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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
------>
NtERF2
<---------
ANAC58
--------->
SPL7
<---------
ICU4
--------->
MYB46(3)
<---------
SPL7
<---------
RAP2.6(3)
<---------
GLK1(2)
<---------
ANAC58
<---------------------
WRI1
--------->
ICU4
<---------
ANAC58
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
TOE1(3)
---------
ANAC58
<---------
TOE1(3)
------>
NtERF2
--------->
TOE2(3)
<-----------
GT1
---------
ANAC58
<---------
TOE2(3)
<------
ZmHOX2a(2)
<----------
DOF2
<---------
YAB1
-
ANAC46
<----------
DOF2
======================
HOX2a_HOX2a
<----------
DOF2
---------->
DOF2
------
ttacttggtgctttcaacgacttaaggattgagccatacgatcgatgccgtctcattctctttaatacaaactttaaagattagattattacaacttgaa
3839000
----------------->
AGL3
------>
MYB83
------>
MYB46(1)
--------->
ANAC55(2)
------>
ZmHOX2a(1)
<---------
ARR14(2)
---------->
DOF2
--------->
YAB1
--------->
TOE2(3)
--------->
ARR14(2)
---------->
DOF2
<---------
YAB1
<----------
DOF2
--------->
AtMYB61
--------->
YAB1
<---------
ANAC55(2)
<---------
ALFIN1
---->
DOF2
---------->
DOF2
--------->
WOX13(1)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
agggtcttttcctcaaacaaagaccatccatatacaggtctatcatatactaaagaaaggataagtattttcataaacaatgactaaggaccacattgac
3839100
<---------
YAB1
--------->
YAB1
<---------
YAB1
<---------
ALFIN1
--------->
ICU4
--------->
ANAC46
<---------
ATHB12
--------->
ZAT6
--------->
LBD16
<-----------
GT1
--------->
ANAC55(2)
<---------
ANAC46
--------->
AHL20(2)
--------->
ANAC46
-------->
P
<---------
AHL20(2)
<---------
LBD16
<---------
MYB59
<---------
YAB1
<---------
ARR14(2)
<---------
ARR11(3)
--------->
AHL20(2)
--------->
ARR14(2)
---------->
DOF2
<
--------->
AHL20(1)
--------->
HSFC1(2)
<---------
KAN4(1)
<-
<---------
AHL20(1)
<---------
HSFC1(2)
----------->
GT1
--------->
ARR11(3)
<----
taaaatataattaacaccacttgatgaagtttccgcaatgataatagaactcacatttagtgaataatccaaagaccttacctgtaatgtattagactat
3839200
--------->
YAB1
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
<---------
ICU4
--------->
ICU4
<---------
ICU4
<--------
ATHB1
-------->
HAHB4
--------->
YAB1
--------->
ATHB51
<--------
HAHB4
--------->
ICU4
--------->
AHL20(2)
--------->
TOE2(3)
--------->
YAB1
--------->
TOE1(3)
--------->
AHL20(2)
<---------
ZAT14
<---------
YAB1
---------
<---------
ATERF1(1)
<---------
ATHB51
<------
MYB46(1)
-----
---------->
DOF2
---------->
DOF2
<---------
YAB1
--------->
MYB46(3)
---------
---------
ZAT6
------>
NtERF2
--------->
YAB1
<-----------
GT1
---------
--------
YAB1
--------->
ETT(2)
<---------
AHL20(2)
<---------
At4g35610
<------
MYB83
<----
-----
YAB1
<---------
ETT(2)
--------->
AHL20(2)
<---------
ZAT6
<---------
YAB1
--------->
LBD16
tagtattaacaaagactggcgactgcaaagcttaattaataattataataaaaattcagtagagctaattaacaactatcagtgggtttcttccacgata
3839300
------
<-------
<---------
ICU4
<--------
HAHB4
--------->
At4g35610
--------
>
ANAC46
<---------
At4g35610
<---------
At4g35610
*
TSS
---->
HSFC1(2)
--------->
At4g35610
------->
TEIL
--------->
ATHB12
>
ANAC58
<-----------
HVH21
<---------
TOE2(1)
<---------
YAB1
>
ANAC58
------------>
CBF
<---------------
AtSPL8
--------->
ICU4
-----
HSFC1(2)
--------->
GLK1(2)
------------>
CBF
<---------
TOE1(1)
--------->
YAB1
cttcgagcttaagacaaaataagaagaatttgtcaatgtcaactccaatggcagtataagtacgatgaatttttctgatgactctataatc
atttgatct
3839400
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ARR14(3)
<---------
AGP1
<-------
TEIL
<---------
ARR14(3)
----------->
RAV1(1)
<---------
ANAC46
--------->
ARR14(2)
--------->
ANAC58
<---------
ANAC58
<---------
ARR11(3)
--------->
ANAC46
--------->
ANAC55(2)
<---------
ARR14(2)
---------->
DOF2
--------->
ANAC46
<---------
ICU4
<---------
ANAC46
>
ZmHOX2a(2)
--------->
AHL20(2)
--------->
ANAC46
<---------
MYB46(3)
--
ARR11(3)
---------->
DOF2
<---------
ALFIN1
<---------
ANAC55(2)
<---------
ATHB12
->
ARR11(3)
--------->
YAB1
--------->
ANAC58
<---------
ANAC58
<------
ZmHOX2a(2)
tggcaagatctcgagagcatttataaagaaattaaagcaacacatacacacatcaatttcgtaatcgttgcagagtaagaccgatcatcg
atggctgatg
3839500
--------->
At4g35610
--------->
MYB46(3)
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<---------
HSFC1(2)
--------->
HSFC1(2)
--------->
GLK1(2)
------>
ZmHOX2a(1)
<-----------
ARR10
--------->
SPL7
--------->
TOE2(3)
<---------
ARR11(3)
--------->
LBD16
--------->
TOE1(3)
<----------
DOF2
--------->
ARR14(2)
<---------
LBD16
------>
MYB46(1)
--------->
MYB52(1)
<---------
ARR14(2)
--------->
MYB52(1)
------>
MYB83
<---------
WRKY38(1)
--
<---------
GLK1(2)
<----------
DOF2
-------->
P
<---------
WRKY12
<--------
taatggaacagaatcttcttcaaaccgctgtgcttaaccggacgtccttccatttccaacctcagagaaattggctcaacg
gttctatttctttcttttt
3839600
<---------
ANAC58
<-------
GAMYB
<------
MYB46(1)
<------
MYB83
--------->
MYB52(2)
--------->
ARR11(3)
--------->
AHL20(2)
------>
ZmHOX2a(2)
<---------
AHL20(2)
<---------
ANAC58
<---------
GLK1(1)
--------->
AHL20(2)
<---------
ANAC46
--------->
GLK1(1)
--------->
AHL20(2)
<---------
MYB46(3)
<------
ZmHOX2a(2)
--------->
AHL20(2)
--------->
MYB55(2)
--------->
ARR11(3)
<---------
AHL20(2)
<--------
P
<---------
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(2)
<------
ZmHOX2a(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
------>
ZmHOX2a(1)
<---------
AHL20(2)
<---------
AtMYB61
--------->
ARR11(3)
<---------
AHL20(2)
---->
ZmHOX2a(1)
--------->
AHL20(2)
<-----------
RAV1(1)
---------->
DOF2
<---------
AGP1
--
DOF2
<-------
TEIL
--------->
AHL20(2)
---------->
DOF2
---------->
DOF2
<---------
YAB1
cctcctatttatattcatatatatatatatatatatcatgttggttgtgaacaaaaaagaaaagatcatgttggcaaagatctcttatattattagttca
3839700
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
---------
--------------->
AGL15
----------->
GT1
<---------
YAB1
----------->
GT1
<<<<<<<<<
GATA-1
--------->
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
MYB52(2)
--------->
AtMYB61
<---------------
AGL15
<-----------
RAV1(2)
<---------
YAB1
--------->
MYB52(1)
taaaaccaaaacaaaaaaatggttaatttctgtttattgcaatttatctattgaatcaggttattaatttctactatatgatactgaaaactaacgattg
3839800
<---------
AHL20(2)
>>>>>>>>>
GT-2
--------->
MYB52(1)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
At5g28300
--------->
GLK1(1)
----------->
GT1
------->
TEIL
--------->
CCA1(2)
----------->
HVH21
--------->
ARR11(3)
--
<---------
At4g35610
<---------
ARR14(2)
<-
<---------
AHL20(2)
=================================
HOX2a_HOX2a
------
<---------
AHL20(2)
------>
ZmHOX2a(1)
<---------
ARR11(3)
------
--------->
AHL20(2)
----------->
RAV1(2)
--------->
ARR14(2)
------
>
ATHB12
<-----------
HVH21
--------->
At4g35610
--------->
AGP1
--------->
AHL20(2)
----------->
HVH21
tcttaattttatgtcacttctggtcctctgatgcattttggaaatctcaag
atccaaacg
gtaattaaatactctacaaattgctaacttgtgacacaag
3839900
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AGI:
At5g11920.1
Description:
ATCWINV6 (6-&1-FRUCTAN EXOHYDROLASE); hydrolase, hydrolyzing O-glycosyl compounds / inulinase/ levanase. similar to ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5), hydrolase, hydrolyzing O-glycosyl compounds / levanase [Arabidopsis thaliana] (TAIR:AT1G55120.1); similar to fructan 1-exohydrolase [Campanula rapunculoides] (GB:CAD49079.1); contains InterPro domain Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148); contains InterPro domain Glycoside hydrolase, family 32; (InterPro:IPR001362); contains InterPro domain Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189); contains InterPro domain Concanavalin A-like lectin/glucanase (In
Range:
from: 3839392
to: 3842372
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.