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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(1)
--------->
TOE2(2)
---------
DOF2
--------->
TOE1(2)
------
YAB1
----------------->
AGL1
-----
ARR11(3)
<---------
AHL20(2)
--------->
YAB1
---->
ARR11(3)
--------->
AHL20(2)
<---------
TOE2(3)
<---------
ICU4
---------
-----
AHL20(1)
--------->
TOE2(3)
<---------
TOE1(3)
<--------
HAHB4
--------->
ANAC58
--->
RVE1(1)
----------->
GT1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
ANAC58
--->
CCA1(1)
--------->
At5g28300
--------->
AHL20(2)
<---------
YAB1
----------->
GT1
->
YAB1
----------->
GT1
--------->
ANAC55(2)
<---------
MYB52(1)
=====================
-
YAB1
--------->
At4g35610
<---------
ANAC55(2)
<-------
GAMYB
<-----------------
AGL1
tctttgaatcacatatgtaagcagtaattcgttaaaatatgtattaatttgaggtttttctccgttaatctataattacctaggaaggaaacaagcataa
4743000
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<--------
ATHB1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
------->
GAMYB
<---------
AHL20(2)
--------->
ATHB51
--------->
MYB46(3)
<---------
YAB1
<---------
ATHB51
--------->
MYB52(1)
--------->
ICU4
--------->
ICU4
--------->
ANAC58
---
<------
ZmHOX2a(2)
<---------
ATHB12
--------->
ANAC58
<--
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ICU4
<---------
ATHB12
---
--------->
YAB1
--------->
GLK1(2)
----------->
GT1
--------->
WOX13(1)
------->
GAMYB
>
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
--------->
TOE1(3)
<---------
ANAC46
--------->
MYB52(1)
===============
HOX2a_HOX2a
<-----------
ARR10
--------->
TOE2(3)
----------->
RAV1(2)
--------->
GLK1(2)
actgaatcaagatcaagattaatttcccaaaaatcttgccaataatttaaaacgttagagatgaaaattac
ctggacaatcaacgacgattctaacggag
4743100
<------
NtERF2
------>
NtERF2
<-----------
HVH21
<-----------
TGA1
--------->
TGA1a
<------
--------->
RAP2.3(1)
------>
NtERF2
--------
--------->
LBD16
<------
ZmHOX2a(2)
<---------
RAP2.6(2)
<---------
LBD16
---------
------>
MYB46(1)
<--------
------>
MYB83
======================
--------->
ANAC58
--------->
GLK1(2)
--------->
YAB1
--------->
AtLEC2
--------->
ANAC58
--------->
ZAT6
<---------
LBD16
<--------
------>
ARR14(2)
--------->
ANAC58
----------->
RAV1(1)
<---------
ARR14(2)
---------
-------
ARR14(2)
--------->
ANAC58
--------->
AtMYB61
--------->
WOX13(1)
--------->
GLK1(2)
------>
GLK1(2)
<-----------
GT1
<---------
TOE2(3)
--------->
ANAC46
--------->
ARR14(2)
---------
tatccatgaacaagaagacgtttaacaatggcacgaccaaggtaagaaacaccaccagtaacacaaaccaatctgtttccggcgtcagaatcaagatcca
4743200
=====================================
bZIP_DOF
===================================================
MYC_MYB
--------->
ANAC58
=====================================
bZIP_DOF
--------->
ANAC58
<---------
O2
--------->
TGA1a
<---------
TGA1a
--------->
O2
------>
NtERF2
------>
NtERF2
<-------
MYC3
--------->
ABI4(1)
------>
NtERF2
--------->
RAP2.6(2)
<---------
ZAT18
--------->
DREB2C(2)
<---------
ANAC46
--------->
DEAR4(1)
--------->
DEAR3(1)
--------->
DEAR3(1)
<------
NtERF2
<----------
DOF2
===============
MYC_MYB
--------->
ATERF1(1)
--------->
ANAC58
--------->
RAP2.3(1)
------->
GAMYB
<---------
ATERF1(1)
--------->
ANAC46
<---------
RAP2.3(1)
--------->
ANAC58
<---------
ORA47(2)
--------->
MYB46(3)
<---------
DEAR4(2)
------
-
TEIL
--------->
HSFB2a(2)
<---------
RRTF1(3)
------
->
CCA1(2)
<---------
ALFIN1
<---------
RAP2.3(2)
-------
>
AGP1
<---------
HSFB2a(2)
<----------
DOF2
<---------
DEAR3(1)
---------
-
ARR14(2)
--------->
AtMYB61
<------
NtERF2
--------->
At4g35610
------>
NtERF2
=========================
MYC_MYB
<---------
DEAR3(1)
<---------
At4g35610
--------->
DEAR3(1)
-
ARR11(3)
--------->
MYB46(3)
--------->
ARR14(2)
---------->
CDC5
------->
TEIL
<---------
LBD16
>
ARR11(3)
<---------
At5g28300
<---------
ARR14(2)
<----------
DOF2
------->
MYC3
--------->
At4g35610
>
ARR14(2)
<-----------
GT1
--------->
At4g35610
------>
ZmHOX2a(1)
<---------
ALFIN1
<---------
At4g35610
tggcatttctagatttaccaccgccacgagagcctctgaatccgtcgtcgtctttcctcctttgcacagcggcgcacatgaactctttaagctccgccga
4743300
--------->
YAB1
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
----
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
ZAT18
>
NtERF2
<---------
SPL7
<---------
YAB1
<---------
ZAT14
--->
HSFB2a(2)
<-------
TEIL
<-----------
GT1
<-------
-->
DEAR3(1)
<---------
TOE1(2)
<------
NtERF2
---------->
DOF2
<------
ZmHOX2a(2)
--------->
ZAT14
>
LBD16
<-----------
HVH21
--------->
YAB1
---------->
DOF2
==================================
gaacgtctccgtcgcacgtacaatcctcat
aatagtcggagtaaagaatcaacaaaggaacgagttgagatcgaattatacaattctttgttcactgtcc
4743400
<---------
CCA1(1)
<---------
MYB52(1)
<---------
RVE1(1)
<-------
GAMYB
<------
ZmHOX2a(1)
<---------
ANAC46
<---------
TOE2(3)
---------->
DOF2
<---------
ANAC58
<------------
CBF
--------->
ARR11(3)
<
<---------
ANAC58
<-------
TEIL
--------->
ICU4
<-----------
TBP
<
-->
ZmHOX2a(1)
--------->
CCA1(2)
--------->
CCA1(2)
<---------
AHL20(2)
<-
----
HVH21
----------->
GT1
<------
ZmHOX2a(1)
<---------
ARR14(2)
--
===
HOX2a_HOX2a
<-------
TEIL
---------->
DOF2
*
TSS
----------->
GT1
<---------
ARR11(3)
-----
tctggtttcgttggctctataggttcagagaaggtagaaagagatacac
agaggattgagaaatgaggaagaagatatttatagagagaaagaaacagag
4743500
--------->
ANAC58
--------->
ANAC46
--------->
ZAT2
<-----------
HVH21
<---------
At4g35610
--------->
bZIP60(2)
--------->
At4g35610
--------->
ANAC46
<---------
ZAT2
<---------
MYB52(1)
<-----------
RAV1(2)
-------
GAMYB
--------->
ANAC58
--------->
At4g35610
---------
RAP2.6(3)
<----------
DOF2
--------
MYB46(3)
----------->
GT1
<---------
DAG2
--------->
GT1
<---------
GLK1(2)
--------->
AHL20(2)
--------->
At4g35610
<---
------->
MYB.PH3(1)
---------->
DOF2
<---------
AHL20(2)
<----------
ID1
<---------
At4g35610
<---
gccgttacacatcacacgagaatgctaaagagtctctcatttttttgaagaaaaaaataagacaagtgtaatacaattcagctttatcggctcagcttgg
4743600
--------->
ANAC55(2)
<---------
YAB1
<---------
ANAC55(2)
<---------
AHL20(2)
<-------
TEIL
<---------
YAB1
<---------
AHL20(2)
<----------
DOF2
<---------
AHL20(2)
<---------------
AGL15
<----------
DOF2
<------
ZmHOX2a(2)
--------->
ICU4
--------->
YAB1
----------->
GT1
-----
------
ANAC58
--------->
ARR14(2)
--------->
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
<----
------
ANAC58
<---------
ARR14(2)
<---------
ANAC46
<-----------
GT1
--------------->
AGL15
<---------
AHL20(2)
cttcctttctttatacgaatacgatcccatctacggtgtatatttattattttacctataaaaaagactataaatagttaaatacgtttttatttgttcc
4743700
<------
ZmHOX2a(2)
--------->
ARR11(3)
<-----------
HVH21
<----------
DOF2
<---------
ARR11(3)
--------->
ARR11(3)
--------->
GLK1(1)
<---------
GLK1(1)
------->
TEIL
<---------
YAB1
<---------
CCA1(2)
--------->
YAB1
--------->
ICU4
<---------
YAB1
---->
HSFB2a(2)
<---------
At4g35610
--------->
AHL20(2)
<---------
YAB1
-----
HSFB2a(2)
--------->
At4g35610
----------->
GT1
<---------
ARR11(3)
<-
aaaaacctgatatctttcagatcacctatggtaatgtatatgaagtgactaagtaaatatcaaagtttatcaagaactaaattatgttattagtctctta
4743800
---------->
DOF2
<-----------
RAV1(1)
--------->
AHL20(2)
<---------
YAB1
--------->
ANAC55(2)
--------->
ATHB51
--------->
ANAC58
<---------
YAB1
----------->
GT1
<---------
AHL20(2)
--------->
ANAC58
<--------
<---------
YAB1
<---------
GLK1(2)
<---------
ANAC55(2)
<<<<<<<<<
TBF1
--------
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
----------->
GT1
<-----------
GT1
<--
atttttattattgttggagtatgtaaatgtaatagaatttgtttaaaaaaatcaagtaattacaaagttatacagggttttttcttcttcttatattatg
4743900
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AGI:
At5g14700.1
Description:
cinnamoyl-CoA reductase-related. similar to cinnamoyl-CoA reductase-related [Arabidopsis thaliana] (TAIR:AT4G30470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14759.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:
from: 4740255
to: 4743449
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.