Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  ---                                                                                           <---------                                                           --------->YAB1                  --------->MYB52(1)                                                           <--------ATHB1                <---------AHL20(2)                                                          <---------ATHB12           <---------AHL20(2)                  ------->TEIL                            <---------YAB1            --------->AHL20(1)    --------->ARR11(3)                       --------->AHL20(2)                 ------>ZmHOX2a(2) <--    <-----------ARR10                        <---------AHL20(1)               --------->ARR11(3)-----    <---------ARR11(3)                       <---------AHL20(2)  --------->AHL20(2) <---------AHL20(1) --------->AHL20(2)                          --------->AHL20(1)--------->AHL20(2)   <---------ARR11(3) <---------AHL20(2)                   <----------DOF2     --------->ICU4      <---------ARR11(3)<----   aaataaaatcttatcaaatgtattttggtttatatgttagcttttattttattagtcacaatgatttttatatagaaaatgatctatatattttaacgga  15267900    <---------YAB1 <---------AHL20(2) --------->AHL20(2) <---------YAB1 ------>ARR11(3)                                                                                 <--- ------>AHL20(1)            <---------TOE2(2)                 <----------DOF2                    ---- --GT1                  --------->ZAT14                    <---------ARR11(3)              ---------- -------ARR11(3)        <---------ZAT14                --------->YAB1                ---------------- ---->ARR14(2)          <---------REM1(2)         <---------YAB1                 ------->MYC3    ---- -----ARR14(2)      --------->ANAC46           ---------->TaMYB80                <-------MYC3    <---   tatattattatgcaacttaaacactctacacaggtttaaacacttgtggaatatgagtcatgacctttacattttgttttgcatatggccaaatggaaaa  15268000                                      <---------ANAC58                              <------------CBF                              <---------ANAC58                         <---------DAG2<---------WOX13(1)                           ------->MYC2                        <---------ICU4      --------->ATHB12 ------ARR11(3)            <-------MYC3                        --------->ATHB12   <---------YAB1 ----->ARR11(3)            <-------MYC2                     --------->YAB1      <---------ANAC58 ->GT1                     ------->MYC3   <---------HSFB2a(2) <---------YAB1    <---------ANAC58 ->AGL1       --------->ANAC46<---------ANAC58      <-------TEIL    <-----------GT1<---------ICU4 ----->AHL20(1)         <---------ALFIN1  --------->HSFB2a(2) --------->ICU4    <---------AtLEC2 ------AHL20(1) --------->ANAC46      <---------ANAC58--------->TOE2(3)<----------DOF2   atatttctcacaacttacacaactcaacacatgcttgagtacttgtggaacatatacattagtcatgatttcactttattttgcatgattgccaaatgga  15268100                                           --------->AHL20(2)                                           <---------AHL20(2)                                         --------->AHL20(2)                                         ----------->TBP                                         <---------AHL20(2)                                       ----------->TBP                                       <---------AHL20(2)                                     <---------AHL20(2)                                     ----------->TBP                                   --------->AHL20(2)                                   ----------->TBP                                   <---------AHL20(2)                                 ----------->TBP                                 <---------AHL20(2)                                 --------->AHL20(2)                               ----------->TBP                               --------->AHL20(2)                             ----------->TBP                             --------->AHL20(2)--------->AHL20(2)                           --------->AHL20(2)  ----------->TBP                           ----------->TBP ----------->TBP                          <---------AHL20(1) <---------AHL20(2)                                  <---                          --------->AHL20(1) --------->AHL20(2)                                  ----                          <---------ARR11(3) ----------->TBP                              --------->TOE2(3)                     <------ZmHOX2a(2) --------->AHL20(2)                         >>>>>>>>>MYB2 -----                     ------------>CBF--------->AHL20(2)                  ------->TEIL   --------->ARR11(3)             <---------TOE2(3) <---------AHL20(2)                    --------->DAG2     <---------ARR11(3)       <---------------AGL15 <---------AHL20(2)<---------AHL20(2)   ---------->DOF2    <---------GLK1(2)   tgagtttttcttatcaaggatagatcaatatatatatatatatatatatatatatagagttttctcatcgtaaagtacctagaaaaccaaaatctcaaat  15268200             <---------------AGL15             --------------->AGL15            ------------>CBF         ---------->DOF2 --------->AHL20(2)                <---------YAB1 <---------AHL20(2)              --------->YAB1 ------AHL20(2)                 --------->ICU4                        --------->YAB1            <---- ----->AHL20(2)          ---------->DOF2                           --------->MYB52(1)       <-------- ---->AHL20(2) <------------CBF <---------ATHB12          ----------->GT1           <---------YAB1   ttataaattttaaaaccaattgaagcaaaaagaaatcatcaaagcttcaaaacatgaaatttgtgaaactaatggtcatcacatttgtgatagtcgtcat  15268300                                                      <-----------RAV1(2)                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                   --------->GLK1(1)                                                  <---------AGP1                                    -                                                  <---------ARR14(2)         <---------ATHB12     <--                                                  <---------ARR11(3)    --------->ANAC46         ----                                                  --------->ARR11(3)    --------->LBD16          ----                                                  <-----------ARR10    <---------ATERF1(2)     ------                                                  --------->ARR14(2)   --------->ATERF1(2)    -------                                                  --------->AGP1      <---------LBD16         <------                                                 <---------CCA1(2)<---------ANAC58            <------                                   <---------ANAC46<---------GLK1(1)  --------->RAP2.6(3)    --------                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -------->P       <------ZmHOX2a(1)                            <------NtERF2        --------->At4g35610 --------->MYB52(1)  <------ZmHOX2a(1) -----CCA1(2)           <---------O2    <---------ARR14(2)        <---------ANAC58 <-----------RAV1(2) ---HVH21  <---------YAB1 --------->ALFIN1   <-----------HVH21  <---------YAB1--------->YAB1 --------   atcatctctaattttgatcaaatcagaggtggcacagtcgtggattccatcagatctcaggctgctatgcttaccggcaatgaccacaggaggacaacca  15268400      <---------MYB46(3)   <------ZmHOX2a(1) <---------TOE1(3) <---------TOE2(3)                                                                                 -- -------->MYB52(1)                                                                              ----- -------MYB52(2)                                                                             -------- -->MYB46(1)                                                                                 -------- -->MYB83                                                                                 <---------ZAT2 ->GAMYB                                                                                  --------->At4g35610 -->MYB46(3)          <---------WOX13(1)                                                  --------->ZAT2 ---MYB52(2)        --------->ATHB12          <-------GAMYB                               <---------At4g35610 ---MYB55(2)   ------->GAMYB ---------->DOF2 <---------MYB46(3)                         <-----------RAV1(2) ->ANAC58     <---------ALFIN1               ----------->GT1      <-----------GT1<-----------GT1----- ->ANAC58   ----------->RAV1(1)   ---------->DOF2               --------->YAB1  <-----------GT1 -----   actaaggattgttgcaacacactgattgggcaaaaggaaagtttatgtggttacattacaaacccattatactatttgttttttacctctccagctgctc  15268500                                                                            <---------YAB1                                                                          --------->YAB1                                                                          <---------ICU4                                                                  <---------YAB1                                                                -------->ATHB1                                                                --------->ATHB51                                                                <---------ICU4                                                                --------->ATHB12                                                               --------->ICU4                                                               --------->AHL20(1)                                                               <---------AHL20(2)      <---------HSFB2a(2)                                      --------->AHL20(2)      --------->HSFB2a(2)------>ZmHOX2a(1)                     <---------YAB1      ------>ZmHOX2a(1) -------->DOF2          <---------ANAC58                    <---------AHL20(2)   --------->YAB1 ---->ANAC58            --------->TOE2(3)                   --------->AHL20(2) ------->TEIL ->ZAT2                 <---------ANAC58         --------->AHL20(1)       -------->HAHB4 ->At4g35610       --------->KAN4(1)             <---------ARR11(3)      <---------ATHB51 ---->ANAC58       <---------KAN4(1)   ---------->DOF2----------->GT1    --------->ICU4       <------ ---->ANAC46  ----------->GT1  ------>ZmHOX2a(1) <---------AHL20(1)    --------->YAB1  --------->TOE2(3)   gcaaagttttagaagtttgtaatattccttatcctacttgttaaagctcaatatatatgtaaaaaattattagtaataatgaatcctaatcttatataac  15268600                                                                     ---------->DOF2                                                    <----------DOF2--------->YAB1             <---------YAB1                         <---------DAG2<---------ATHB12    <-----------GT1             ----------->GT1           --------->AHL20(2)       --------->WOX13(1)   <---------YAB1        --------->YAB1                 --------->YAB1     <---------MYB46(3)    ------->MYC3 -----GT1 --------->ICU4              <---------ATHB12--------->ATHB12          <-------MYC3   aacatttcagtgatgatgttaatttttgagactggttccaataaaaacattgtgctttattggttccaatcaaaagaacacacgtttattactgttttct  15268700                                             --------->MYB52(1)                 <---------YAB1     --------->ANAC58                                                <             <---------AHL20(2)     --------->ANAC58                --------->ETT(2)                <           --------->AHL20(2)     ---------->DOF2                   <----------ID1              -----       --------->YAB1           <---------YAB1                      <---------ETT(2)       <---------GLK1(2)   atgtcttattcatattaatatgatgagtttaagtatgaaagcaaaacaaatggaatgctatttgtacaagtcgacaaaaaaaactgaaatatagattcct  15268800  Previous    Next  AGI:  At5g38197.1    Description:  similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G38195.1); similar to seed specific protein Bn15D80B [Brassica napus] (GB:AAP37973.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 15268254    to: 15268544    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.