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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At4g35610
<---------
ANAC46
<-------
GAMYB
--------->
ALFIN1
<------
MYB83
<---------
ANAC46
<------
MYB46(1)
<---------
AtMYB61
----------->
GT1
<-------
GAMYB
<---------
MYB46(3)
--------->
MYB111(2)
---------->
DOF2
<---------
MYB46(3)
--------->
SPL7
<--------
P
<---------
GLK1(1)
<---------
TOE2(3)
<---------
TOE2(3)
----------->
HVH21
<--------
P
--------
REM1(2)
<-----------
RAV1(1)
--------->
CCA1(2)
------------------------>
ANAC81
------
ETT(2)
--------->
ALFIN1
<---------
MYB52(1)
--------->
HSFB2a(2)
<--------
ctacacgatgaggttgttgtggtggagatgcgaccgtaagataaaggttggttaaatatcgagaatggataagagaaactcagagcttagagacacactt
9424800
<----------
DOF2
<---------
ICU4
--------->
CCA1(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
AGP1
<---------
GLK1(2)
---------->
DOF2
<---------
YAB1
<---------
ARR11(3)
--------->
ARR14(2)
--------->
WOX13(1)
--------->
GLK1(1)
------>
MYB83
--------->
ANAC58
--------->
YAB1
<---------
HSFB2a(1)
--------->
ANAC58
<---------
ICU4
<---------
GLK1(2)
------>
MYB46(1)
------>
ZmHOX2a(1)
-
ALFIN1
<---------
At4g35610
<------
ZmHOX2a(2)
--------->
GLK1(2)
<---------
ARR14(2)
--
gaacttcatcagtgatttagcaggcaatctaattggaatctcgatcatgagatccaaaggaatctttgccgaaaccaaatcgtctatttcttcctcttct
9424900
<---------
DAG2
<-----------
GT1
--------->
ANAC58
<------
ZmHOX2a(1)
----------->
HVH21
--------->
ANAC46
<-----------
HVH21
<---------
ARR14(2)
--------->
ANAC58
<---------
ZAT14
--------->
ARR14(2)
----------->
GT1
<----------
DOF2
--------->
SPL7
--------->
ZAT14
-------->
ID1
<----------
DOF2
--------->
AHL20(2)
<-------
TEIL
<---------
CCA1(2)
<-------
cgtcgtatttgacgactttttcttccattggaaaaaaaatagtctgagctttagacatacacatacggcatacccatagctcaactacagtgtcaaggac
9425000
<---------
AHL20(2)
--------->
ARR11(3)
<---------
ARR11(3)
---------->
DOF2
--------->
TOE2(3)
<XXXXXXXXXXXXXXXXXXXXX
MIR173
<---------
TOE2(3)
--------->
TOE1(3)
<-----------
GT1
----------->
GT1
---
ID1
<---------
CCA1(2)
--------->
ANAC55(2)
<----------
ID1
<--
aaaaccctaaacccacaaatctttgttacatttttttttgcaagggaacgtgataaaaaaaggtttaggctaatgggccaaagatgtaatgggcttagcc
9425100
--------->
GLK1(1)
--------->
ANAC58
--------
--------->
ANAC58
--------->
ARR11(3)
--------->
O2
<---------
GLK1(1)
<---------
ARR11(3)
<---------
O2
<------
ZmHOX2a(1)
--------->
GLK1(2)
------------>
CBF
<---------
bZIP60(1)
--------->
GLK1(1)
--------->
RVE1(1)
-------
MYB52(1)
--------->
bZIP60(1)
<-----------
HVH21
<---------
GLK1(2)
gtttaataaacaatcgatgagcttatttcagaaaacgacgtcgtagtaaggaactcccatcagagaaacccaaaaacccaaaatctctctctctatctct
9425200
--------->
ANAC58
--------->
ANAC58
----------->
HVH21
--------->
ANAC46
<------
NtERF2
------>
ZmHOX2a(2)
--------->
ALFIN1
<------
ZmHOX2a(2)
<---------
ANAC46
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR11(3)
<---------
ICU4
--------->
ARR14(2)
--------->
DAG2
<---------
ANAC58
<---------
ARR14(2)
----------->
RAV1(1)
---------->
DOF2
<---------
bZIP60(2)
<---------
AGP1
--------->
At4g35610
--------->
LBD16
<---------
ATHB51
--------->
AGP1
<---------
At4g35610
->
ZAT6
<------
ZmHOX2a(1)
<-----------------------
TaNAC69(2)
--------->
SPL7
atctcgcccgaggaaaagctccgata
atggcgtggatgcgactgatacagagcgcgagatctgttcttacgacagcaccagcgtcttcgactcttaactt
9425300
<---------
ALFIN1
<---------
At4g35610
<---------
GLK1(1)
------>
NtERF2
--------->
CCA1(2)
<---------
ATERF1(1)
<------
NtERF2
<---------
ALFIN1
<---------
ANAC46
--------->
DEAR3(1)
<---------
DEAR3(1)
--------->
LBD16
<---------
ANAC58
<--------
------>
NtERF2
<---------
LBD16
<---------
ANAC46
<--------
--------->
ANAC46
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR14(2)
--------->
LBD16
--------->
ARR14(2)
--------->
At5g28300
<---------
GLK1(2)
<---------
LBD16
<--------
--------->
ANAC46
------>
ZmHOX2a(1)
<---------
AHL20(2)
<-----------
HVH21
<--------
<---------
GLK1(2)
--------->
RAP2.3(1)
<---------
MYB52(1)
<---------
ANAC58
<---------
ARR14(2)
ccatagattctactccaaatccgccgctccttatcacg
gtaaaccgtttttatttgttcagattttgcgtcggagaaatgcggatgctaaacttgcgtgt
9425400
<-------
GAMYB
--------->
ALFIN1
--------->
MYB55(2)
<---------
WOX13(1)
--------->
MYB111(1)
--------->
ATHB12
--------->
MYB52(2)
<---------
ICU4
--------->
MYB111(2)
<---------
YAB1
<---------
MYB46(3)
--------->
ICU4
<--------
P
--------->
YAB1
<
<-------
GAMYB
--------->
ALFIN1
<---
-
ANAC55(1)
--------->
TOE1(3)
<---------
ANAC58
<------
-
ANAC58
--------->
TOE2(3)
<---------
ANAC46
<------
MYB46(1)
<-------
TEIL
<-------
GAMYB
-
ANAC58
<---------
MYB52(1)
<---------
ANAC58
<------
MYB83
<---------
ARR14(2)
<------
-
ANAC46
--------->
DOF5.7(2)
<-------
TEIL
<-------
TEIL
----------->
ARR10
------>
ZmHOX2a(2)
attggctgattcgttaccttagggttgttgcaagtttcatttgtgtggagattcatgattggtcttctcgtctgagtagattcagtttcagtgatcgtta
9425500
<---------
AHL20(2)
<---------
CCA1(1)
<---------
ARR11(3)
--------->
ARR11(3)
---------
YAB1
<---------
YAB1
<---------
TOE2(3)
--
------
YAB1
<---------
YAB1
<----------
DOF2
---------->
DOF2
---
MYB52(1)
<---------
ANAC46
<---------
WOX13(1)
<---------
ZAT6
---
YAB1
<---------
AtLEC2
--------->
ARR11(3)
--------->
ATHB12
<---------
RVE1(1)
<-
ttgttattcaaagtttgcaagtatttagggaagactaactattgagatgttgtgaatggtttttgattgctactttgagatttttttgtagtgaaagttg
9425600
<------
ZmHOX2a(1)
---
<------
MYB83
---
<------
MYB46(1)
<---------
ANAC58
<---------
MYB46(3)
--------->
LBD16
<---
<---------
ANAC46
------>
ZmHOX2a(2)
<---
<---------
ANAC58
<------
ZmHOX2a(2)
----
<---------
ANAC58
<---------
ARR11(3)
<-----
--------->
LBD16
<---------
AtMYB61
--------->
ARR14(2)
<-------
------>
ZmHOX2a(1)
--------->
ALFIN1
--------->
ARR11(3)
<--------
------->
GLK1(1)
<---------
WOX13(1)
<---------
ARR14(2)
----------->
HVH21
--------
GLK1(1)
<---------
ARR14(2)
--------->
YAB1
--------->
MYB46(2)
<---------
ANAC58
gaattcctgagtttttgagtggattggtggag
gagttgagactcatattgctaagcttgaaaccgagttaggcgatcttccgaaattgctcgtgactcgt
9425700
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AGI:
At5g26800.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05810.1)
Range:
from: 9425227
to: 9426420
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.