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Chromosome 1
Chromosome 2
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
====================
bZIP_DOF
=============================
<---------
ANAC46
--------->
O2
====================
bZIP_DOF
<---------
O2
--------->
bZIP60(1)
<---------
HSFC1(2)
--------->
HSFB2a(1)
--------->
MYB46(3)
<-----------
ARR10
<-
------>
MYB46(1)
<---------
ARR11(1)
<-----
------>
MYB83
--------->
GLK1(2)
--------
--------->
MYB46(3)
------->
TEIL
<-------
======================================
bZIP_DOF
<---------
TGA1a
<-------
--------->
O2
--------->
ARR14(2)
--------
--------->
GLK1(1)
--------->
AtMYB61
<----------
DOF2
--------->
TGA1a
------>
NtERF2
<---------
GLK1(1)
<---------
MYB46(2)
=============================
bZIP_DOF
------>
NtERF2
<---------
HSFB2a(2)
--------->
ANAC46
<------
NtERF2
<---------
HSFB2a(1)
--------->
LBD16
--------->
HSFB2a(2)
--------->
ZAT14
------>
NtERF2
<---------
ARR14(2)
--------->
ANAC58
<---------
LBD16
--------->
TGA1a
<---------
ANAC46
----------->
HVH21
--------->
ANAC58
<---------
LBD16
--------->
ANAC46
--------->
DEAR3(1)
--------->
HSFC1(2)
--------->
ANAC46
================================
bZIP_DOF
--------->
MYB52(1)
<---------
GLK1(2)
<---------
LBD16
<----------
DOF2
<---------
ALFIN1
<---------
ALFIN1
<---------
CCA1(2)
------>
ZmHOX2a(1)
---->
DOF2
--------->
LBD16
--------->
bZIP60(2)
<---------
LBD16
<---------
ARR14(1)
<----------
DOF2
<---
agcgcgattttcgggagaaatctctcccacttcaccaaaccatcaacaccggcgtctttcttccgaatcttccgacgtgataactttcctccgccagctt
8358500
<---------
MYB52(1)
<-----------
HVH21
------->
GAMYB
<---------
ALFIN1
<---------
MYB55(2)
<----------
DOF2
----------->
RAV1(1)
<-------
TEIL
<-----------
TGA1
--------->
ANAC46
=================
MYC_MYB
<---------
YAB1
--------
At4g35610
<---------
ICU4
------
HVH21
--------->
ANAC46
<---------
YAB1
--------->
ATHB12
->
At4g35610
--------->
DREB2C(2)
--------->
ICU4
<---------
YAB1
--
ZAT2
--------->
MYB46(3)
--------->
YAB1
<---------
MYB59
--
At4g35610
--------->
DEAR3(1)
<---------
ICU4
--------->
TOE1(3)
>>
->
ZAT2
<-----------
GT1
--------->
ANAC46
<-----------
GT1
--------->
TOE2(3)
>>>>>
--------
RAV1(2)
------>
ZmHOX2a(1)
--------->
YAB1
<----------
DOF2
<---------
ATHB51
caggtgctttaaccaccgtcacttcaactacttcctcgctactagtcattatcacaacacaaacacttagctttgaaaaacctaaatcgattattgaaga
8358600
<---------
ARR11(3)
--------->
At4g35610
--------->
AHL20(1)
<-------
---------->
DOF2
----------->
GT1
<---------
AHL20(1)
--------->
ARR11(3)
>>>>>>>>>
TBF1
------------>
MYB.PH3(1)
----------->
GT1
<---------
ARR11(3)
>>>>>>>
TBF1
---------->
DOF2
--------->
YAB1
<---------
ZAT14
---------->
DOF2
>>>>
TBF1
--------->
LBD16
<---------
ATHB12
--------->
ALFIN1
----------->
GT1
<-------
agaagaagaaagctccagagaaagagaaacagttacaaaacaaatcaaaatatttgtgagtggagagataaatgagaagagagcaaaaaaaagaacttta
8358700
------>
MYB46(1)
--------->
ORA47(1)
--------->
DEAR3(1)
<---------
SPL7
<---------
ANAC58
<---------
ANAC58
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR11(3)
<------
MYB83
------>
MYB83
----------->
GT1
<------
MYB46(1)
--------->
ARR11(3)
--------->
MYB55(2)
<---------
ARR11(3)
---------->
DOF2
--------->
DEAR3(2)
--------->
RVE1(1)
<---------
WOX13(1)
--------->
MYB46(3)
--------->
AHL20(2)
--------->
ATHB12
<---------
ANAC58
----------->
GT1
--------->
HSFB2a(2)
<---------
YAB1
<---------
DEAR3(1)
---
--------->
ALFIN1
<---------
HSFB2a(2)
--------->
ICU4
--------->
ALFIN1
----
<---------
YAB1
---------->
DOF2
--------->
GLK1(2)
<---------
MYB52(1)
<------
NtERF2
-----
--
DAG2
--------->
YAB1
----------->
GT1
--------->
RVE1(1)
--------->
MYB52(1)
<---------
MYB46(3)
<------
---
DOF2
<---------
ANAC46
--------->
CCA1(1)
<-----------
GT1
--------->
ALFIN1
-------
ttctttctataatagtgtggagaaaagaaaatatctagaaaaaatctagcgaatgttttaacggttatgattgaaagtgggtggcgaaccgaccatgatc
8358800
------->
MYC3
<-------
MYC3
========================================
<---------
O2
--------->
O2
--------->
TGA1a
<---------
TGA1a
<-----------------
PIF3(1)
--------->
ALFIN1
--------->
O2
--------->
TGA1a
<---------
O2
<---------
TGA1a
<---------
ANAC58
<---------
bZIP60(2)
<---------
ANAC46
>>>>>>>>>>
AtbZIP1
===============================
<---------
bZIP60(1)
<---------
ANAC46
--------->
bZIP60(1)
<---------
HSFB2a(2)
<---------
ANAC58
--------->
bZIP60(2)
<---------
MYB46(3)
--------->
CCA1(1)
<---------
TGA2(2)
--------->
TGA1a
------>
MYB52(1)
--------->
RVE1(1)
----------->
TGA1
--------->
O2
------->
HVH21
--------->
AHL20(2)
----------->
HVH21
--------->
REM1(1)
--------->
ANAC46
->
ZmHOX2a(2)
----------->
GT1
--------->
At4g35610
----------->
RAV1(1)
<---------
ARR14(2)
---
ARR11(3)
--------->
ARR14(2)
<---------
ARR11(3)
<-----------------------
TaNAC69(2)
--------->
ARR14(2)
-->
ARR11(3)
<---------
ARR14(2)
--------->
ARR11(3)
----------->
bZIP910(1)
--------->
At4g35610
----
taacggttgtggaaagagtatttggatttgaaaaaatatctagtagaattggctgacgtggccacgtttgccacat
cagcaaaatactgtatacgagaca
8358900
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
<----------
ID1
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
<------
NtERF2
------------>
CBF
<---------
MYB46(3)
--------->
CCA1(2)
<---------
RAP2.6(2)
<------
ZmHOX2a(2)
<---------
MYB46(3)
--------->
ARR11(3)
<---------
ANAC46
<---------
TOE2(3)
<---------
ARR11(3)
<---------
bZIP60(2)
<---------
TOE1(3)
--------->
AGP1
<---------
AtMYB61
---------->
DOF2
<-
<---------
GLK1(1)
--------->
ALFIN1
<---------
AHL20(2)
--------->
GLK1(1)
<---------
TOE2(3)
<---------
ANAC46
<-----------
TBP
--
=======
bZIP_DOF
<----------
DOF2
<---------
ANAC46
<-----------
RAV1(1)
<-----
=======
bZIP_DOF
<-----------
GT1
<------------
CBF
<---------
MYB52(1)
<-------
TEIL
------
------>
DOF2
<---------
MYB52(2)
<---------
AHL20(2)
<----------
DOF2
----------->
GT1
-------
aaagagatccaatacgccaaataaccttcttttaagaaaaaattggtgtggtggctagcctttggtttttctatgtggttcatatttaaagttggattta
8359000
<---------
DAG2
<----------
DOF2
<---------
TOE2(3)
<-----------
GT1
------------>
CBF
--------->
YAB1
<------------
CBF
<---------
YAB1
<---------
ICU4
<-----------
GT1
--------->
ATHB12
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
YAB1
<----------
DOF2
--------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC58
------->
AHL20(2)
--------->
AHL20(1)
--------->
ARR11(3)
-------
----
AHL20(2)
<---------
ARR11(3)
------->
TEIL
----------->
GT1
<<<<<<<<<<
GT-3b
--->
AHL20(2)
<---------
AHL20(1)
--------->
ANAC55(2)
--------->
ICU4
<---------
ANAC58
---------
-->
AHL20(2)
<---------
MYB59
<------------
CBF
--------->
AHL20(2)
<---------
AHL20(2)
attttttattatactttaccaaaatatttattgcaattgatgtttatgtatttgtgatggagaaatatttagtgaatttcttgtttatttttcttttaat
8359100
--------->
ZAT6
<---------
AHL20(2)
<------
ZmHOX2a(2)
<---------
YAB1
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
ANAC55(2)
<---------
AHL20(2)
<---------
YAB1
===
-->
YAB1
--------->
ANAC46
<---------
ANAC55(2)
<----------
DOF2
<---------
AHL20(2)
<--
>
AHL20(2)
<------------
CBF
<-----------
GT1
------->
TEIL
<------
aagagatcaacactaaacattgaaactattacttatttgatgcttctaaattttacttttattttaaaatgtattttatattattgttcagacattttag
8359200
--------->
ARR11(3)
=================
bZIP_DOF
--------->
CCA1(1)
--------->
TGA1a
--------->
AHL20(2)
<---------
ANAC58
--------->
O2
------>
MYB46(1)
<---------
ANAC58
<---------
ALFIN1
--------->
AtMYB61
--------------->
AtSPL8
<---------
TGA1a
<---------
MYB46(2)
<---------------
AtSPL8
<---------
O2
<---------
MYB59
--------->
GLK1(2)
=================================
bZIP_DOF
<---------
MYB111(1)
<---------
ZAT6
--------
DOF2
<---------
AHL20(2)
<-----------
GT1
--------->
RVE1(1)
--------->
DAG2
-----
GT1
--------->
YAB1
<----------
DOF2
------>
MYB83
<---------
ARR11(3)
---------->
DOF2
cttttgagtacctataaaaatcccactcgtgacttttgggataataccaaacccaaaaaatatctaatgctagtgggaaaaagtatctatacaaatttat
8359300
<---------
AHL20(2)
<-------
TEIL
--------->
AHL20(2)
<------
MYB83
<---------
AHL20(1)
----------->
GT1
<---------
CCA1(1)
<------
MYB46(1)
<---------
RVE1(1)
--------->
MYB46(2)
<---------
ARR11(3)
<---------
MYB46(3)
--------->
ARR11(3)
--------->
MYB59
----------->
GT1
--------->
MYB111(1)
<---------
TOE2(3)
<-----------
GT1
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(2)
<---------
AHL20(2)
<-----------
GT1
--------->
YAB1
<---------
MYB52(1)
<---------
AHL20(2)
<------
ZmHOX2a(1)
ccaaaaacaattgtattattttctgtttggtacataggtttgcaatttgtttattttaaaaacaataaggatatttcaattttttttcacataagaaaat
8359400
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AGI:
At5g24470.1
Description:
APRR5 (PSEUDO-RESPONSE REGULATOR 5); transcription regulator. Identical to Two-component response regulator-like APRR5 (APRR5) [Arabidopsis Thaliana] (GB:Q6LA42;GB:Q9FGE3); similar to APRR9 (PSEUDO-RESPONSE REGULATOR 9), transcription regulator [Arabidopsis thaliana] (TAIR:AT2G46790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48570.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain CCT (InterPro:IPR010402)
Range:
from: 8355954
to: 8358876
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.