Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <-------GAMYB                                    <---------ANAC46                                    <---------DEAR3(1)                                   <------NtERF2                                   --------->ATERF1(1)                                  <---------RAP2.3(1)                                  <---------RRTF1(1)                                  <---------ATERF1(1)                                  ------>NtERF2                                  <---------DEAR4(2)                                  <---------ORA47(2)                                  <---------ERF1                                 <---------RAP2.3(3)                                 --------->DEAR3(1)                                 <---------RAP2.3(2)                                 <---------RRTF1(3)                                 <---------DEAR3(1)                                --------->ATERF1(1)                                <---------ABI4(1)      --------->At4g35610       <------NtERF2      <---------At4g35610      <---------ATERF1(1)                                        --------->CCA1(2)   --------->LBD16             <---------DEAR4(2)              --------->HSFB2a(2)       --------->ARR14(2)  <---------ANAC46             <---------ORA47(2)              <---------HSFB2a(2) <-----------RAV1(1) <---------LBD16               <---------RAP2.3(1)            <---------LBD16      --------->ICU4 --------DOF2                 <---------RAP2.3(2)        --------->ARR14(2)    ---------------------- ----->GT1           --------->TOE1(2)                --------->ANAC58         <---------RAP2.6(3)  < -MYB46(1)    --------->ANAC58<---------RAP2.3(3)     --------->ANAC58         <-----------TGA1  <--- -MYB83       --------->ANAC58<---------DEAR3(1)  --------->ETT(2)  <------ZmHOX2a(1)    <---------ARR14(2)   ttttacggagatgagctcgtaatcgaacgaagacggcggcgttgaagctatgtcgaaaggaacttctggaggagttagagtcgtcatgttggatatggat  1918800                                  <------NtERF2                                 ------>NtERF2                                 <---------RRTF1(1)                                 <---------ERF1                                 <---------RAP2.3(1)                                <---------bZIP60(1)                                <---------O2                                <---------DEAR3(1)                                <---------ATERF1(2)                                <---------RRTF1(3)                                <---------RAP2.3(3)                                <---------RAP2.3(2)                   --------->ATERF1(1)        <------NtERF2           --------->ATERF1(2)       --------->LBD16          <---------RAP2.6(2)      <---------DEAR3(1)        <---------RRTF1(2)      <---------ANAC46       ----------->HVH21     <---------LBD16--------->DEAR3(1) --------->ARR14(2)                                          <-   <---------DEAR3(1) <------NtERF2   <---------ARR14(2)                                          <--   --------->ANAC46<---------LBD16<---------LBD16                                             <------  --------->SPL7   <------NtERF2<---------ANAC46                          <------MYB46(1) <---------- ->TaNAC69(2)    <---------DEAR3(1)   --------->ARR14(2)        <------------------------ANAC81<----- ---------SPL7  --------->ATERF1(1)   <---------GLK1(2)      <----------DOF2  --------->MYB52(2) ---- ---------------SPL14--------->LBD16 <------NtERF2      <<<<<<<<<TBF1     <------MYB83  *TSS<--------   tttgtacggcggagttgagtcgccggagattgtgacggcggaatctccatagtctttcttcttctttttttttgtttggtttgtttgtgagtttgtggct  1918900                                             --------->ARR11(3)                                        <---------ICU4                                        -------->ATHB1                                        --------->ATHB12                                        --------->ATHB51                                        <--------ATHB1                                       --------->ICU4                                       <<<<<<<<<<AGL22                                       <---------ATHB51                                       <---------ATHB12                                       <<<<<<<<<<AGL24         <---------ANAC46              <<<<<<<<<<AGL20                                   --------->ICU4         <---------ANAC58              <---------YAB1--------->YAB1                    <---------AHL20(2) --------WOX13(1)             <------ZmHOX2a(1)------>ZmHOX2a(2)                      <---------AHL20(2) ----------CBF                ========================HOX2a_HOX2a                     --------->AHL20(2) ---At4g35610             ============================HOX2a_HOX2a             <-----------RAV1(1)   - -RAV1(1)<---------ANAC58 <------ZmHOX2a(1)  <---------ARR11(3)     <-----------GT1   --------->ICU4< ----ANAC46             <---------TOE2(3)<------------CBF   ------->TEIL<---------ARR11(3)          - ----->ATHB12      <---------TOE2(3)------------>ATHB5      <-------TEIL--------->ARR11(3)    ------- -RAP2.6(2)       ---------->DOF2  ------------>CBF <---------YAB1 ---------->ID1----------->GT1   --   gattgggttttgcgagtgtttaaagtaaggaaggaggtccaattattgatctctatgatatgtacatttgtcactatcttgtgttgtattaattagtaaa  1919000                                      <---------WOX13(1)                                    --------->ATHB12                                   --------->ICU4                                   <---------YAB1                                 --------->YAB1                                <---------YAB1                              <--------HAHB4                              <---------ICU4          <----------DOF2     --------->ATHB51     --------->DOF5.7(2)      -------->HAHB4  <-------TEIL                <---------AHL20(2)                                        <---------YAB1 --------->CCA1(2)            -------->ATHB1                                         <---------YAB1 --------->ARR14(1)           --------->YAB1                                    --------->ATHB12 -------->ARR14(2)           <---------ATHB51                  <-----------GT1 --------->ICU4 ---------ARR14(2)           --------->ICU4             --------->ANAC58      <---------WOX13(1) -------->ARR11(1)           <---------YAB1             --------->ANAC58    <------ZmHOX2a(1) --->DOF2 <---------DAG2--------->TOE2(3)         --------->ARR11(3)      <---------TOE1(3)         < ------->CCA1(2)      <---------AHL20(2)          <---------ARR11(3)      <---------TOE2(3)         -   gagatacgtttactttatttgtattttcttaattattatgattggaatggaagatagtaggcaaattacaaaatttaaggattgattactatttttgatg  1919100                                ------->GAMYB                               <---------MYB55(2)                               --------->MYB46(3)                      <---------ARR11(3)                              -------->P                      --------->YAB1                              ------>MYB83                   <---------YAB1                              ------>MYB46(1)              --------->YAB1                    --------                        <---------GLK1(1)                  <---------ICU4                  <---------LBD16                   <---------LBD16                        --------->ICU4                <---------SPL7               --------->AHL20(1)                      <---------AHL20(2)      <---------ALFIN1               <---------AHL20(1)                      --------->AHL20(2)--------->YAB1<---------ANAC58               <---------AHL20(2)             <---------ARR11(3)       --------->ARR11(3)<---------ARR14(2)               --------->AHL20(2)   --------->TOE2(3) --------->AHL20(2)<---------YAB1 <---------ANAC58         ----------->GT1--------->GLK1(1)     --------->ARR11(3)      --------->YAB1  <------NtERF2 ---------YAB1 <---------ARR11(3) ------>MYB46(1) <---------YAB1     <---------YAB1 --------->ALFIN1 -------->ICU4 --------->ARR11(3) ------>MYB83<---------GLK1(2)---------->DOF2<---------REM1(2) <----   tgaagattagatggaaatatattcggaaatccaaccagcctaaaaatagattttgatttaattatcaaagtatgatcatcaacacggtgtcgttccggtt  1919200     --------->KAN4(2)    <---------HSFC1(2)                          <----------DOF2                  --------->ANAC46    --------->HSFC1(2)                        <---------At4g35610                --------->ANAC58   -    <---------KAN4(1)                         --------->At4g35610       ---------->ID1             --    --------->KAN4(1)               --------->HSFB2a(2)                 <---------CCA1(2)          --    --------->HSFB2a(1)             <---------HSFB2a(2)            <---------GLK1(2)          <------    <---------HSFB2a(1)          <---------ARR11(3)                <---------ARR14(2)  <---------ALFIN1 ->LBD16       <----------DOF2   --------->GLK1(2)   <------MYB46(1) <-------TEIL--------->ANAC58<--- ---TEIL      *TSS               --------->ARR11(3)  <------MYB83  --------->ARR14(2) ----------->HVH21   catcgaacattccacttctttcttcttgtctgaaaaatctagaagagcagctatttggtttctctatccgattcgtctctctcacgccctcacgtttatc  1919300                                              --------->YAB1               ------>MYB83                  <---------ATHB12               --------->ANAC46          --------->MYB46(3)             <---------MYB59           <-----------GT1       ------>ZmHOX2a(1)     <---------------AGL15      --------->TOE2(3)      <----------DOF2------>MYB46(1) -------->AtMYB61       --------->ARR11(3)  ------>MYB83                                 <------NtERF2 ------->ANAC46------>MYB46(1)      --------->ANAC55(2)                                <---------ANAC46 ------->bZIP60(2)      <---------ARR11(3) --------->WOX13(1)                          <---------ANAC58 -----GT1  >>>>>>>>>>MYB80   --------------->AGL15                             <-----------HVH21 ------ALFIN1--------->AtMYB61      <---------ANAC55(2)             <---------ZAT14    <---------ANAC58   cacctcatcctcaaaccaaaccacaagacctcttttttaagtaaccaatcacagagagatagagagagagaacagagtcaatgtcaatggcgtctatagc  1919400              --------->ANAC58              --------->ANAC46              ------>MYB83              ------>MYB46(1)            --------->AtMYB61                                                 <----------DOF2            <---------MYB111(2)                                       ------>MYB83            --------->DEAR3(1)                                        ------>MYB46(1)            <---------ALFIN1                                          -------->P   --------->LBD16           --------->MYB46(3)          <<<<<<<<<TBF1                 ------>ZmHOX2a(1)    --------->YAB1    <<<<<<<<<TBF1           ------>ZmHOX2a(1)                 <---------CCA1(2)    <---------LBD16 <<<<<<<<<TBF1--------->ANAC58--------->STY1(1)            <----------DOF2<---------CCA1(2)   ttcttcttcttccaccaccctactctcttcctctagggttcttcttccctccaagtcttctcttttatctcctaccgtctctttccccagaatcataccc  1919500                                                                           --------->ANAC58                                                                           --------->O2                                                                           <---------O2                                                                           <---------TGA1a                                                                           --------->ANAC46                                                                        ----------->HVH21                                                                      --------->ANAC46                                                                     ------>NtERF2                                                                     --------->LBD16                                                                    <---------ALFIN1                                                               ======================MYC_MYB                                                               ------->GAMYB                                                              <------------AtMYB77                                                              --------->MYB46(3)           <------NtERF2                                                              =======================MYC_MYB                                                             ------>MYB46(1)      --------->HSFB2a(1)                                                             ------>MYB83  --------->TGA1a<----------                                                             -------->P<-----------HVH21  <---------RAP2.6(3)                                                             ========================MYC_MYB                                                            --------->MYB55(1)    --------->HSFC1(2)                                                            --------->MYB52(1)    <---------HSFB2a(1)                                                           --------->DEAR3(1)     <---------HSFC1(2)                                                           --------->AtMYB61     --------->ARR14(2)                                                           <---------MYB111(2)   <---------ARR14(2)                                                           <---------MYB55(2)    <-----------ARR10                                --------->ARR14(2)         <---------ALFIN1--------->ANAC58--------->WRKY18(1)                              --------->LBD16              <---------MYB46(2)   <------NtERF2                             <---------ANAC46              <---------MYB111(1) --------->LBD16               ------>ZmHOX2a(1)<---------GLK1(2)          --------->MYB46(3) --------->RAP2.6(2)  <-      <------NtERF2          <---------ANAC58             --------->MYB46(3) <---------LBD16<--------    --------->ANAC46         <---------ANAC55(1)       --------->MYB46(3)<---------ALFIN1 ------>NtERF2   <---------LBD16           <---------ANAC58  <---------ARR14(2)   --------->DEAR3(1)   --------->DEAR3(1)   ------>ZmHOX2a(1)        <---------LBD16    --------->ARR14(2) <---------ATERF1(1)    --------->RAP2.3(3)   tcttcctcggcatcatcctcttctctctgttccgggttctccagtctcggttccctcaccaccaaccgctccgcctcacgccggaacttcgccgtcaagg  1919600                                                                                             <-------                                                                                             --------                --------->ANAC58                                  <---------WOX13(1)       --------->YAB1                --------->ANAC58                                  <---------YAB1        ----------->GT1                --------->ANAC46                                 >>>>>>>>>ARR1        <---------ANAC58           --------->WRKY38(1)   <---------ANAC46                >>>>>>>>>ARR2      --------->MYB52(2)           --------->WRKY12      <---------ANAC58               --------->YAB1    <---------MYB52(1)< -HVH21  --------->At4g35610     <---------ANAC58               --------->ATHB12  --------->DOF5.7(2) ----------RAV1(2)         --------->AHL20(2)                  <---------YAB1    --------->TOE2(3)  - -WRKY12 <---------At4g35610   --------->ARR11(3)    <---------YAB1<---------MYB46(3) <---------ANAC58   ctcaggctgtaagttgactcgcaatgccataaatttcttgtatttgctccatcttctcattcactatgattgttgtatgaattcgttagcttgttataat  1919700  Previous    Next  AGI:  At5g06280.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN67410.1) Range:  from: 1917642    to: 1918888    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g06290.1    Description:  2-cys peroxiredoxin, chloroplast, putative. Identical to 2-Cys peroxiredoxin BAS1-like, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9C5R8;GB:Q9FED5;GB:Q9FNH9); similar to 2-cys peroxiredoxin, chloroplast (BAS1) [Arabidopsis thaliana] (TAIR:AT3G11630.1); similar to 2-Cys peroxiredoxin [Brassica napus] (GB:AAG30570.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 1919214    to: 1921426    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.