Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------ANAC58                                   <---------ANAC46                                   ----------->GT1                                   <---------ANAC58                                 <---------ANAC46                               <-----------HVH21                              --------->ALFIN1                                          --------->At4g35610                            <---------ANAC55(1)                                         ----------->GT1                            <---------ANAC55(2)                      ------>MYB83 ---------->DOF2                          <---------ZAT14                            ------>MYB46(1)  <-----------RAV1(2)                      <------ZmHOX2a(1)               --------------->AGL15     --------->MYB46(3)                   =======================RAV        ----------------->AGL1    ------>MYB46(1)   ----------->GT1 <-----------RAV1(2)   <---------AHL20(2)   <------ZmHOX2a(1)------>MYB83 ---->ANAC46     --------->CCA1(2) <---------ANAC55(2)<---------------AGL15   ----------->RAV1(1) --- ---->ANAC58  <---------YAB1--------->ANAC55(2)      <-----------------AG     ====================RAV ---->ANAC58 <---------TOE2(3)<-----------RAV1(1)    <-----------------AGL1 --------->MYB46(3)  <----   gaaatcagtaaaattgatgatacaggagttaagtgtcgcgtataaaatcgctgtttcaacattaggaaaccaaacaaaaccaacaaaagcaggtgaataa  2761500                                                 --------->AGP1                                           --------->ANAC58                                           --------->ANAC58                                           --------->ANAC46                                          ------->GAMYB                                    --------->YAB1                                    <---------ICU4<------ZmHOX2a(2)                                 <                                   <---------ATHB12                     <----------DOF2 --------->ZAT2                                 --------->WOX13(1)------>ZmHOX2a(2)  --------->LBD16   <---------ZAT2   <---------ATHB12            <------ZmHOX2a(2) <---------ARR11(3)   ------>NtERF2     --------->At4g35610 ------>ANAC46                --------->AGP1     --------->ARR11(3)  --------->RAP2.6(2)<---------At4g35610 -------GT1                   <---------ARR11(3) <---------AGP1 --------->At4g35610   <-----------RAV1(2)   acccaatcgctctaaatcgataagctcgaccagatcaatcataacccgctagatctatgtataagaagatgccgcattttgaaattgttcagctgaattc  2761600                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                           ----------                                                --------->HSFB2a(2)                      <---------YAB1                                                <---------HSFB2a(2)                   <------ZmHOX2a(2)            ---------->DOF2                   <------ZmHOX2a(2)                      <---------ARR11(3)         --------->ANAC58            --------->MYB46(3)                              --------->ARR11(3)         --------->ANAC46           >>>>>>>>>MYB98                                  <---------GLK1(1)         --------->ANAC58       --------->TOE2(3)          ----------->GT1    --------->MYB52(1) <--- ---------ARR11(3)              --------->TOE1(3)   ----------->GT1--------->TOE1(2)--------->GLK1(1)   aagataaatacactcaaagtcttaattttgaaaaccctaacaaatgcgatcgagaagaaaatcgtataacctagaaatgaaaacggagatcatcaaagtg  2761700                                                                                            ---------                                                                                           --------->ZAT18  --------->LBD16                                                             ------>ZmHOX2a(1) ---------ZAT14              --------->ANAC58                               ----------->RAV1(2) -------->ZAT18              ----------->GT1                                ========================= ---------ZAT18              --------->ANAC58      <----------DOF2    <----------DOF2 --------->REM1(2) ------ANAC58   <---------ANAC58        --------->LBD16       --------->CCA1(2)    <---------ANAC58 >DOF2---------->DOF2     <----------ID1--------->HSFB2a(2)   --------->GLK1(2)    <---------ANAC46 ------ANAC58   <---------ANAC58        <---------HSFB2a(2)  --------->ARR11(3)    <---------ANAC58   agtgcgcgaaaagagattgcttaccatggagacgaaaatttccgagaagtagtctttcagagagatactggtctttgttcctgaagcgtgaaggccacaa  2761800                                             --------->ZAT2                                             <---------ZAT2                                             --------->O2                                             <---------TGA1a                                             <---------O2                                             ----------->RAV1(2)                                             --------->TGA1a                                        <---------ZAT18                      <------MYB46(1)                                 <---------ICU4                              <------MYB83                  --------->ANAC58  <-----------GT1                         *TSS  <---------TOE2(3)     <---------ZAT2              --------->YAB1                           <---------MYB52(1)     --------->At4g35610   ----------->GT1 <---------ALFIN1           <---------At4g35610   --------- -->RAV1(1)       --------->ANAC58  <---------ICU4                 --------->CCA1(2)        ------>NtERF2 ===RAV          <---------LBD16<---------YAB1      --------->DEAR3(2)--------->At4g35610 <---------LBD16   gaatgggagcttgaacagacacggagacgaagttataatcactgcccacctgagaccgacgaactcgagataagctgtttggtttagattactccgcgtc  2761900                                                                                             --------                                                                                            ---------           <---------GLK1(2)                                                  ------>ZmHOX2a(1)      <---------MYB52(1)                                        <---------MYB52(1)          ---------   <---------TOE2(3)                                         <---------LBD16 --------->TOE1(3) ----------->TGA1      <---------AHL20(2)             --------->GLK1(2)      --------->TOE2(3) >LBD16  <---------TOE1(3)                         --------->ARR14(2) ------->TEIL         <---------TOE2(3)   ttcttgacgttaagcttctctctattttatgggcctctcttggtccaggcccaaatattctggtccggtatgaaactatcctaaacttcgataaacgtaa  2762000                          ---------->DOF2                       --------->AHL20(2)                       --------->YAB1                      --------->ICU4                                                                -                      <---------YAB1                                                        ---------                    --------->YAB1                                   <----------DOF2       --------->ANAC55(2)                   <---------ATHB51                                <------NtERF2           --------->ANAC46                   --------->AHL20(2)                            <---------ANAC46     --------->At4g35610   --------->ALFIN1<---------AHL20(2)                            <---------ANAC58     <---------At4g35610 <-----------RAV1(1)<---------ICU4                               <---------ANAC58 <-----------GT1   < ->TOE2(3)         --------->ICU4                        --------->TOE1(2) <---------YAB1 <---------HSFB2a(2) >ANAC46   <---------ARR14(2)                           --------->YAB1   --------->YAB1   <---------LBD16 -->GT1    --------->ARR14(2) *TSS         --------->YAB1--------->TOE2(2) <---------AHL20(2) -------   aatatgtgggtcgaatatgaaataattataaagtattgggaacaattagcatttagaaacataagaggcgtctttttataattttctcagttcccgtaag  2762100                                     <---------MYB46(3)                                     <---------DEAR3(2)                                    --------->ALFIN1                                  <---------DEAR4(2)                     <---------MYB46(3)                   <------NtERF2 <---------DREB2C(2)                 --------->ATERF1(2)<---------AtMYB61                 <---------ATERF1(2)<---------DEAR3(1)                                             --                 <---------DEAR3(1)<-------GAMYB                                            ------>ZmHOX2a(2)     <---------At4g35610    ---------->DOF2                                                <------ZmHOX2a(2) <------ZmHOX2a(2)------>NtERF2  <---------DEAR3(1)                                       <---------ARR11(3) -------->ARR14(2)--------->LBD16--------->ALFIN1                                         --------->ARR11(3) >LBD16         --------->RAP2.6(3)<------NtERF2                                          --------->ARR14(2) ---------ARR14(2)<---------ATERF1(1)--------->MYB55(2)                                   <---------ARR14(2) -->SPL7      --------->ANAC46--------->DAG2         <------ZmHOX2a(1)                <---------At4g35610   acgatccaactgctacaggccggcgattagcaaaggcggtggttcgatagagagaggaagagattgaagcgattttcactcagttttcatcagatcgtct  2762200                                                                                          --------->ARR11(3)                                                                              --------->YAB1                                                                              <--------HAHB4                                        <---------ANAC58                     <---------YAB1                                        <---------ANAC58            --------->LBD16       --------->AHL20(1)                                  ----------->HVH21                <---------ANAC58 --------->TOE2(3)                                  --------->WRKY38(1)              <---------ANAC46 --------->YAB1                                <---------ANAC58                   <---------ANAC55(1)    <---------AHL20(2)                                <---------ANAC58               --------->GLK1(1)  --------->ARR11(3)                                <------MYB83                   <---------GLK1(1)  <---------ARR11(3)             --------->ATHB12   <------MYB46(1)               ----------->ARR10 <---------YAB1<------            <-------TEIL       <---------MYB46(3)  --------->ANAC55(2) <---------CCA1(2)  <---------AHL20(1) ------->At5g28300             <---------DEAR3(1)<-----------GT1   <---------ANAC58<---------YAB1<---   cggtgattctagggttcattggtctcgttttgttcggtgactgcttgagtttcacgtttttggtgagttccgtctatctattattatcttaatattttga  2762300                                                  --------->YAB1                                               --------->YAB1                                              --------->ICU4                                          <------ZmHOX2a(1)                                         --------->ANAC46                                        --------->LBD16                                       <---------LBD16                                       --------->HSFB2a(2)                     <---------AHL20(2)                                       <---------HSFB2a(2)                   <----------DOF2                                 <---------AHL20(1)              <---------ANAC58       <-------TEIL              --------->AHL20(2)              <---------ANAC58 ---YAB1       ----------->GT1   <---------AHL20(2)           <---------ARR14(2)      ------->TEIL<-- ------YAB1  <---------ANAC46    --------->AHL20(1)           --------->ARR14(2)  <---------WOX13(1)   tgattcaggctcatggtttgtgaaatttgctctaatttattccaggaaataatcaacataagcgaattcttgtgtttggctttaattgaaccctgaattt  2762400  Previous    Next  AGI:  At5g08530.1    Description:  CI51 (51 KDA SUBUNIT OF COMPLEX I); NADH dehydrogenase (ubiquinone). similar to hypothetical protein [Vitis vinifera] (GB:CAN73193.1); similar to hypothetical protein OsJ_024351 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40868.1); similar to NADH dehydrogenase [Solanum tuberosum] (GB:CAA58823.1); contains InterPro domain NADH-ubiquinone oxidoreductase, 51 kDa subunit; (InterPro:IPR011538); contains InterPro domain NADH-ubiquinone oxidoreductase, 51 kDa subunit, conserved site; (InterPro:IPR001949); contains InterPro domain NADH-ubiquinone oxidoreductase, F subunit; (InterPro:IPR011537) Range:  from: 2759318    to: 2761876    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g08535.1    Description:  D111/G-patch domain-containing protein. similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G52350.1); similar to nucleic acid binding protein [Brassica rapa] (GB:ABL97951.1); contains InterPro domain D111/G-patch; (InterPro:IPR000467) Range:  from: 2762030    to: 2763437    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.