ANAC46                                 <---------ZAT6------>MYB46(1)                   -------- ----CBF                               --------->ZAT6 ------>MYB46(1)            <---------TOE2(3) -----ANAC58                   <---------GLK1(2) <<<<<<<<<GT-1   <---------ARR11(3)--------->YAB1   gtagatgtataaaatactatctgattagagctagaatttgaagactagtattaaccaaaccaaactagatcatatcaagggttaatgatatcaaattata  16507500                                    ----------->GT1                                    --------->ANAC58                                    --------->ANAC58                                  <<<<<<<ZML2                               <---------HSFB2a(2)       ------->TEIL --------->CCA1(2)             -                        --------->RAP2.6(3)              <-----------ARR10                          -                       --------->MYB52(1)                --------->GLK1(2)             <-----------ARR10                    --------->TOE1(3)     --------->ARR11(3)         --------->ARR11(3)--------->GLK1(2)                 -------->P    --------->HSFC1(1)        <---------ARR11(1) --------->GLK1(1)       <             <-----------GT1   <---------HSFC1(1)  <---------GLK1(1) --------->AHL20(1)------->TEIL -    <-----------GT1 --------->TOE2(3)--------->TOE2(3)  <---------ARR14(1)  <---------GLK1(1)   ----- ----YAB1   <-----------GT1    --------->HSFB2a(2) --------->GLK1(1)--------->AHL20(2) <---------ARR11(1) ->YAB1 <----------DOF2<---------DOF5.7(2)<---------ARR11(3)  --------->AtLEC2        <---------ARR14(1)   gttgtgtttcctttttatcaacccttaacggctctagaacgtaaaatctatggaaatcgaatctatgcaaatatatggaaatcgaaacgaatctatctat  16507600                                           <---------ARR11(3)                                          <---------CCA1(2)           <<<<<<<<<<AtSR1               <---------ARR11(3)          --------->ANAC55(2)            --------->AHL20(1)      <----------DOF2                    <---------AHL20(1)     <---------ICU4                      --------->ARR11(3) -------->ANAC58                    --------->AHL20(2) -------->ANAC46                    ----------->TBP ---------ALFIN1             <------ZmHOX2a(2)                                         ---------->DOF2 -------->ANAC58             <---------ATHB12            <-----------GT1            <-----------GT1 ---->AtLEC2           <-----------GT1  --------->AHL20(2)                     <----------DOF2   gcacacatctttacgcgtttttttatcaccgatcatctataaatatatctaattctttctaactatttcatagttcatcatctttttcacaaagccaaag  16507700                                                          --------->YAB1                                                         <---------ATHB12                             ----------->GT1            --------->ANAC58            <---------ICU4                           <---------ANAC58             --------->ANAC58         --------->YAB1          <----------DOF2  <---------ANAC58            --------->WOX13(1)       <------ZmHOX2a(2) ---     <---------ANAC58      ----------->GT1           ------------>CBF           =====================     <---------ANAC58<----------DOF2              <----------DOF2  --------->At4g35610         ------   tttgtcttcgtgctttctcttaactttgagcgtgaaaaaacacagagtttgtctttgcaatcaacaagaagatgactatgcgatcatcttcaccttcgtc  16507800  Previous    Next  AGI:  At5g41190.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN66411.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62795.1); contains InterPro domain D-site 20S pre-rRNA nuclease (InterPro:IPR017117); contains InterPro domain Nin one binding (NOB1) Zn-ribbon like (InterPro:IPR014881) Range:  from: 16504703    to: 16507329    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g41200.1    Description:  AGL75; DNA binding / transcription factor. similar to AGL43, transcription factor [Arabidopsis thaliana] (TAIR:AT5G40220.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 16507772    to: 16508764    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.