Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>ZmHOX2a(2)                                                           <---------MYB59                                                          <------ZmHOX2a(2)                                                         <---------AGP1                          ----                                                         --------->ARR14(2)                     -----                                                         <---------ARR14(2)                 <--------          <---------YAB1                                 --------->AGP1                     <--------       <---------AHL20(2)                                <-----------ARR10                  ---------     ------->TEIL                                        --------->ARR11(3)                 ---------  <---------YAB1                                         <---------ARR11(3)              --------->YAB1 --------YAB1           --------->AHL20(2)           <---------At4g35610                <---------ATHB51 ------ZAT6             <---------AHL20(2)           <---------ZAT2    <---------GLK1(2)<---------ATHB12 --MYB52(1)   ------>ZmHOX2a(2)       <-----------HVH21 <---------CCA1(2)          --------->GLK1(2)   tattatgaatttatgatccagtctaatttaagaacatatgggtcagttttctgcgagcagatctaacttatcaaattctctcaagaatcaataataaaat  2641300       --------->MYB46(3)     ----------->RAV1(1) ----->TOE2(3) ------>GT1                                         XXXXXXXXXXXXXXXXXXXX>MIR166A-G <-----------HVH21 -AHL20(2)                                          -------->P            ------>MYB83 -AHL20(1)                                         <-----------GT1        ------>MYB46(1) >AHL20(1)                           --------->AHL20(2)                 <---------MYB59 >AHL20(2)--------->ARR14(2)  ----------->GT1    <---------MYB52(2)------>ZmHOX2a(1)           <-----   gttaatccaacaaatctacaaaaatttgcaagtgtttaaaaatataaaacatctaaccagacttcaatcctcgacctatctactatgtcaaatagacatg  2641400                                                                                                   <-                                                                                                 <---                                                                                                 >>>>                                                                                                 ----                                                                                                 >>>>                                                                                                -----                                                                                                <----                                                                              <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                              <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                             <---------ATHB12      --------->MYB52(1)           -----                                          --------->AtMYB61    --------->ANAC58              --------                       <---------YAB1  --------->AtMYB61       --------->ANAC58             ---------                   <---------MYB52(1) --------->MYB46(3)       --------->ANAC46         <---------At4g35610                  <-------GAMYB     --------->bZIP60(1)     ----------->HVH21 <---------ALFIN1  <----                <------NtERF2       <---------bZIP60(1)   --------->At4g35610 <XXXXXXXXXXXXXXXXXXXXMIR834           --------->HSFB2a(1)   ----------->HVH21        <---------At4g35610 <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <---------HSFB2a(1) --------->At4g35610        ------>NtERF2       --------->AtMYB61------ ----YAB1---------->DOF2       <---------At4g35610      <---------RAP2.6(2)  --------->MYB46(3)------   atacaaaaatagaaagtccccgttgatgactgcttctgacaccaccaatgcttccattgccgctcacgctatcggcattaccaccgctactgctaccaac  2641500        --------->ZAT2        --------->At4g35610 ----------HVH21 ----MYC3                                                                --------->MYB52(1) >>>>>>BZIP12                                                          <------NtERF2 --->MYC3                                                              <---------ZAT2 >>>>>>ABI5                                                            --------->At4g35610 ---->O2<---------ZAT2                                                 <---------At4g35610 -----O2<---------At4g35610                     <---------YAB1      <------NtERF2 ---->TGA1a                       <---------AtLEC2              <---------MYB46(3) ->AtMYB61                        <---------ANAC58      <---------RAP2.6(3)               <---------ANAC58 >MYB46(3)               <---------ARR14(2) <---------ANAC58   <---------AtMYB61          <---------ANAC58 -----TGA1a              --------->ARR14(2) <---------ANAC58   --------->ALFIN1      <------ZmHOX2a(1) >MYB46(1)          <---------At5g28300------->TEIL     --------->At5g28300  --------->At5g28300 >MYB83 ----------->RAV1(2)       <---------ANAC58     --------->RAP2.6(2)  ----------->GT1         <   gtgtcataccagctgctactatcaccgtttccacttgcatgaattttcttgtgatggccgtaatagtggtggcagcaacggttaaaaggatggcttaaca  2641600                ----------->GT1                <---------MYB46(3)               <---------DEAR3(1)                                                         --------->ANAC58               <---------AtMYB61            --------->YAB1                           <---------------AtSPL3               --------->ALFIN1             --------->ATHB12                         <---------------AtSPL8            --------->ALFIN1               <---------YAB1                  <------------CBF    ------     <---------At4g35610     <-----------HVH21                             *TSS<---------TOE2(3)<----     --------->At4g35610    <-----------RAV1(1)                           --------->ATHB12--------->ANAC58    XXXXXXXXXXXXXXXXXXXX>MIR834 --------->At4g35610                       <---------AHL20(2) ------->TEIL  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->AHL20(2)        <-----------RAV1(1) --------------->AtSPL3 -------TEIL<---------DEAR3(1)  <---------At4g35610     ----------->GT1  --------->ICU4  ------------   tgttcgtagcagaagcggtggtgattttggctgtcgctgaaaaaaatgatagcacaactggtaacatatgttgtatttattgaggtagaagtacgaacct  2641700                                                                                                    -          --------->YAB1                                    --------->ANAC58                        <     ------------>CBF                                       --------->ANAC58                     ----   ------>ZmHOX2a(1)                                  <------------CBF                  --------->ANAC58 --->TOE2(3)         --------->ZAT6           --------->TOE2(3)                ----------->RAV1(1) <- ------DOF2    ----------->GT1                --------->TOE1(3)     <-----------------AG--------->ANAC58 --->AtSPL8  ---------->DOF2        <-----------GT1------------>CBF <-----------------AGL3      <----   ttatcctcacaatcagaaagttaagactaagcgttgttttacatttagccttaaacaattgaacgaaatagacatttttggcaacatggaacgatacagt  2641800 ----------->GT1                        ----------->GT1 -------->HSFB2a(2)                    <---------TOE1(3)              --------->ANAC58 ---------HSFB2a(2)                    <---------TOE2(3)              --------->ANAC58            <-- ----->GLK1(2)                         <---------YAB1   <---------AHL20(2)                     <----- --------ANAC46           --------->TOE2(2)             --------->AHL20(2)                 <--------- -----GLK1(2)   <---------YAB1 --------->DOF5.7(2)   <----------DOF2---------->DOF2     <-----------GT1   ttctggtaaattacatttatgcttataatctacgtttacttatggttataatctacttttaattcatgtagaaagcactagttactgaaatcactttcta  2641900                                   <---------AHL20(2)                                   --------->AHL20(2)                                   --------->YAB1                                     --------->TOE1(2)                                --------->YAB1                                        --------->TOE2(2)                              <---------YAB1                                     --------->LBD16      --------->AHL20(1)--------->ZAT14                                         --------->HSFB2a(2)      <---------AHL20(1)<---------ZAT18        <-----------GT1                  <---------HSFB2a(2)      <---------ARR11(3)<---------ZAT14   ----------->GT1                 <---------AHL20(2) --------DOF2        <---------DEAR3(2)<-----------GT1                    --------->AHL20(2) ------GT1          ------>ZmHOX2a(2) --------->ARR14(2)                 --------->AHL20(2)        -- -DOF2--------->ARR11(3)<-------TEIL  <---------ARR14(2)    <----------DOF2    <---------LBD16     <-   ctttctaaaatattctattagatcggttcactattaataatatacggtttaaccagtttgggctcttcgttgctatttatttcccgaacatacgatttta  2642000               --------->TOE2(3)         --------->ATHB12         <---------ICU4        <---------YAB1                                                                           <---        --------->ICU4               <---------GLK1(2)                                        ------- --------->AHL20(2)       --------->ANAC46                                                    <------ ------->AHL20(2)    <---------ARR14(2)                                       <-------TEIL<---------- --------AHL20(2)    --------->ARR14(2)      ------>ZmHOX2a(2)       <---------YAB1  <---------AHL20(2)   aaaaaatatacttattgccttaatatccactaaacatctgattctgatctataagttttcaatcttccattttcattaggctcatgttttattttcagct  2642100                                                                                           <---------ALFIN1   <---------DAG2                                              <---------ARR14(2)       --------->ANAC46   <----------DOF2                                 ----------->GT1                 <---------ARR14(2) ------WRKY38(1)       <-----------GT1             <---------ANAC55(2)             --------->ARR14(2) -->At4g35610   <------ZmHOX2a(2)     ----------->GT1          --------->ARR14(2)  ------->TEIL ---At4g35610  --------->ARR11(3)     <----------ID1--------->TOE2(3)         ----------->GT1<------- -GT1          <---------ARR11(3)   --------->MYB52(1)---------->DOF2    <---------------AGL15   caacgcttttcattcaagatcattttaaccaaaaaacaaaacgaaaaaaaaaaacgtaaaacgagtatatgtttactaaatggtgaatcttcgacacact  2642200  Previous    Next  AGI:  At5g08210.1    Description:  MIR834a; miRNA Range:  from: 2641427    to: 2641675    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.