Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->MYB111(1)           --------->ATHB12        --------->MYB46(2)          <---------WOX13(1)        >>>>>>>>>>AtMYB44           <--------P        --------->MYB52(2)         <-------GAMYB        ----------->GT1           --------->MYB55(2)        --------->MYB59           <---------MYB46(3)      <---------MYB52(1)      --------->ALFIN1     ------------>MYB.PH3(2)  <---------AtMYB61 ------>DOF2 --------->ANAC55(2) --------->ALFIN1 ----YAB1    <---------ANAC55(2) <---------AtMYB61            --------->ATHB12 ----ANAC55(2)       <---------AtLEC2<---------MYB46(3)   <---------ARR14(2) --->ANAC58 <-------TEIL     <------ZmHOX2a(1)            --------->ARR14(2)                   <----- --->ANAC58<-----------GT1<-----------RAV1(2)  <---------AHL20(2)                            --------   aaagcatagttagttacatatttccatggcaggaggtggttgatgggattttttttggcagaactgatttgagtttcaatagacaattctatggctagaa  5927000                 <---------YAB1        <---------ATHB12      <---------AHL20(2)              --------->GLK1(2)                                             <     --------->AHL20(2)        <---------ANAC58                                               <------    <---------YAB1    <---------ZAT14--------->WOX13(1)                                      -------- ----GLK1(2)  --------->GLK1(2)<---------ANAC58                                        ---------->DOF2 --->ARR10<-----------GT1    <---------YAB1               --------->ICU4  <---------AHL20(2) <-------   tcgcttattatataacattctgaatacagtgatgcttgccaatctagattagtatttgtaagaatggaatctatattttataagactgcaaaagactgtt  5927100                                  <-----------GT1         --------->LBD16                          <-                              <---------ICU4             <---------HSFB2a(2)                   <-----                              --------->ATHB51           --------->HSFB2a(2)             --------->ARR14(2)                --------->ZAT6<--------HAHB4            <---------LBD16                  --------->ARR11(3)    --------->ZAT6           <---------YAB1           --------->GLK1(2)                  --------->GLK1(2) ---------MYB52(2)       <---------ARR11(3)       --------->AHL20(2)                     <---------ARR14(2) -GAMYB       <-----------GT1--------->ICU4       <---------AHL20(2)                    --------->RVE1(1) --->GT1   <----------DOF2 --------->YAB1   --------->AHL20(2)                        --------->AHL20(2) --ZAT6 <---------ARR11(3)<---------YAB1    <---------AHL20(2)                  <xxxxxxxxxxxxxxxxsmallRNA(i)   aaactaacactatcttttacacttcgatatcattattaactggaatttaaatttaaattctggagaagtttgcaccaaaaaaaaaaaaaaaaatctggtg  5927200                                                                                                -----                                                                                              -------                                                        --------->YAB1                    <---------At4g35610           --------->MYB59                              --------->AHL20(2)         <---------AHL20(2)       <------MYB83                                    <---------ATHB12            <---------ATHB51       <------MYB46(1)                            ----------->GT1              --------->AHL20(2)      --------->MYB59                         --------->DAG2                   <---------AHL20(2) --------At4g35610                           ---------->DOF2        --------->YAB1 --------->AHL20(2) ----REM1(1)                           ---------->DOF2 <---------ATHB51     ------->TEIL  --------->At4g35610   aagctaatttggttagataacaaatttcagaaaatacaaacaaaagtaaaagtggcaataatatgcaaaattagaatgaatttaaataattctgccgaaa  5927300                        ----------->GT1                      <---------At4g35610                      --------->At4g35610                 --------->ANAC58                 --------->ANAC58                 --------->ANAC46                <-------TEIL               --------->ARR14(1)              <-------TEIL               --------->CCA1(2)    <---------RAP2.6(3)              --------->ARR11(1)    ------>NtERF2              <---------ARR14(2)   <---------ETT(1)        --------->REM1(1)          --------->DEAR3(1)                 <<<<<<<<<TBF1 --------->ANAC46    ----------->GT1---------->DOF2 --------->RAP2.6(2)    <---------ALFIN1          --------->ANAC58   <---------------AtSPL8  ---------->DOF2----------->RAV1(1)   <---------At4g35610 --------->ANAC58- ------>GT1   --------->ARR14(2)  --------->DEAR3(2)     <---------ZAT18    <<<<<<<<<TBF1          <- --->DOF2----------->RAV1(1)     --------->At4g35610     --------->ZAT18 <<<<<<<<<TBF1     <---------   gtaaaatggtacaacagatacgaaagctgtaaagaagccgacaacaacatacacattagcccactctgcttcttcttcttcttcgctcgccatctttttt  5927400                                                                             <-----------HVH21                                                                            <---------TGA1a                                                           <----------DOF2  --------->ANAC58                                                 --------->ANAC58           --------->ANAC46                                                 --------->ANAC58           --------->ANAC58                                                 <---------ANAC55(2)        <---------O2                                                 --------->ANAC55(2)        --------->TGA1a                                                <-------TEIL                --------->O2          <---------ATHB12                  --------->MYB59===========================bZIP_DOF       <---------WRKY38(1)                  <---------------AtSPL3          --------->bZIP60(2)    *TSS--------->WOX13(1)                  <---------------AtSPL8  <---------ANAC58 <---------ATERF1(1) -------->ATHB12                            --------------->AtSPL3  <---------ANAC58 <-----------HVH21 --------YAB1                             <---------MYB52(1)   <---------AtLEC2      <---------SPL7 -DOF2--------->WRKY18(1)           --------->MYB46(3)  ------>NtERF2     <---------ALFIN1<---------ALFIN1   tttgattagtcaaccattttcttctctctccaatttcaacctctgtaaggtacgtctccgactttccatggcttccccacgtctcgtcgtcccctctctt  5927500                                                              <---------YAB1                                                             ------>ZmHOX2a(2)                                                             ==================HOX2a_HOX2a                            <----------DOF2                 --------->At4g35610                           ------>ZmHOX2a(2)                <---------At4g35610                         <---------ARR11(3)                <---------ARR11(3)                         --------->ARR11(3)              <---------MYB52(1)      --------->MYB52(2)                      <--------P                        --------->LBD16  -------->P              <---------ANAC58                        <---------LBD16    ------>MYB46(1)<---------ZAT14              <---------ANAC58                    <---------ARR11(3)     ------>MYB83 --------->bZIP60(1)    <---------ANAC58  <---------WOX13(1)          --------->ARR11(3)    ------>ZmHOX2a(1)    <---------ANAC46 <-------GAMYB               <---------CCA1(2)     <---------MYB111(2)    <---------ANAC58<---------MYB46(3)        <---------AHL20(2) <---------WOX13(1)   <---------bZIP60(1)  <-----------GT1  <---------AtMYB61         --------->AHL20(2)--------->ATHB12<--------P  --------->ANAC46   aattttgcgtttcatttcgttttggttgatcttttttttgaatttgattttatatctccgtgatctgattgctcctacctggttagtgacttcacaaaac  5927600                                                    ------>ZmHOX2a(2)                                                   <---------At4g35610                                              --------->TOE2(3)                                             ------>ZmHOX2a(2)                                      --------->ARR14(2)                                      <---------ARR14(2)                <----------DOF2                                   --------->HSFB2a(2)        <---------ICU4                    <---- <---------GLK1(2)<---------AtMYB61<---------HSFB2a(2)  --------->GLK1(1)        <------NtERF2 ------ --------->ARR11(3)               <---------LBD16 <---------ARR11(3)    <---------DAG2    --------->TOE2(3) <---------ARR11(3)            <---------GLK1(1)  <---------AGP1     <-----------GT1 --------->WRKY38(1)   atagatttttgtttattgttttggtttcattcgatttctggatttgatccttgatctgatttcaaaattattcactttctggcctcgttgagccttagat  5927700                                          --------->TOE2(3)                                        <---------ARR11(3)                                        --------->ARR11(3)   ------>ZmHOX2a(2)                                       <---------GLK1(1)   --------->ARR11(3)                                       <---------CCA1(2)   <---------ARR11(3)            <---------AHL20(2)    --------->TOE2(3)      <---------ANAC58           --------->YAB1   --------->AHL20(2)<---------YAB1<------ZmHOX2a(2) --ZmHOX2a(2)          ----------->RAV1(1)--------->YAB1 <---------ANAC58 --->AGP1  --------->AHL20(2)<---------AHL20(2)     <-----------RAV1(1)                             -   ccaattctttctattatatcggagacaacatttaatccttgatatcttaatattgtgttgcgatcttaagtttttgattttgaattgaattagactcatc  5927800                        ----------->GT1                       <---------YAB1                            --------->ICU4                       <----------ID1     <---------ICU4    --------->YAB1               --------->TOE1(3)          --------->ATHB12  --------->ANAC55(2)            <---------CCA1(2)            <---------YAB1    ---------->ID1       ----------->HVH21 --- --------->ID1 --------->TOE2(3)<---------MYB52(2)  <---------YAB1 --------->TOE2(3)  ----------->GT1   ttgttgtttttctcaaatcttaaatacgataaaaactaacttcatcatttgattctgatttttcgtaattcttaatacagagacgacctggaaaaatata  5927900  Previous    Next  AGI:  At5g17900.1    Description:  similar to microfibrillar-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G08580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43282.1); contains InterPro domain Micro-fibrillar-associated 1, C-terminal; (InterPro:IPR009730) Range:  from: 5924709    to: 5926903    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g17910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G29620.1); similar to hypothetical protein [Glycine max] (GB:BAB41198.1) Range:  from: 5927404    to: 5932724    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.