Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->AHL20(1)                                               --------->AHL20(2)                                               <---------AHL20(2)                                               <---------AHL20(1)                                        -------->HAHB4                                       <---------YAB1                                       --------->ICU4                                       ----------->GT1                                     --------->YAB1                                   --------->AHL20(1)                                    --------->ANAC58                          <------ZmHOX2a(1)   <---------AHL20(2)                         --------->ANAC58                         ----------->GT1--------->YAB1                            <---------ANAC55(1)              --------->AHL20(2)  --------->YAB1                                  <---------ANAC58             <---------YAB1     --------->AHL20(2)             --------->ARR11(3) --------->ANAC55(2)        ----------->GT1 <---------TOE2(3) <---------YAB1       <---------ARR11(3) <---------ANAC55(2) ----->AHL20(2)   <---------AHL20(2) <---------ICU4           <---------CCA1(2)   <---------ANAC46 -- ------AHL20(2)   --------->AHL20(2)--------->ICU4           ------->TEIL         <---------bZIP60(2) -->AHL20(2) --------->ICU4    --------->YAB1 --------->AHL20(2)                  <---------ANAC58 <-   aaaatacaattagttattatttatataaggaaataaaaataatgataaataaatttagacatgtatatctatgtaatagaaattacgtggtaagacatat  3370100                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                             --------                                                              <---------AHL20(2)     ================                                                             --------->AHL20(2)      ================                                                             <---------AHL20(2)      <----------ID1       ---------->DOF2                                <---------AHL20(2)             <------ZmHOX2a(1) ------->TOE2(3)            ---------->DOF2 <---------HSFB2a(2)           <---------AHL20(2)--------- ---------DOF2     --------->At4g35610      --------->HSFB2a(2)         <---------YAB1      <--------   actttaatacaaagatagactagctcaaacaaaagtctacggttttccaaaacgatttacttataaatttgggtattattttgtttaggaacaaataaat  3370200                                   --------->TOE1(2)                                  --------->ANAC58                                <---------ALFIN1                              --------->AtMYB61                              <---------ALFIN1                             --------->ANAC46        <-------TEIL       --------->DEAR3(1)        ------>ZmHOX2a(2)  --------->AtMYB61        <-----------------------TaNAC69(2)       <------ZmHOX2a(2)--------->DEAR3(1)      <---------ARR14(2)--------->AtMYB61      --------->ARR14(2)<---------ALFIN1                                              <---------AHL20(2)     <------ZmHOX2a(1) --------->MYB46(3)                                             --------->AHL20(1) ------AHL20(2)      --------->DEAR3(1)                                               --------->AHL20(2) ---->AHL20(2)       <---------ALFIN1--------->MYB52(1)                               <---------AHL20(1) -----AHL20(2)       --------->AtMYB61                                               <---------AHL20(2) ->AHL20(2)         --------->MYB46(3)   --------->CCA1(2)                           --------->AHL20(2) ==============HOX2a_HOX2a <---------ALFIN1                                        --------->YAB1 =============HOX2a_HOX2a --------->MYB46(3)           --------->At4g35610     <---------HSFB2a(2) >AHL20(2)        <---------ALFIN1--------->ANAC58     <---------At4g35610     --------->HSFB2a(2)--- -AHL20(2)        --------->ANAC46--------->ANAC46--------->CCA1(2)        --------->GLK1(1)      ---   aaatcgaggatccatggtctccaccaccaccaccacacctaagagatgcgagatttaagctccatttacaaaaactgagttccaaaaataaattagcaaa  3370300                                   <---------ANAC58                         <---------At4g35610  --------->ANAC58                <---------ARR11(3) <---------ANAC58           ------->GAMYB --------->At4g35610  --------->ANAC58           --------->TOE2(3)  <---------ANAC58--------->ANAC55(1)          --------->MYB46(3)  <---------ANAC58--------->ANAC46 ------>TOE1(3) --------->ARR11(3) <---------ANAC46         <---------MYB46(3)       <-----------GT1 ------>TOE2(3)<---------CCA1(2)  --------->MYB52(2)       <---------TOE1(2)       <---------ICU4  <-   ccctaattttcaaccacaaatctttggagcttacgttccttgatatacacgcctcttctccttggttcaatagcaaaatccaaaattattccatctagtt  3370400                                             <---------TOE2(3)                                             <---------TOE1(3)                  <------------CBF                                         <----------DOF2                  --------->HSFB2a(2)                                       --------------->AGL15           ------>ZmHOX2a(1)                     <<<<<<<<<TBF1     <---------------AGL15       <---------ARR11(3)           <---------ARR11(3)       <-----------GT1                --------->ARR11(3)           <----     ------>ZmHOX2a(2)        <---------GLK1(2)                   --------->GLK1(1)         <-------- ---------DOF2    <<<<<<<<<TBF1  --------->TOE2(3)                <---------GLK1(1)------------>CBF<-   cctttgatctcaaggtattcttcttcttctcatattcttaactctttaaggctggctactcttatttgatatccttctgaaatattgcaatttccttttt  3370500                    <---------ANAC58                    <---------ANAC46                    <---------ANAC58               <------MYB46(1)               <------MYB83              --------->MYB111(1)              --------->MYB111(2)              --------->MYB46(2)                 --------->YAB1              --------->MYB59              --------->TOE2(3)<---------ANAC46          <---------MYB46(3)         <---------AHL20(2)     --------->O2        <-------GAMYB             --------->MYB52(2)        <---------O2         --------->MYB52(1) -       <---------ANAC58         <---------MYB52(1)        ------->GAMYB       --------->ANAC46      - <------------CBF  *TSS       <---------MYB46(3) <---------ICU4               --------->ANAC58      - -------GT1 <---------MYB52(1)----------->GT1    -------->HAHB4               --------->ANAC58    --- --DOF2<---------ANAC58  <-----------RAV1(2)    <---------ATHB51         ------->GAMYB            <-- --------YAB1<---------MYB55(1)<-------GAMYB    --------->ICU4  --------->HSFB2a(2)      ----------->RAV1(1)   tctaattgtgcgttgttaggtagcgtctcaggtcgttatttgatttcttaataatggcaacgacgtctagtacaacgaaaacgaaacgggacaacaaaaa  3370600                                                                           ----------->HVH21                                                                          ------>ZmHOX2a(2)                                                                         <---------At4g35610                                                                        ------->TEIL                                                                        --------->ARR14(2)       <------ZmHOX2a(2)                                                <---------ARR14(2)      <---------ARR11(3)                                           --------->At4g35610      --------->AGP1          ---------->DOF2                      <---------At4g35610 -------->P               --------->ANAC58                     --------->ANAC58 ----->MYB46(1)           --------->ANAC58          ----------->RAV1(2) <---------AGP1 ----->MYB83            ---------->DOF2       <---------YAB1   --------->ANAC58 -------->MYB52(1)  --------->At4g35610       --------->At4g35610<-----------RAV1(2)           ------ ------>AtMYB61     <------NtERF2           --------->YAB1    --------->SPL7                   ------ -------MYB59     --------->ANAC46          <---------ICU4 <---------MYB52(2)  ------>ZmHOX2a(2)   <-   cctaaccagatcaaaatcactcggcagaaagccaaagccggtctcatcatcagagcctgaagcgaacgcagatggatctgatcggaaaacaattgggaag  3370700                                              --------->WRKY18(1)                                             <--------ZAP1               <------NtERF2                            --------->ZAT2   <-----------HVH21          <-----------HVH21                            <---------ZAT2  --------->LBD16             ------>NtERF2                            <---------At4g35610    <---------ARR11(3)  --------->DEAR3(1)                            --------->At4g35610    --------->ARR11(3)  <---------ANAC46  <---------HSFC1(2)    <---------MYB59  ------>MYB83       <---------ARR14(2)           ------->GAMYB       --------->HSFC1(2) --->ANAC58          ------>MYB46(1)    --------->ARR14(2)          --------->DEAR3(1)   --------->HSFB2a(1) --->ANAC58--------->At4g35610        <---------SPL7                --------->ANAC46     <---------HSFB2a(1) ---------DOF2     --------->TOE1(2)  ----------->HVH21    ---------->DOF2          --------->YAB1   cctttgcctaattatctgaaacctacaatcagctcgagaccggacccggtcaagttcttgagaaagaacaacgccgtcgaagaaaatcagaagcttcttc  3370800                                                                                            ---------                                                                                            ---------                                                                                           ----------                                                                                           --------->ZAT2                                                                                           <---------ZAT2                                                               ------>ZmHOX2a(2)         <---------ALFIN1                                                               =======================HOX2a_HOX2a                                                              <<<<<<<<<GATA-2          <---------ALFIN1                                                              <------ZmHOX2a(2)       <---------MYB55(2)                   ------>ZmHOX2a(1)                          <---------GLK1(1)       --------->MYB46(3)           --------->YAB1                                     ========================HOX2a_HOX2a        ------>ZmHOX2a(1)                                     <<<<<<<<<GATA-3        --------->ANAC58     <------ZmHOX2a(2)                                        <<<<<<<<<GATA-1        --------->ANAC58     =====================HOX2a_HOX2a                         <<<<<<<<<GATA-4      <---------ALFIN1     ========================HOX2a_HOX2a                     <---------ARR11(3)   --------->MYB46(3)    <---------ARR11(3)                                       --------->ARR11(3)------>ZmHOX2a(1)    <---------ARR14(2)                                       <---------AGP1  --------->At4g35610    --------->ARR11(3)      <----------DOF2       <---------At4g35610        ----------->RAV1(2)    --------->ARR14(2)------>ZmHOX2a(1)           --------->At4g35610        <---------At4g35610   gtagacgatcctttgatcatcctccttcgtctttgacttctccatcaacttcatcagcccatagatctctcaatacctctcctgcccacccacacctgcg  3370900                                                                              <-----------RAV1(2)                                                                 <---------At4g35610                                                                 --------->ZAT2               -------        <---------DEAR3(1)                                       --------->At4g35610         --------       --------->LBD16                                        <---------At4g35610          <---------ZAT14       <---------LBD16                             <----------DOF2       <------MYB83      --------->SPL7      --------->ANAC46                          <---------ARR11(3)<-----------RAV1(2)  <-------------     <---------LBD16                    <---------ANAC58      --------->At4g35610  <------ZmHOX2a(1) >TOE1(2)  --------->ARR14(2)           <---------ANAC58 --------->AtLEC2<------MYB46(1)   --------->ZAT14 >TOE2(2)<---------MYB46(3) <-----------HVH21  --------->REM1(1) <---------ZAT2 --------->At4g35610 ->RAV1(2) <---------ARR14(2)        <---------DEAR3(1)<---------AtLEC2 <---------AtMYB61<---------SPL7   agacaaacccgcggttccaagggagaagcctgtcactggtctgcgttctacatctttccatggaagcagcaggggaggtctcagaggaagcagtacggtg  3371000  Previous    Next  AGI:  At5g10660.1    Description:  calmodulin-binding protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24880.1) Range:  from: 3370519    to: 3371935    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.