Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <------MYB83                                       --------->MYB59                                  <---------MYB52(1)                           ------>NtERF2<------MYB46(1)                           <---------At4g35610             <---------ANAC58    <-------GAMYB             <---------ANAC46 --------->At4g35610  <------NtERF2            --------->At4g35610 --------->HSFB2a(2)      --------->DEAR3(1)      <---------YAB1            <---------------AGL15 <---------HSFB2a(2)      <---------DEAR3(1)   ------->TEIL                 --------------->AGL15 -------->ETT(1)       --------->ANAC46--------->MYB46(2)                  ----------------->AG ------->ALFIN1<---------ANAC46 <-----------RAV1(1)                        ----------------->AGL3 ---------HVH21----------->GT1<---------At4g35610--------->AHL20(2)---------->ID1                  <- ->DOF2      <---------ANAC58 <---------ZAT2<---------YAB1   <---------GLK1(2)   ---------->DOF2   --   ggtcgggaattggagtcgtgtgaaaacgccgctgctgttgtttggtatgaatattatacaatagaatttgttgtcttaccaaaaaaagtctatgaagaca  5454500                      <XXXXXXXXXXXXXXXXXXXXMIR426                     <---------TOE1(3)                     <---------TOE2(3)               <---------YAB1            <---------YAB1          --------->YAB1          -------->ATHB1          <---------ICU4         <---------AHL20(2)                                              --------->TOE1(3)       <---         --------->AHL20(2)                                   <---------ANAC58  <---------AHL20(2)         <---------ATHB51                                     <---------AtLEC2 --------->AHL20(2)<---         --------->ICU4----------->GT1                        <---------ANAC46 <---------AHL20(1)<--- --------ZAT14<---------AHL20(1)                              <---------ANAC58 <---------AHL20(2)---- ------->ZAT14<---------AHL20(2)                     --------->YAB1      --------->TOE2(3) <---------TOE2(3)   ctgaagagcaaattattatttttaagggaaaatttccaaaataaacttcatgtattcaaaatttgcttgaaaaaacctcaattttttttgtttgagattg  5454600                                                                                               <-----                                 --------->AHL20(2)                                            ------      --------->ARR14(2)         <---------AHL20(2)                            <---------AHL20(2)   --------->AHL20(2)           --------->AHL20(2)              --------->AHL20(2)             <----- ------ANAC58   --------->AHL20(1)                              <---------AHL20(2)             ------ ------ANAC46   <---------ARR11(3)                     --------->ANAC58       <---------AHL20(2) ------ANAC58   <---------AHL20(1)   --------->AHL20(2)--------->ANAC46       --------->AHL20(2)   <- ------->GT1    --------->ARR11(3)   <---------AHL20(2)--------->ANAC58   <---------YAB1    <--------   tgtgaataaatctgccaatattttgttttagcaatttaaaaaattgaagtttttttctcgcaaattttaaatagttgtgatttattttggaattttacct  5454700                         --------->O2                         >>>>>>>>>>HY5                         --------->TGA1a                         --------->bZIP60(1)                         <---------ANAC55(1)                         <---------bZIP60(2)                         <---------ANAC58                         <---------TGA1a                         <---------bZIP60(1)                         ==============================bZIP_DOF                         <---------O2                         <---------ANAC58                         <---------ANAC55(2)                         --------->ANAC55(2)                         <---------ANAC46          <---------------AGL15   <-----------GT1      ----------->STF1  --------->AHL20(2)  ----------->HVH21 ----MYB59--------------->AGL15                                <---------ALFIN1 --->TOE2(3)---------->DOF2--------->ALFIN1                   <------NtERF2 ----DAG2----------------->AGL2                       --------->ALFIN1          <---------ATHB12 --->TOE1(3)=======================bZIP_DOF     <---------TOE2(3)    ---------->DOF2 --------YAB1         ----------->TGA1      <----------DOF2 --------->PCF5      ----------->HVH21 ---GT1  ----------------->AG<------NtERF2----------->GT1   --------->PCF2  <---------ATHB12   <-----   tatttttaatatccaaaaggagaagtgacgtggcgatatcgaagcggtttaatgaagtgatggccccatcttaaagaaatcaatgacccttatcgttcca  5454800                                                   <-------GAMYB                                                  <---------MYB46(3)                                                  --------->MYB52(2)                                                  --------->MYB55(2)                                                <-------GAMYB                                               <---------MYB46(3)                                               <---------DEAR3(2)     ----------->GT1                                              <---------DREB2C(2)     <------NtERF2                                              <---------DEAR3(1)      <---------ANAC46                                          ------->TEIL                <---------ANAC58                                          <-------TEIL                <---------ANAC58                                         <---------SPL1(1)           ------>NtERF2                                        <---------SPL1(2)           <---------ANAC46            <----                                        --------->LBD16             <---------ANAC58    <-----------HVH21                                        <---------SPL7              <---------ANAC58    --------->LBD16                                       <---------ANAC46        <------------CBF        <---------ANAC46                                       <---------ANAC58 <---------ANAC46              <------NtERF2                                       <---------ANAC55(2)<------NtERF2               --------->ATERF1(1)                       <-----------RAV1(1)--------->SPL7<---------LBD16    <---------GLK1(1) -------- ----ALFIN1 <------NtERF2              <---------ANAC58 --------->ETT(1)   --------->GLK1(1) <-------   cttctatcggagtcggagtttttttttgttgttgttgtattccgtacgtcggtcgttgtcgggagaattggcgcgtgaaatccttggctccgtcgaatac  5454900                                    <---------TOE1(2)                                   <---------ANAC46                                 <---------ANAC46             <---------MYB46(3)  <---------TGA1a            <---------DEAR3(1)   <---------ANAC58          ------>NtERF2          <---------O2         <---------DEAR3(1)<---------WOX13(1)       ------>NtERF2     --------->ATHB12       <---------ATERF1(1)<------------CBF      *TSS                        <----------DOF2      ----------->HVH21 --------->ICU4       <---------YAB1              <---------MYB52(1)      --------->DEAR3(1)<---------YAB1 <--------P                      <---------ANAC58    ------>NtERF2      <---------TOE2(2)    <---------ARR14(2)         <---------ANAC58 ----------->HVH21 -----ANAC55(2)        <---------TOE1(2)    --------->ARR14(2)        --------------->AtSPL8 ->ARR14(2)<---------At4g35610   ===============MYC_MYB             <-----------GT1   --------->At4g35610 --ARR14(2)--------->At4g35610   <---------ANAC58                  <---------GLK1(1)  ----------->RAV1(2)   gtctgcctccgacggctgtgagtcgcatgattgagtcgtgggtaagtatccttgtgacttcaaatttgtatttccgttctttataatcccctgactcttg  5455000                             <------MYB83                             <------MYB46(1)                          <---------ANAC58                              ----------->HVH21                          <---------AtLEC2                           --------->ATHB12                    ------>MYB83                                    <---------YAB1                    ------>MYB46(1)                                 --------->ICU4                 --               <-----------GT1     --------->ATHB12            --------->YAB1                     ---         ----------->GT1  <---------ANAC46                 <---------AHL20(2)                     <--        <------ZmHOX2a(1) <---------ANAC58                --------->AHL20(2)           --------->GLK1(2)   agaaaatcgaggagaaaaaaccatccttgcttggtattcatttgaagagtgttttagttataaaatcgtaatgtttgacggtatgtgatattctgtgagc  5455100                                                                 --------->TOE2(3)                                                      --------->ANAC55(2)                                                      <---------ANAC55(2)                                                     --------->MYB59         ---------->DOF2                             <---------TOE1(2) <---------YAB1           ----------->GT1            <---------TOE2(3) ------->ATHB12      <----------DOF2                 <---------TOE2(2) <---------ARR11(3)         <-- ------>ICU4       ---------->ID1        <----------DOF2      <-----------GT1                    ---- -------YAB1  <----------DOF2  --------->ICU4    <---------ZAT6  --------->TOE1(3)               <---   atgattattcagaaagcttttgtctttttagtaaatattgtctctttcttagtcttaggtaatgtaacctcaagaactctatgcgagaacattacacatt  5455200                                  --------->YAB1                                 <---------YAB1                                 <---------ATHB12                                 --------->ICU4                         <---------TOE2(3)                         <---------TOE1(3)---------->DOF2             <---------MYB52(1)                        ---------->DOF2 <---------YAB1        <---------YAB1                  <------                    ----------->GT1   --------->YAB1        <---------ICU4               <---------MYB52(1) -------YAB1    <---------AHL20(2)-------->ATHB1            --------->YAB1              <-------GAMYB ----->ARR11(3) --------->AHL20(1)--------->ATHB12         <---------YAB1            <---------At5g28300 ------ARR11(3) <---------AHL20(1)<---------ICU4           --------->ICU4          <---------SPL7   atctttggaattggatattatattgttaaagtttaatcattgatgaaagttgcaaagagttatgatgactccgttttgggattgtcttaccgttgtcttt  5455300                                                                                              -------                                                                                              >>>>>>>ZML2                                                                                              <------                                                                                              <------                                                                   XXXXXXXXXXXXXXXXXXXXX>MIR771     =                                                                 --------->ANAC46             -------                                                                 --------->ANAC58          --------->ARR11(3)            <---------TOE1(3)                  --------->ICU4    --------->ANAC58      ==============            <---------TOE2(2)           ---------->DOF2  <---------ANAC58          <---------WRKY38(1)            <---------TOE1(2)   <---------HSFB2a(2)      <---------ANAC58     --------->At4g35610   - ----DOF2   <---------TOE2(3)   --------->HSFB2a(2) ----------------------->TaNAC69(2) ---------->DOF2   ctggttttaatgcttaggtttctcttgatgaagtctagaagtgaaagtaagaattgtaggcttgcacaagcctctagagtagcagtcaacaaagttctag  5455400  Previous    Next  AGI:  At5g16620.1    Description:  PDE120 (PIGMENT DEFECTIVE EMBRYO). similar to unnamed protein product [Vitis vinifera] (GB:CAO16424.1); contains InterPro domain Heat shock chaperonin-binding (InterPro:IPR006636) Range:  from: 5450699    to: 5454538    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g16630.1    Description:  DNA repair protein Rad4 family. similar to Os08g0427500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061843.1); similar to DNA repair protein Rad4 [Medicago truncatula] (GB:ABN08087.1); contains InterPro domain DNA repair protein Rad4; (InterPro:IPR004583) Range:  from: 5454948    to: 5459581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.