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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                       <---------TOE2(3)
        <---------ARR11(3)                                             ----------->GT1
        --------->ARR11(3)                                     <-------TEIL
       --------->GLK1(1)                                   <---------YAB1
       <---------CCA1(2)                                  --------->AHL20(2)         ----------->GT1
-------->YAB1                          <---------ZAT6     <---------AHL20(2)       ---------->DOF2 <
  
aataagactgatatctactaaatgtgatttgctatactagtagagctagtagtagcaagattaaaattcatattaagaaaaaatggaaaagaaaaacatg  4218500
                                                        >>>>>>>>>>>>>>>>>LFY
                                                        --------->ANAC58
                                                  --------->At4g35610
                                                  <---------At4g35610
                                              <-----------HVH21
                                          <---------AHL20(2)
<---------HSFC1(1)                       --------->AHL20(2)
--------->HSFC1(1)                       <---------AHL20(1)               --------->MYB52(1)------>MYB46(1)
<---------HSFB2a(2)                      --------->AHL20(1)           --------->ZAT6      <---------MYB59
--------->HSFB2a(2)                      <---------AHL20(2)    ----------->HVH21       <-----------GT1
---------ANAC46 <------ZmHOX2a(2)       --------->YAB1  --------->ANAC58--------->At5g28300 ------>MYB83
  
tttcgagaaaaatatacagatcagagactagagtagaaaacaaatataatgtcagaagaacccaatgtgacgaacagtaacagaaacatgttaccaaatt  4218600
                                                               --------->ARR11(3)
                                                               <---------ARR11(3)
                   <---------ICU4                             --------->RVE1(1)
           <---------YAB1                             --------->ARR14(2)
          --------->AHL20(2)                          <---------ARR14(2)
          <---------AHL20(2)                        --------->LBD16
        <---------AHL20(2)                         <---------ANAC46
     <---------ARR11(3)                            --------->HSFB2a(2)                  --------->AHL20(2)
     --------->AHL20(1)                            <---------HSFB2a(2)     <---------ANAC58
     --------->ARR11(3)               <---------GLK1(1)--------->CCA1(2)   <---------ANAC58
     <---------AHL20(1)        --------->ATHB12   <---------LBD16    <----------DOF2 --------->WOX13(1)
    --------->CCA1(2)         <---------YAB1    <-----------GT1--------->ARR14(2) --------->ANAC46
   <---------ARR11(3)         <-------TEIL  <---------MYB52(1)--------->CCA1(1)   --------->ANAC58
   --------->ARR11(3)       --------->YAB1 <-------GAMYB  --------->AHL20(2)      --------->ANAC58 -
  
tttgaagatatatttttataaaacattacaatgttcattggacttccgttatttccggatataaaatatcttctttctgcgtagcaagcaattacattac  4218700
                                         --------->AHL20(2)
                                         --------->AHL20(1)
                                         <---------AHL20(2)
                                        <---------AHL20(2)
                                        --------->AHL20(2)
                                     <---------AHL20(2)
                                     --------->AHL20(1)
                                     --------->AHL20(2)
                                     <---------AHL20(1)
                                 -------->ATHB1
                                 <--------HAHB4                     <---------ANAC58
         <---------TOE2(3)       <---------ICU4                     <---------ANAC58               -
<------MYB46(1)                 <---------ATHB12                 --------->ALFIN1                 --
----------->GT1       ------->MYC3  --------->AHL20(2)           <--------P                   <-----
<------MYB83   --------->AHL20(2)--------->YAB1    --------->ANAC58<------MYB83              -------
<---------ANAC55(2)   <-------MYC3--------->TOE2(3)<---------ANAC55(2)        --------->YAB1--------
-------->MYB59 <---------AHL20(2)--------->ATHB12  --------->ANAC58<------MYB46(1)         ---------
  
attaggtatattaagaatttaaacatgtgttttgaatcattaaattaattagataagtaagagaagaggttgggagcctaataaaaacaaaacaaaaagg  4218800
         <---------ANAC58                             <-------GAMYB
     --------->ARR14(2)                               ----------->GT1
     <---------ARR14(2)                              <---------ANAC58
-------->DAG2   <------------CBF                     <---------ANAC58                            ===
-------->DOF2------------>CBF                        ----------->GT1                             ---
-----ID1 <---------ANAC58           ---------->DOF2 <---------TOE1(2)                            <--
---->GT1<------MYB46(1)       ---------->DOF2     ------->PIF5                                   <--
->DAG2  <------MYB83      ---------->DOF2         <-------PIF5--------->ANAC55(2)         *TSS   ---
->DOF2 <---------AtMYB61<---------RAP2.6(3)  ------->TEIL     <---------ANAC55(2)   --------->AHL20(2)
  
aaaaagtggataggttgccaattgtgccgaaaagaaagagaaagcatgaacctcgtgcgttaaataagtatcagagacatactacattttaaaaactctc  4218900
                    <---------ICU4
                   <---------YAB1
                   --------->ICU4
           --------->GLK1(2)
           ------------>MYB.PH3(1)
           --------->ARR14(2)                      --------->ARR11(3)
       --------->YAB1                              --------->ARR14(2)
    --------->GLK1(1)                              <---------ARR14(2)                              <
    <---------GLK1(1)     ------>ZmHOX2a(1)        <---------ARR11(1)                       --------
========================MYC_MYB       --------->At4g35610        <---------ARR11(3)       <------ZmHOX2a(2)
------>O2  <---------ARR14(2)   <---------AHL20(2) <---------ARR11(3)                    --------->ARR11(3)
-------O2 <---------GLK1(2) XXXXXXXXXXXXXXXXXXXX>MIR774B*    <---------ANAC58     --------------->AGL15
-------TGA1a    <---------MYB52(1)    <---------At4g35610    <---------ANAC58 <----------DOF2      -
------>TGA1a  ----------->GT1  --------->AHL20(2) <---------CCA1(2)------>ZmHOX2a(2)     <---------ARR11(3)
  
acatgagaaatcagaatccgttattattcctccatttattcatctcaaaacccatatctctctgtcttgatctctctctcactttctaataagatcaaag  4219000
                                                                                            ------>ZmHOX2a(2)
                                                                                       <---------HSFB2a(2)
                                                                                       --------->HSFB2a(2)
             --------->TOE2(3)                                                    --------->HSFC1(2)
           -------->P                                                             <---------HSFC1(2)
        <---------At4g35610                                     ------>ZmHOX2a(1) --------->HSFB2a(1)
        --------->At4g35610                                     ===================================HOX2a_HOX2a
       --------->ANAC58                                    ------->GAMYB          <---------HSFB2a(1)
     ---------->DOF2           --------->TOE1(1)       --------->MYB46(3)     --------->LBD16
   --------->ETT(2)            --------->TOE2(1)      ------>MYB83           <---------HSFB2a(2) <--
---------ARR11(3)             <---------LBD16         ------>MYB46(1)        --------->HSFB2a(2)----
-->DOF2--------->ANAC58       ------>ZmHOX2a(1)    --------->MYB46(3)        --------->HSFC1(1) <---
-------->ARR11(3)        <---------GLK1(1)     <---------MYB52(2)            <---------HSFC1(1)-----
  
aagatgtcgaaagctaccatagaactcgatttcctcggacttgagaagaaacaaaccaacaacgctcctaagcctaagttccagaaatttctcgatcgcc  4219100
                   <------MYB46(1)
                   <------MYB83                                                          <---------RVE1(1)
         <---------TOE1(2)                                                               --------->GLK1(1)
        --------->LBD16                                                          ----------->RAV1(2)
       <---------TOE1(1)                                                      --------->GLK1(1)
  --------->HSFC1(2)                                              <---------AHL20(2)    --------->ARR14(2)
 <---------TOE1(2)<---------AtMYB61                              <---------AHL20(1)     <---------ARR11(3)
----NtERF2      <---------MYB52(1)                               --------->AHL20(2)     --------->ARR11(3)
-->NtERF2<---------TOE2(2)                      <---------ANAC58 <---------AHL20(2)     <---------ARR14(2)
--------HVH21 --------->MYB52(2)      <----------DOF2   ---------->DOF2       <---------GLK1(1)    <
---->DEAR3(1)<-------TEIL   ---------->ID1      <---------ANAC58 --------->AHL20(1)------>ZmHOX2a(1)
  
gtcgtagtttccgaggttcgtttggtttttagtcgctctctcttttttttttcttgcgataaatcgaatttattcatatggaactcctgcagatattcaa  4219200
                                                                                          <---------ANAC46
                                                                                          <---------ANAC58
                                                                                          <---------ANAC58
                                                                                       --------->ARR14(2)
                                                                                     <------MYB46(1)
                                                                                     <------MYB83
                   --------->LBD16                                                   <---------DEAR3(2)
                 <---------LBD16                                                    --------->MYB52(2)
                 ------>ZmHOX2a(2)          <<<<<<<<<<<<<<<<<LFY       --------->At4g35610<---------ANAC55(1)
                <------ZmHOX2a(2)        --------->At4g35610        <---------At4g35610<---------ARR14(2)
               <---------ARR14(2)        <---------At4g35610     <-------TEIL     <---------MYB52(1)
-------TEIL    --------->ARR14(2)     <---------MYB52(1)     <---------YAB1      <---------SPL7
  
ggtgcgatttcgaaaatcgatccggagattatcaaatcgctgttagcttccactggaaacaattccgattcatcggctaaatctcgttcggttccgtcta  4219300
                                    <---------WRKY38(1)
                     ------>ZmHOX2a(2)
                    <------ZmHOX2a(2)   <-------MYC3
                   --------->ARR14(2)   ------->MYC3
                   --------->AGP1   <---------WRKY12
                   --------->ARR11(3)  --------->O2<-----------RAV1(2)
                   <---------ARR14(2)  --------->ANAC58
                  --------->At4g35610  --------->ANAC58                   --------->DAG2
         <------ZmHOX2a(2)       --------->LBD16--------->ANAC58      --------->LBD16
        --------->ARR11(3)     <---------LBD16  --------->ANAC58     --------->HSFB2a(2)
        <---------ARR11(3)   <-----------GT1    --------->ANAC46     <---------HSFB2a(2)
        <---------ARR14(2)  ----------------------->TaNAC69(2)      <---------LBD16             <---
        --------->ARR14(2)--------->GLK1(1)<---------CCA1(2)     <----------DOF2                <---
      ----------->ARR10--------->LBD16 --------->ANAC46        ---------->ID1        <-----------GT1
--------->LBD16   <---------At4g35610<---------ALFIN1  <---------RVE1(1) ---------->DOF2<----------DOF2
  
ctccgagggaagatcagcctcagatcccgatttctccggtccacgcgtctctcgccaggtatttttgtctttccggtaaagttttttttttctttctaac  4219400
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AGI:  At5g13220.1   
Description:  JAS1/JAZ10/TIFY9 (JASMONATE-ZIM-DOMAIN PROTEIN 10). Identical to Protein TIFY 9 (TIFY9) [Arabidopsis Thaliana] (GB:Q93ZM9;GB:Q3E9I1;GB:Q3E9I2;GB:Q9LYV4); similar to JAZ12/TIFY3B (JASMONATE-ZIM-DOMAIN PROTEIN 12) [Arabidopsis thaliana] (TAIR:AT5G20900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60098.1); contains InterPro domain ZIM (InterPro:IPR010399)
Range:  from: 4218891    to: 4220817    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.