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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<<<<<<<<<
TBF1
XXXXXXXXXXXXXXXXXXXX>
MIR838
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
XXXXXXXXXXXXXXXXXXXX>
MIR396B
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
--------->
YAB1
------>
ZmHOX2a(1)
<<<<<<<<<
TBF1
<---------
ALFIN1
--------->
ANAC58
--------->
ZAT6
-----------------------
ANAC81
<<<<<<<<<
TBF1
<---------
ARR11(3)
--------->
ANAC58
--------->
YAB1
<---
tcttcttcctcttcttcttcttcttcttcttcttcttcttcttccacatcttccttcaatttgagcaaggaagaaactccattcataacacaatcttcaa
16151700
--------->
TOE1(3)
--------->
TOE2(3)
--------->
GLK1(1)
<---------
GLK1(1)
<-------
TEIL
<---------
MYB52(1)
<---------
GLK1(2)
<----------
DOF2
--------->
ARR14(2)
--------->
ARR14(2)
----------->
RAV1(1)
<-------
GAMYB
<---------
ARR14(2)
<-----------
GT1
--------->
MYB46(3)
<---------
At5g28300
<---------
ALFIN1
------
ATHB12
<---------
GLK1(2)
--------->
TOE2(3)
<---------
DAG2
--------->
ETT(1)
<--------
taactccagattcgttcaaattcttctcatttttctcgtcaacatcaacaacaacatcagactttttctcaccgttgtcggaaaccctaacaccgttctc
16151800
<---------
ARR11(1)
------->
TEIL
<-----------
ARR10
<---------
ZAT2
--------->
ZAT14
--------->
ARR14(2)
--------->
ZAT2
--------->
At4g35610
<---------
CCA1(2)
----------->
RAV1(2)
--------->
LBD16
<---------
At4g35610
--------->
ANAC58
<---------
TOE2(3)
<---------
ZAT14
--------->
ANAC58
<---------
TOE1(3)
<---------
At4g35610
<---------
LBD16
--------
<----------
DOF2
--------->
At4g35610
--------->
PCF2
--------->
ARR14(2)
-
MYB52(1)
--------->
YAB1
<-----------
RAV1(2)
--------->
MYB59
<---------
GLK1(2)
ttgaacaacaccatcatcttttagggttttctcagctgattcaatctctgcagaacaaggcttaggtcccgcatcttctccgattcccaaaacaacttca
16151900
---
<--
--------->
ANAC58
--------->
ANAC58
------>
MYB83
------>
MYB83
------>
MYB46(1)
---------
----------->
GT1
--------->
MYB52(1)
------>
MYB46(1)
<---------
ZAT14
<---------
MYB111(1)
--------->
ANAC58
------>
NtERF2
----------->
GT1
<---------
MYB59
--------->
ANAC58
<---------
HSFB2a(2)
<----------
ID1
<---------
MYB46(2)
--------->
ANAC46
<-----------
GT1
--------->
AHL20(2)
--------->
YAB1
------->
TEIL
--------->
ANAC46
->
TOE2(3)
--------->
HSFB2a(2)
--------->
MYB52(1)
--------->
AHL20(2)
<-----------
GT1
---
atttccat
ttttcttcccga
ctgtagaaaaaaaaaatcacaaaacgacaaacaaatcagaaaaaaaaatcaacctaactatttacacacaaacccaacaa
16152000
-------
<------
<------
-------
<------
<---------
AHL20(2)
<----------
ID1
--------->
ANAC58
--------->
AHL20(2)
------>
ARR11(3)
<------
MYB46(1)
----------->
GT1
<---------
MYB59
-------
ARR11(3)
<------
MYB83
--------->
ANAC58
--------->
DAG2
--------->
ANAC55(2)
-->
RAV1(1)
<---------
TOE2(3)
----------->
GT1
--------->
AHL20(1)
------>
ARR14(2)
--------->
MYB59
--------->
TOE1(2)
---------->
DOF2
<-----------
GT1
--
tatctcccaaaaaaacaaattttgaaattaggttaactcttacgaaaaacctagaaaaacgaaaatataaagtaacaaattttttac
ctgattttgagct
16152100
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
--------->
MYB46(3)
-->
ZAT2
--------->
DEAR3(1)
---
At4g35610
--------->
At4g35610
---
ZAT2
--------->
HSFB2a(2)
*
TSS
--------->
GLK1(2)
-->
At4g35610
<---------
DAG2
--------->
GLK1(2)
---------->
DOF2
<----------
---
GLK1(1)
<----------
DOF2
<---------
ARR11(3)
<----------
ID1
<---------
GLK1(2)
------->
LBD16
--------->
MYB46(3)
<---------
GLK1(2)
<----------
DOF2
--------->
YAB1
ccgagagaaacgaaacaacaacttttcgaacagcgaccgaagaa
tcttcaagaaaaaacacttctttgtaagaagaacaaagacactctcagaatctcat
16152200
<-----------
GT1
<------
NtERF2
------>
NtERF2
--------->
RAP2.3(2)
<---------
ANAC46
------>
NtERF2
--------->
RAP2.3(1)
-
<------
NtERF2
<---------------
AGL15
<
<-----------
GT1
--------->
RRTF1(1)
------
<----------
DOF2
<---------
DEAR4(2)
<-----
--------->
ARR11(3)
<---------
ATERF1(1)
------
<---------
ARR11(3)
<---------
ORA47(2)
<---------
TOE2(3)
<---------
ARR14(2)
--------->
ATHB12
--------->
ANAC46
<----------
DOF2
<---------
TOE1(3)
--------->
ARR14(2)
<---------
LBD16
<---------
DEAR3(1)
<---------
ANAC46
<-----
-
ARR10
------>
ZmHOX2a(1)
<---------
YAB1
<---------
LBD16
----------------->
AGL1
<--------
gagaaaaatcctctcttttttttctctctggattttgatttgagagaagatgaaacgcggcgcaaaaatttcctttcggagaaatttaagggtactttcg
16152300
--------->
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
-------->
ICU4
<---------
DAG2
<---------
AHL20(2)
---------
YAB1
<----------
DOF2
<---------
AHL20(2)
---
--->
YAB1
<---------
ANAC58
--------->
AHL20(2)
----------
----
ANAC58
--------->
ANAC55(2)
<------
ZmHOX2a(1)
--------->
AHL20(1)
--------->
ALFIN1
--->
ANAC55(2)
<---------
ANAC58
--------->
LBD16
<---------
AHL20(1)
<---------
ANAC58
----
ANAC58
<---------
ANAC58
<-----------
RAV1(2)
<---------
AHL20(2)
<---------
ANAC58
--
DOF2
<---------
ANAC58
<---------
LBD16
--------->
AHL20(2)
--------->
At4g35610
taattaatgagtttttttttttgcttacttatctgcttttttttgccccaggaataagacaacgtttttaatttatttccctaaatcagccgtgtcgcta
16152400
--------->
GLK1(1)
<---------
GLK1(1)
<---------
ARR14(2)
<------
NtERF2
--------->
LBD16
<---------
ANAC46
<------
NtERF2
<---------
LBD16
--------->
ALFIN1
<---------
bZIP60(2)
<---------
TGA1a
<---------
ANAC58
--------->
TGA1a
<---------
O2
--------->
O2
<---------
ANAC58
<---------
ANAC46
<---------
ANAC46
--------->
ANAC58
--------->
ANAC55(2)
----------->
GT1
--------->
ANAC58
<---------
ANAC55(2)
<---------
ZAT6
--------->
ANAC46
<---------
ANAC55(1)
------>
YAB1
--------->
STY1(2)
--------->
At4g35610
--------->
GLK1(2)
>
ID1
<---------
STY1(2)
<---------
At4g35610
--------->
YAB1
<---------
GLK1(2)
tcacaataaactgactagctacgagagtgtaaaatacagcttactcgctatgtgtataagaacatcagtgtctagattcttacgtggcggaaatcggata
16152500
<---------
ANAC58
------->
TEIL
<---------
ANAC58
<---------
ARR14(2)
<-------
MYC3
<-------
MYC4
------->
MYC3
<-------
MYC2
----------->
HVH21
------->
MYC4
<-----------
HVH21
----------->
GT1
<-------
MYC3
--------->
ANAC58
--------->
ZAT2
------->
MYC3
--------->
TGA1a
<---------
ZAT2
------->
MYC2
--------->
O2
<---------
At4g35610
--------->
TGA1a
--------->
ALFIN1
=====================
bZIP_DOF
<---------
ANAC55(2)
--------->
ANAC46
----------->
HVH21
--------
--------->
O2
--------->
ANAC58
--------->
bZIP60(2)
<---------
WOX13(1)
<--------
<---------
O2
--------->
ANAC58
--------->
ANAC58
--------->
ATHB12
--------->
RAP2.6(3)
--------->
ANAC55(2)
<---------
O2
<----------
DOF2
--------->
At4g35610
<---------
TGA1a
--------->
ALFIN1
--------->
CCA1(2)
<---------
YAB1
<---------
YAB1
gagagtagataacacgtgtatatgaacgcgagtgggatgaaataagagagacgcgtcacatgctttcgatgattgacagctgtaatatgcttagacggct
16152600
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AGI:
At5g40340.1
Description:
PWWP domain-containing protein. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14756.1); contains InterPro domain PWWP (InterPro:IPR000313)
Range:
from: 16148882
to: 16152144
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.