Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->MYB52(1)                                      --------->At4g35610                                ------>MYB83                                      --------->ZAT2                                   <---------MYB111(1)                                    <-----------RAV1(2)                                --------->MYB46(3)                                   <------ZmHOX2a(2)                                   <---------MYB46(2)                                  <---------ARR11(2)                                 ------>MYB46(1)                                  <---------ARR14(2)                                 ------>MYB83                                  <---------GATA12                                  --------->MYB55(1)                                  --------->GATA12                                 <---------MYB59                      --------->ARR11(3)                                           <---------MYB111(1)                      --------->GATA12<---------ZAT2                               <---------MYB46(2)                      --------->ARR14(2)                                           --------->AtMYB61                      <---------ARR14(2)                                          --------->MYB46(3) --------->YAB1       <---------GATA12----------->RAV1(2)             --------->WRKY38(1)------>MYB46(1) --------->AHL20(2)   <---------ARR11(3)                            <---------At4g35610<---------MYB111(2) ------>YAB1<---------ARR11(3)    <---------RVE1(2)                 <-------GAMYB------>MYB83 ->MYB83    --------->ARR11(3)    --------->ARR11(2)                --------->At4g35610<---------MYB59 ->MYB46(1) --------->GATA12      --------->ARR14(2)    <---------AHL12(1)       ------>MYB46(1) ----->RAV1(1)       <---------CCA1(2)<---------At4g35610  <---------YAB1        -------->P   <------ ->MYB46(3) <---------GATA12    ----------->ARR10  <-------TEIL    <---------MYB46(3)-------->P   caataaaaacacaagatttactcaaatcttcaagtagatcagctgaaacaaggttcaatttttcattgtctgttgactaatccaacctaccaaacagaaa  5866300                                                                                               <-----                                                                                    <---------ARR11(2)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                 <---------ANAC58                                               --------->DOF5.7(1)         <---------KAN1     <------                         --------->ATHB12      <----------ID1             ------->TEIL<---------ANAC46                        <---------YAB5       ---------->DOF2          ==============================HOX2a_HOX2a                        <---------YAB1    --------->LBD16             <------ZmHOX2a(2)      <------ZmHOX2a(1)                        --------->ICU4   --------->HSFB2a(2)         --------->GATA12 <---------ANAC58    --------->TOE2(3)<-------TEIL        <---------HSFC1(1)          <---------GATA12 <---------ANAC58 ---GLK1(2)     ---------->DOF2          <---------HSFB2a(2)--------->AHL20(2)   <---------ANAC58   cttttgcctcaatctatccaaagttcatgatttggattgaattccagaaaagacaaattgaatgaaatagagatcgaacctctgcgtttcttggaggatg  5866400                              --------->ANAC58                             <------NtERF2                       <------ZmHOX2a(2)                            ------>NtERF2                       <---------ARR14(2)                           --------->DEAR3(1)                   <---------ARR11(3)                          <---------------------WRI1            --------->ARR11(3)                         ------->GAMYB                          --------->RVE1(2)                       ------>MYB83  --------->MYB52(1)    ----------->HVH21                       ------>MYB46(1)                   --------->At4g35610                      --------->MYB52(1)                 <---------KAN1                     --------->DEAR3(1)                 <---------ARR14(2)                     --------->AtMYB61                  --------->GLK1(2)                 --------->At4g35610<----------ID1      --------->ARR14(2)                --------->ANAC58  --------->ANAC58      <---------GATA12                --------->ANAC58  --------->ANAC58      --------->RVE1(2)                       <----        --------->At4g35610<---------DEAR3(1)          <---------GLK1(2)                <---------ARR11(2)   <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          ---------->DOF2       <-------TEIL   <---------ARR14(2) --------->AHL20(2)  --------->MYB46(3)        --------->ANAC46 --------->GATA12        --------->ARR11(2) ----KAN1    ----------->RAV1(1)---------->DOF2--------->ANAC58 --------->ARR14(2)      --------->ARR14(2) ---GATA12 --------->At4g35610--------->ANAC58 --------->ANAC58 <---------GATA12--------->KAN1  <----   taagaaaataagcagcaccagcaccaacggcgacgaaagcaacgaagacacccaaaagaatctgacgatctagggttcggagaaactcggtatccatggc  5866500                                                                                    --------->RVE1(2)                                                                                  --------->AHL12(1)                                                                          <------MYB46(1)                                                               --------->DOF5.7(1)<---------AHL12(1)                                                          ----------->GT1<---------AtMYB61                                                          <----------ID1 --------->ALFIN1                                                         ----------->GT1 <---------MYB46(3)                            ----------->GT1             --------->DOF5.7(1)  ----------->GT1                          ---------->DOF2              --------->DOF5.7(1)<------MYB83 -----ANAC58          >>>>>>>>>TBF1                   ---------->DOF2  <---------ARR14(2) -----ANAC58  ---------->DOF2                     ----------->GT1      <---------ARR11(2)   <--------   ttctcttaacccaaatgaaaggaagaagaaaagtataaaactagcttaagaattgtaaaagggaaaaaatggggattggtggaaaaaatcagagctttga  5866600                                                                 <---------ALFIN1                                                               -------->P                                                               ------>MYB46(1)                                                               ------>MYB83                                                              --------->MYB55(1)                                                   <------ZmHOX2a(2)                                                  <---------RVE1(2)                                                  --------->GATA12                                                  <---------ARR14(2)                                                  <---------GATA12                                  --------->AHL20(2)         <---------MYB59                                  <---------AHL20(2)       <---------GATA12                                  --------->AHL25(1)       --------->GATA12                                  --------->AHL20(3)     --------->ETT(2)                                  <---------AHL25(1)    <--------P                            --------->LBD16       <---------ARR11(2)                            ------>NtERF2         --------->ARR14(2)                           --------->ANAC46       --------->ARR11(2)                               <-                --------------------->WRI1        --------->ARR11(3)<----------DOF2              ----           <----------DOF2<---------LBD16   --------->ALFIN1 <---------MYB111(1)           <--------- --DOF2   <---------DOF5.7(1)     <---------AHL20(3)------>ZmHOX2a(2)                     <---------DOF5.7(1)   attggagttgtctctttcccttgtaatctccgccattaaaatgagggtatgggatctggtagacctaccactttcacgttgtatagtttgcctcttttgc  5866700                                                            <---------AHL20(3)                                                            --------->AHL12(3)                                                            --------->AHL25(2)                                                            --------->AHL20(3)                                                            --------->AHL12(2)                                                            <---------AHL25(2)              ---------                                                          --------->AHL25(3)    --------->RVE1(2)                                            <---------AHL25(2)                  <-----------ARR10                                            <---------AHL25(3)                  --------->ARR14(2)                                            --------->AHL12(3)                 --------->RVE1(1)             --------->WOX13(2)             <---------AHL20(2)                <---------AHL25(2)           *TSS                             --------->AHL25(2)                --------->AHL25(2)       <---------ICU4                       <---------AHL12(3)               <---------AHL12(2)       --------->KAN1                       --------->AHL25(1)               --------->AHL12(2)      <---------YAB1                        <---------AHL25(1)               --------->AHL12(3)     <---------AHL25(2)                    --------->AHL25(2)                <---------AHL12(3)     --------->AHL20(3)                    <---------AHL12(1)              --------->AHL25(1)     --------->AHL12(2)                    --------->AHL25(1)              --------->AHL20(2)     --------->AHL25(2)                    --------->AHL12(1)              --------->AHL20(3)     <---------AHL20(3)                    --------->AHL25(3)              <---------AHL20(3)  <-----    <---------ICU4                         <---------AHL20(1)       ---------->DOF2     <---------DOF5.7(1)   <---------YAB1                          --------->AHL20(2) <---------AHL12(1)<---------ARR11(3) <-   --------->ICU4                          <---------AHL25(2) --------->AHL12(1)--------->ARR11(3)--- --------ALFIN1    <---------AHL20(1) ------------>CBF    <---------YAB1   <---------AHL12(3)  ------ ------->RAV1(1) <---------TOE2(3)  <-----------GT1     --------->YAB1----------->GT1  <---------MYB52(1) -DOF2<---------AHL12(2)   <-----------GT1 <---------AHL20(2)<---------AHL12(2)--------->CCA1(1) ----   aacacattattattccattaacatatttgttacatttttgaccaatttttttttcttagtataatttttctaaagaaaaaaatatcttcgttttttcaat  5866800                                                                                          ------->TEIL                                                                            <---------AHL12(2)                                   --------->MYB52(1)                      <---------AHL25(3)                                   ----------->RAV1(1)                     <---------AHL25(2)                                   ------>MYB46(1)                         <---------AHL12(3)                                   -------->P                              --------->AHL25(2)                                  <---------ALFIN1                         <---------AHL12(2)                                  --------->MYB55(1)                       --------->AHL12(1)                                 <---------MYB111(2)                       <---------AHL12(1)                                 --------->DEAR3(1)                       <---------AHL25(2)                                 --------->MYB46(3)                       --------->AHL12(1)                          --------->YAB5                                  <---------AHL12(1)          <---------At5g28300    <---------MYB55(2)                       --------->AHL25(2)      <---------ZAT6   --------->WOX13(1)                      <---------AHL20(2)         <-------TEIL --->CBF <-----------GT1 <---------ATHB12   <-----------HVH21 <---------DOF5.7(1)     --------------- ----WOX13(2)    <---------DOF5.7(1)       ----------->GT1<---------YAB5  --------->AHL12(2) --------YAB1   <---------DOF5.7(1)------>MYB83           <-------TEIL    --------->AHL25(3) --------->CBF  <----------DOF2 --------->ANAC58       --------->KAN1     <---------AHL25(1) --->WOX13(2)  <---------DAG2   --------->ANAC58   --------->YAB1         --------->AHL25(1)       -- ----->YAB1    <---------DOF5.7(1)--------->ANAC46<---------ATHB12        <---------AHL12(3)     <---   tacaatttgtgttacagccttttttcaatcactcacccaccagaaatgtcaaatcatatattcatttttttgtgaaaaaatttgcaactatgtacattca  5866900                     <------MYB46(1)                     <------MYB83                     ----------->GT1                     <---------MYB46(3)                    --------->MYB111(2)                    --------->MYB46(2)                    <---------AtMYB61                    --------->MYB55(2)                    <---------DEAR3(1)                    --------->MYB111(1)                    <---------MYB46(3)                   <---------MYB55(1)                   <--------P                  <-------GAMYB                 --------->MYB111(2)                 --------->MYB55(2)                 <---------MYB46(3)              <------MYB46(1)              <------MYB83             --------->MYB55(2)             --------->MYB111(1)             <---------MYB46(3)             <---------DEAR3(1)             --------->MYB46(2)             <---------AtMYB61                  <----------DOF2            <--------P                  --------->ZAT14            <---------MYB55(1)         <--------P          --------->ATHB12    --------->ANAC55(2)          <---------MYB46(3)  <---------ANAC55(2)                                      --------->ALFIN1 <---------YAB1 <---------AtMYB61     <---------MYB52(1)  ----------->HVH21         --------->DAG2 >AtSPL8 <---------YAB1   <---------WOX13(2)    <---------DAG2    <---------ZAT18   --------->DOF5.7(1) ------->YAB1--------->MYB111(2)   <---------ANAC46       <---------YAB1           ---------->DOF2  - ------TOE2(3)<---------MYB46(3)----------->HVH21<---------DOF5.7(1)         <---------ZAT6  --------   aggatgatagtatggttggtggttggtgaattatgtgaccggtagactcactttttagttctgactggtgcaatttgtagtcttaaaaagtgggaaggga  5867000                                                                                 --------->YAB1                                                                                 --------->YAB5                    <-----------GT1                                             --------->ICU4                 <---------AHL12(2)                                           <---------ICU4                 --------->WOX13(2)                                           -------->HAHB4             --------->ANAC46                                                 --------->YAB1      <---------AHL12(1)                                                    --------->WOX13(2)     <---------AHL25(2)                                                ----------->GT1----------->GT1     --------->AHL20(3)                                               <---------TOE2(3)     --------->AHL25(2)                                               --------->DOF5.7(1)     <---------AHL20(3)                   <------MYB46(1)             <---------TOE1(3)<------ZmHOX2a(1)     <---------AHL12(2)                   ----------->GT1           ---------->DOF2   <----------ID1     --------->AHL12(2)                   <------MYB83           <---------ZAT6 <---------YAB1    <---------AHL12(1)                  <---------WOX13(1)  <---------KAN1  --------->AHL12(2)    --------->AHL12(1)                 <---------RVE1(2)    --------->CCA1(2)<---------ATHB51 --------->YAB1  <---------WOX13(2)   --------->ATHB12     <---------RVE1(2)<---------AHL12(2) ---------->GT1  --------->AHL12(2)  <---------YAB1        --------->ARR11(3)--------->ICU4 <-------- --->GT1<-----------GT1            <----------DOF2        <------ZmHOX2a(1) <---------WOX13(2)     --   aaatgaaaattttccacataatttacttcaattttgtctttgattggtgataacaaaataggatatagagtaaaggttaattatgatgaggaaaaaaaca  5867100                                                                                                 <---                                                                      <---------ANAC58          -----                                                                      <---------ANAC46         ------                                            --------->AHL20(2)        <---------ANAC58         <-----                                          <---------WOX13(2)      <---------MYB52(1)           <-----                                          --------->WOX13(2)    --------->ATHB12           <-------GAMYB                                      --------->At5g28300    --------->GATA12             ----------- --ID1   <---------YAB1              ----------->GT1         --------->RVE1(2)            <---------MYB46(3) ------->RVE1(2)                    --------->ZAT6    <---------DOF5.7(1)              --------->ALFIN1   aactccaacttatactagcagtcaaaagtatatttcttacagtaaattacatagactctttcaaatccattggcttgttagactagtatgtgtggttatt  5867200  Previous    Next  AGI:  At5g17770.1    Description:  ATCBR (NADH:CYTOCHROME B5 REDUCTASE 1). similar to NADH-cytochrome b5 reductase, putative [Arabidopsis thaliana] (TAIR:AT5G20080.1); similar to NADH:cytochrome b5 reductase [Vernicia fordii] (GB:AAV69019.1); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; (InterPro:IPR001709); contains InterPro domain Oxidoreductase FAD/NAD(P)-binding; (InterPro:IPR001433); contains InterPro domain Oxidoreductase FAD-binding region; (InterPro:IPR008333); contains InterPro domain NADH:cytochrome b5 reductase (CBR); (InterPro:IPR001834) Range:  from: 5864253    to: 5866711    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.