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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
WOX13(2)
<---------
WOX13(2)
<---------
AHL12(2)
<---------
AHL20(3)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL12(3)
<---------
AHL20(2)
--------->
AHL25(1)
<---------
AHL25(2)
--------->
AHL20(3)
<---------
AHL25(3)
--------->
AHL25(2)
<---------
AHL25(1)
--------->
AHL12(1)
<---------
AHL12(1)
<---------
AHL25(2)
<---------
AHL12(3)
--------->
AHL12(3)
--------->
AHL20(2)
<---------
AHL25(3)
<---------
AHL20(2)
--------->
AHL25(2)
--------->
AHL25(1)
--------->
AHL25(3)
<---------
AHL25(1)
<---------
AHL12(2)
--------->
ICU4
<---------
AHL20(2)
<---------
AHL25(2)
--------->
AHL12(3)
<---------
AHL20(3)
--------->
AHL20(3)
<---------
AHL12(3)
<---------
AHL20(2)
--------->
YAB1
<---------
AHL12(2)
<---------
YAB1
<---------
WOX13(2)
<---------
AHL12(2)
<---------
AHL12(3)
<---------
AHL25(2)
--------->
AHL12(1)
--------->
AHL20(3)
<---------
AHL12(1)
--------->
AHL20(1)
<---------
AHL25(3)
--------->
AHL25(2)
<---------
AHL25(1)
<---------
AHL12(3)
--------->
AHL25(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
ATHB51
--------->
AHL12(1)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
AHL25(3)
<---------
AHL12(1)
<---------
YAB5
<---------
AHL20(1)
--------->
AHL12(1)
--------->
AHL20(2)
--------->
AHL12(2)
<---------
AHL25(2)
<---------
AHL12(2)
--------->
AHL25(3)
<---------
ICU4
-------->
GLK1(1)
--------->
YAB1
<---------
RVE1(1)
---------
GLK1(1)
<---------
YAB1
<---------
ARR11(3)
<---------
TOE2(3)
------->
GATA12
<---------
AHL20(3)
--------->
YAB1
<---------
ARR11(3)
-->
RVE1(2)
--------->
AHL25(2)
--------->
RVE1(2)
<---------
GLK1(2)
>
AHL12(1)
<---------
AHL20(3)
<---------
YAB1
--------->
ARR11(3)
---------->
DOF2
<
-
AHL12(1)
--------->
AHL20(3)
<-----------
GT1
<---------
AHL20(2)
<---------
AHL12(1)
<---------
AHL12(2)
agatttctctagtcaaaatattataaaaattaaattactatcaacatattttaaaagatttttaagaattatttaaaagctattgacaaaaaaaaaacat
16387200
--------->
WOX13(2)
----------->
GT1
<---------
ANAC58
<---------
ANAC46
--------->
YAB1
<---------
ANAC58
<---------
YAB1
-
--------->
LBD16
<---------
YAB5
------
--------->
HSFC1(1)
<-----------
GT1
----------->
GT1
----------->
GT1
<---------
HSFC1(1)
<-----------
GT1
--------->
YAB1
---------->
DOF2
---------->
DOF2
<---------
HSFB2a(2)
<----------
DOF2
--------->
YAB1
-------
---------
AHL20(2)
--------->
HSFB2a(2)
--------->
MYB52(1)
<-----------
GT1
--------
attttaaaagataaaacaaatttcatatttccagaaaatgcttgtaaataacttaactgcatttcttttatcattttcacattcaaaacaaagtaaaaag
16387300
<---
-----
<----
-----
<---------
DOF5.7(2)
-----
<---------
WRKY38(1)
-----
-------->
HAHB4
-----
--------->
YAB1
<----
--------->
ICU4
----------->
GT1
<---------
WRKY12
-----
--------->
AHL20(2)
<---------
ARR11(3)
<---------
WRKY45
<------
----------->
GT1
<---------
TOE2(3)
<---------
YAB1
------>
NtERF2
--------->
DAG2
---------->
DOF2
--------->
YAB1
<--------
--------->
DOF2
--------->
RVE1(2)
--------->
ARR11(3)
<<<<<<<<<
WRKY6
--------->
RAP2.6(2)
----->
GT1
--------->
AtMYB61
<---------
ATHB12
--------------->
AGL15
<---------
RAP2.6(2)
-->
DAG2
<-----------
GT1
<---------
WOX13(2)
<---------------
AGL15
------->
TEIL
<---------
At4g35610
-->
DOF2
<---------
ICU4
--------->
WOX13(2)
<-----------
GT1
<---------
TOE1(3)
<---------
KAN1
taaaaagtaattactaccaaaacaatctaagtttcaataaaggaagatagtatttactaataatagtcaacgttatggacttgttgaatatagcggccac
16387400
------->
MYC3
------->
MYC4
<-------
PIF5
------->
MYC2
------->
PIF5
<-------
MYC4
<-------
MYC2
<-------
MYC3
<<<<<<<<<<
HY5
<---------
O2
<-----------
RAV1(2)
--------->
TGA1a
--------
HVH21
<---------
ANAC46
---->
ANAC58
<---------
TGA1a
-----
O2
--------->
PIF3(3)
---
---->
O2
----------->
GT1
<---------
ANAC46
<---------
PIF3(3)
<---
---->
ANAC46
------>
MYB46(1)
--------->
ANAC46
<---------
ALFIN1
<----
---->
ANAC58
------>
MYB83
--------->
ANAC58
<---------
KAN1
------
---->
TGA1a
--------->
AtMYB61
--------->
MYB52(1)
--------->
LBD16
--------->
ATHB12
-----
TGA1a
--------->
ANAC58
--------->
TOE1(2)
--------->
HSFB2a(2)
--------->
YAB5
---->
bZIP60(2)
--------->
ANAC58
--------->
MYB46(3)
<-----------
GT1
---------------->
PIF3(2)
---
ALFIN1
--------->
ANAC46
<---------
MYB52(2)
<---------
AHL20(2)
--------->
O2
<-----
---
HVH21
----------->
GT1
<--------------
OsCBT
--------->
ANAC58
<---------
LBD16
--------->
ALFIN1
<--
gtcgtctcagaaggcaaaaacagcacgagaccaacgcgaagtgaaacaaacgacatcgtgtattttatctcccgaatgagccacgtggatgactgagtgg
16387500
--------->
RVE1(2)
------------>
CBF
<------
NtERF2
<---------
ALFIN1
------>
NtERF2
--------->
ANAC46
<---------
ATERF1(1)
--------->
MYB46(3)
<---------
ATERF1(2)
<---------
ANAC58
--------->
TCP15(2)
--------->
ATERF1(2)
<---------
ANAC58
--------->
ARR11(3)
--------->
RAP2.6(2)
<---------
ANAC58
<---------
ARR14(2)
--------->
DEAR3(1)
<---------
ANAC46
--------->
ARR14(2)
--------->
ATERF1(1)
<---------
ANAC58
--------->
RVE1(2)
--------->
SPL7(1)
<-----------------------
TaNAC69(2)
<---------
ARR14(3)
<---------
SPL7(1)
------->
GAMYB
--------->
ARR14(3)
--------->
At4g35610
<---------
At4g35610
<---------
ARR11(3)
--------->
YAB1
--------->
ARR14(2)
------------>
CBF
--------->
TCP23
--------->
ATHB12
--------->
At4g35610
*
TSS
------>
PCF2
<---------
TCP20
<---------
ATHB12
--------->
ARR14(3)
<--------
------
PCF2
--------->
PCF2
<---------
KAN1
<---------
ARR14(3)
<--------
-----
ATERF1(1)
<---------
TCP15(1)
--------->
ANAC58
--------->
ARR11(3)
<--------
--->
ZAT18
<---------
PCF2
--------->
ANAC46
<---------
ARR14(2)
<--------
----
ZAT18
--------->
TCP15(1)
--------->
ANAC58
<---------
ARR11(3)
---------
-------
TCP20
----------->
HVH21
------>
NtERF2
<---------
YAB5
<---------
CCA1(2)
------------>
CBF
gctccacaatatcttcatgggacccacaacgcttctccgactaagttacacgaatcatcggccggccaatatcttcaactgcgtgcgaggcaata
cgtgt
16387600
<---------
ARR14(2)
--------->
GATA12
--------->
ARR14(2)
--------->
ARR11(2)
--------->
ARR11(1)
<---------
ARR11(2)
<---------
RVE1(2)
<---------
ATHB12
<---------
GATA12
--------->
WOX13(1)
--------->
RVE1(2)
--------->
KAN1
<---------
ANAC58
<---------
ARR14(2)
<--------
P
<---------
ANAC58
<---------
ARR11(3)
<---------
WOX13(1)
--------->
ALFIN1
-
--------->
ARR14(2)
<---------
WOX13(2)
<-------
MYC3
-----
--------->
GATA12
--------->
ATHB12
--------->
TOE2(2)
-----
--------->
GLK1(2)
<---------
AHL20(2)
------->
MYC3
<-----
--------->
YAB1
<---------
YAB1
------->
MYC2
<---------
ZAT18
XXXXXXXXXXXXXXXXXXXX>
MIR1888
--------->
WOX13(2)
<-------
MYC2
--------->
ZAT18
--------->
RVE1(2)
--------->
AHL25(3)
--------->
TOE1(2)
------>
ZmHOX2a(2)
-
ANAC55(2)
--------->
AHL20(2)
<---------
ANAC58
<------
ZmHOX2a(2)
-
ANAC58
<---------
ANAC58
<---------
ANAC58
=============================
-
ANAC58
----------->
GT1
<----------
DOF2
<---------
KAN1
<-----------
HVH21
<---------
GATA12
-
-
ANAC55(1)
<---------
ANAC58
<-------
TEIL
--------->
KAN1
---------->
DOF2
--------->
DEAR3(1)
>
ANAC55(2)
<---------
ANAC46
--------->
ARR14(1)
--------->
ANAC46
--------->
GATA12
-
caaaatcaaaatctgtaaaaaacttgcgttttaattggtagattcgaatttgaaacgtgcgcgtcaatgagtttaaaagctcgtgagatcgcccact
atg
16387700
<---------
DEAR3(1)
<---------
ANAC46
<------
NtERF2
<---------
LBD16
--------->
ATERF1(1)
<---------
RAP2.3(1)
<---------
RAP2.6(2)
<---------
O2
<---------
RAP2.3(2)
<---------
RAP2.3(3)
<---------
bZIP60(1)
--------->
ATERF1(2)
<---------
DEAR3(1)
<---------
ANAC46
<---------
RRTF1(3)
<---------
ATERF1(1)
----------->
TGA1
<-----------
HVH21
<---------
ATERF1(1)
<---------
DEAR3(2)
--------->
RVE1(2)
<---------
LBD16
--------->
LBD16
------
--------->
ARR14(2)
<---------
At4g35610
--------->
ANAC58
<------
--------->
ANAC58
<--------
ATHB1
------>
NtERF2
--------->
ANAC58
<------
<---------
O2
--------->
KAN1
<---------
RRTF1(1)
<---------
ANAC55(2)
-------
--------->
O2
--------->
YAB5
<---------
ERF1
--------->
ANAC55(2)
<------
--------->
ANAC46
--------->
AHL12(1)
<------
ZmHOX2a(1)
----------->
GT1
-------
--------->
ANAC58
<---------
KAN1
<---------
ATERF1(2)
<---------
HSFB2a(2)
-------
--------->
TGA1a
<---------
AHL25(1)
--------->
ATERF1(1)
<---------
ANAC46
<-------
-------->
ANAC58
--------->
YAB5
----------->
HVH21
--------->
ALFIN1
<---------
SPL7(1)
---->
YAB1
<---------
ARR14(2)
--------->
At4g35610
<---------
DEAR3(1)
<---------
ZAT6
---->
YAB5
<---------
ARR11(2)
--------->
LBD16
--------->
MYB52(1)
--------->
DOF5.7(1)
<---------
AtMYB61
----
YAB1
--------->
ARR11(2)
<---------
DEAR3(1)
<---------
AtMYB61
--------->
ALFIN1
==============
bZIP_DOF
<---------
AHL12(1)
<------
NtERF2
<---------
LBD16
<---------
DEAR3(1)
-------->
ANAC46
<---------
At4g35610
<---------
RRTF1(2)
<---------
SPL7(1)
--------->
MYB52(1)
--
-------->
ANAC58
--------->
At4g35610
--------->
ATERF1(1)
<---------
ZAT6
<------
ZmHOX2a(1)
------
ataagccacgactcgtttccgatgaataattcgccggtgacggcggaggagaacggtggtgttacggaaaaatccatacaggagaacggtggtgttacgg
16387800
<----
<----
-----
<---------
DOF5.7(1)
<----
--------->
RVE1(2)
--------->
ANAC55(2)
-
--->
LBD16
--------->
WOX13(1)
<---------
ANAC55(2)
<---
---
ANAC46
--------->
ARR11(3)
<---------
ANAC55(1)
<---
---
ANAC55(2)
<---------
ARR11(3)
<---------
ANAC46
-------
-->
ANAC58
--------->
RVE1(2)
<---------
AHL12(2)
<------
---
HSFB2a(2)
<---------
ARR14(2)
--------->
WOX13(2)
-------
-->
ANAC55(2)
--------->
ARR14(2)
--------->
AHL12(2)
<--------
-->
ANAC58
--------->
RVE1(1)
<---------
WOX13(2)
<--------
--
LBD16
<---------
AHL20(2)
--------->
CCA1(1)
----------->
GT1
---------
------->
DOF5.7(1)
------>
ZmHOX2a(1)
----------->
GT1
--------->
GLK1(1)
---------
----->
GT1
---------->
ID1
--------->
AHL20(2)
<---------
GLK1(1)
<---------
AHL20(2)
aaaaatccatttttttgtctccttctactaagaaaatatctg
gtatcaatcttctctgtatgagaaatctctggtaaattatgtgttatataaaaacgta
16387900
<---------
AHL20(2)
<---------
AHL12(3)
<---------
KAN1
---
TEIL
-----
TOE1(2)
-->
TEIL
--------->
DOF5.7(1)
-----
TOE2(2)
--------->
DOF5.7(1)
<------
NtERF2
------>
TEIL
--------->
DAG2
<---------
MYB46(3)
------
ANAC55(2)
---------->
DOF2
<---------
ATERF1(1)
------
ANAC46
--------->
LBD16
------>
NtERF2
-->
TOE1(2)
<---------
ATERF1(2)
<---------
MYB52(1)
---
SPL7(1)
--------->
ARR11(2)
--------->
LBD16
-->
TOE2(2)
<---------
GLK1(2)
--------->
At4g35610
<---------
RVE1(2)
-------
AtSPL3
<----------
DOF2
--------->
ATERF1(2)
<---------
LBD16
<---------
MYB46(3)
-------
AtSPL8
<---------
DAG2
<---------
LBD16
<---------
At4g35610
--------->
At5g28300
------>
AtSPL3
--------->
YAB1
<---------
ARR14(2)
<---------
KAN1
<---------
DEAR3(1)
---
------>
AtSPL8
<---------
YAB5
--------->
ARR14(2)
--------->
GLK1(2)
--------->
LBD16
<---------
YAB5
cgtatatatatgagtttattcatactttaccttcag
aatcgccggtaaaggagaatttagctccggtggctactccgaagacggtggataatggtttaag
16388000
<
------
<------
<------
<---------
DOF5.7(1)
<----------
DOF2
-------------
--------------
--------------
<-------------
--------------
<---------
ANAC58
---------->
ID1
<------------
<---------
ANAC58
<------------------------
ANAC81
--
=======================================================================
=======================================================================
<---------
MYB46(3)
<----------
DOF2
<----------
DOF2
<-------------
<---------
AtMYB61
<---------
HSFC1(2)
<---------
DOF5.7(1)
<-------------
--------->
ARR11(3)
--------------->
AGL15
<---------
YAB5
--------------
--------->
GATA12
<---------------
AGL15
<---------
ARR11(3)
<-------------
<---------
GATA12
<<<<<<<<<
TBF1
--------->
HSFC1(2)
--------->
GLK1(2)
--------->
WOX13(2)
------>
ZAT18
--------->
ALFIN1
--------->
GLK1(2)
--------->
YAB1
<-----------
RAV1(1)
<------
tgctcaagtgaaatctcggtggtcgttttcttcttctaagagaagctttg
gtacttgtttcataatctttttttttgttgttttcaatttccttttatgg
16388100
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AGI:
At5g40860.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62725.1)
Range:
from: 16387596
to: 16389213
Orientation: Forward
Links:
TAIR
MIPS
AIP
Please cite the corresponding
publications
when using AthaMap.