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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
MYB83
------>
MYB46(1)
----------->
RAV1(1)
--------->
MYB46(3)
--------->
TGA2(2)
--------->
ANAC46
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
--------->
bZIP60(1)
--------->
ANAC58
--------->
bZIP60(2)
--------->
ANAC46
<---------
TGA2(1)
<---------
ANAC55(2)
<---------
bZIP60(1)
--------->
ANAC55(2)
============================
<-------
TEIL
--------->
ANAC58
--------->
CCA1(2)
--------->
TGA1a
--------->
ARR14(1)
<---------
TGA1a
<---------
GLK1(2)
--------->
TGA2(1)
--------->
ARR14(2)
<-----------
STF1
<---------
ARR14(2)
<------
ZmHOX2a(1)
-------
<-------
TEIL
--------->
ARR11(1)
<---------------
AtSPL3
<------
<-------
MYC3
<---------
ARR14(2)
========================
bZIP_DOF
<-------
------->
MYC3
----------->
ARR10
---------->
DOF2
<-----------
HVH21
--------
attcacatgcatatatagatagatacgcaaaagaaaaattgtatacagagagagagaagggaaaagagagagaggacgtcac
caacatattggcaatggt
7369900
--------->
ZAT2
<---------
ZAT2
------->
GAMYB
<-------
GAMYB
==========
MYC_MYB
<---------
ANAC46
----
-->
ATHB12
<---------
GLK1(1)
----
---
MYB46(3)
<---------
HSFC1(2)
<---------
ARR14(2)
<---------
At4g35610
--
ATHB12
<---------
HSFB2a(1)
---------->
DOF2
--------->
ARR14(2)
--------->
At4g35610
->
ICU4
--------->
HSFC1(2)
--------->
ANAC46
<------
ZmHOX2a(1)
------->
TEIL
---------->
DOF2
tgcaacggagattgagagaggcttcgatgggctcttctacgacaaagagaagaacatagagaggatttggatttcgttgaatctcgagctgaaaagacca
7370000
---------->
DOF2
--------->
GLK1(1)
<---------
At4g35610
<-----
--------->
At4g35610
--------->
ZAT2
<---------
GLK1(1)
<---------
At4g35610
--------->
ZAT2
<---------
ZAT2
<---------
ZAT2
------>
MYB83
--------->
At4g35610
<---------------------
WRI1
---------->
DOF2
<-----------
RAV1(2)
-->
MYB46(1)
--------->
LBD16
------>
MYB46(1)
<---------
HSFB2a(2)
--------->
At4g35610
-->
MYB83
<---------
LBD16
<---------
MYB59
--------->
HSFB2a(2)
<---------
At4g35610
acttcccattagaccggagctctcaaagtgaccaaactcaagtagtttagcgaggttatctcgaaaagacaactcgttcatctcagctggatgtccagac
7370100
--------->
ANAC58
--------->
ANAC58
<-------
TEIL
--------->
ARR14(1)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
MYB46(3)
<---------
ANAC46
--------->
ARR11(1)
<-----------
RAV1(1)
<---------
GLK1(2)
--------->
SPL7
<----------
DOF2
<---------
DEAR3(2)
--------->
DEAR3(1)
------->
TEIL
<----------
DOF2
------>
ZmHOX2a(1)
<---------
At4g35610
----------->
ARR10
----
GLK1(2)
--------->
TOE2(3)
<---------
ALFIN1
--------->
ARR11(3)
--------->
YAB1
----
tctccgaacgtcttcagcctaaaaactctactttcccctctcttcctcttctttggaatatgttgctgatggtctgttcgaatcagattcgccat
cgaat
7370200
------>
ZmHOX2a(2)
<---------
MYB46(3)
===========================
HOX2a_HOX2a
--------->
MYB52(2)
<---------
ARR11(3)
--------->
ATHB12
<<<<<<<<<<
MYB80
--------->
YAB1
<------
MYB83
<---------
AHL20(2)
<-
<------
MYB46(1)
--------->
ARR11(1)
----------->
GT1
*
TSS
>>>>>>>>>
SARD1
<---------
WOX13(1)
<---------
YAB1
-------
>>>>>>>>>
CBP60g
<---------
YAB1
--------->
AHL20(1)
---------->
DOF2
----->
YAB1
--------->
ARR11(3)
<------
ZmHOX2a(1)
<---------
AHL20(1)
--------->
YAB1
--------->
DAG2
cagaaatttggtttgatcttgagaagagagggaataggaatatgatagatttggatatatattatgatggggtttgttataagaagagaccgaaaagt
gt
7370300
<---------
TOE2(3)
<----------
DOF2
--------->
CCA1(2)
------------>
CBF
--------->
DAG2
<---------
TOE2(3)
--------->
ICU4
--------->
ANAC58
---------->
DOF2
<------
ZmHOX2a(1)
<---------
ARR11(3)
--------->
ANAC58
<----------
ID1
--------
TOE2(3)
--------->
ARR11(3)
<---------
YAB1
<---------
ICU4
---------->
DOF2
-->
ALFIN1
<---------
TOE1(3)
--------->
ICU4
<-----------
HVH21
<---------
YAB1
------
tgaggaagtgtgttaagggtttagagatatagtagtcattaagatgatggtcacacaattagtgctttgtggtgatgaaaaggaaaagtgagtgagagaa
7370400
--------->
TOE2(3)
<---------
YAB1
----------->
GT1
--------->
At5g28300
--------->
ATHB12
<------
MYB83
<-------
TEIL
--------->
TOE1(3)
----------->
GT1
>>>>>>>>>>>>>>>>>
LFY
--------->
ARR11(3)
<---------
ANAC58
<---------
AHL20(2)
<-----------
GT1
<------
MYB46(1)
<---------
ANAC46
<------
----------->
GT1
<-----------
GT1
--------->
MYB59
<---------
AtLEC2
<---------
DAG2
---->
DOF2
--------->
AHL20(2)
<---------
ICU4
<---------
MYB52(1)
<---------
ANAC58
<----------
DOF2
agagaaaggttaattaaactgtgaattaacaattgttaccattggattgtatgttaggtcttgatatgtgcatgacttgtaacattaacaacttttcttt
7370500
<-----------
GT1
--------->
AHL20(2)
<---------
ICU4
<---------
ATHB12
<---------
ATHB51
--------->
AHL20(2)
<---------
HSFB2a(2)
<---------
AHL20(2)
<-----------
ARR10
--------->
ICU4
<---------
CCA1(2)
--------->
HSFB2a(2)
----
DOF2
<---------
AHL20(2)
<---------
YAB1
--------->
HSFB2a(2)
<
cttagccaaataattaactatttttcaaaaaaacattcaaacccttcttattcccaaatctaatttcatttctaaaaatacttctgtaatattcgaaact
7370600
<---------
ANAC46
<---------
ANAC58
<---------
bZIP60(2)
<---------
O2
<---------
TGA1a
----------->
HVH21
------->
MYC3
<-------
MYC3
--------->
ANAC55(2)
--------->
ANAC58
--------->
TGA1a
<---------
ANAC58
<---------
bZIP60(1)
<---------
O2
<---------
bZIP60(2)
--------->
bZIP60(2)
--------->
bZIP60(1)
--------->
ANAC58
--------->
O2
==================
HOX2a_HOX2a
<------
ZmHOX2a(2)
<---------
ANAC58
--------->
ARR11(3)
<---------
ANAC46
<---------
ARR11(3)
<---------
TGA1a
--------->
AtLEC2
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC46
<---------
ANAC58
<-------------
DYT1
<---------
AHL20(2)
<---------
ANAC46
------------->
DYT1
--------->
AHL20(2)
<---------
ANAC58
<-----------
HVH21
--------->
YAB1
----------->
HVH21
=======================================
bZIP_DOF
--------->
YAB1
--------->
ANAC55(2)
---------->
DOF2
<------
ZmHOX2a(1)
---
----------->
GT1
------->
TEIL
<---------
ANAC55(2)
==================================
bZIP_DOF
---------
WOX13(1)
<-------
TEIL
--------->
GLK1(2)
--------->
ANAC58
--------->
ALFIN1
<---------
ANAC58
ggattgataattttaatacatatacatgtatttgtgtaagaatatgtgacaaatggcatgcaaaaagatcgagggtgaggaatgtcacgtgacttgggaa
7370700
--------->
YAB1
<---------
ICU4
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
AHL20(2)
<-------
TEIL
--------->
AHL20(2)
--------->
AtLEC2
<---------
MYB52(1)
=
--------->
ARR11(3)
--------->
ANAC58
<-----------
GT1
<---------
<---------
ARR11(3)
--------->
ANAC58
--------->
YAB1
--------->
LBD16
<--
----------->
GT1
--------->
ICU4
<---------
At4g35610
--------->
GLK1(2)
<---------
ANAC46
---
------>
TOE1(2)
<---------
AHL20(2)
------->
TEIL
---------->
DOF2
<---------
ANAC55(2)
-
catgagaagataatataataaaataatgaagacatgcatttgagcttctcacatttttaaagaatcagattaactctgtgttccgtcaatttctgtcatg
7370800
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AGI:
At5g22260.1
Description:
MS1 (MALE STERILITY 1); DNA binding. similar to MMD1 (MALE MEIOCYTE DEATH 1), DNA binding [Arabidopsis thaliana] (TAIR:AT1G66170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42422.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011)
Range:
from: 7367638
to: 7370298
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.