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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AtLEC2
<---------
ICU4
<---------
YAB1
------>
ZmHOX2a(2)
--------->
ANAC58
<---------
At4g35610
<---------
ARR14(2)
--------->
ANAC46
--------->
At4g35610
--------->
ARR14(2)
--------->
ANAC58
<----------
DOF2
---
HVH21
--------->
ARR11(3)
----------->
GT1
<---------
ARR11(3)
<---------
TOE2(3)
------
agaaattagcatatattgaatgcgagattacaaatactaggtaattcaagctagataatcaatgcaagttgtgttcatttagatttactttgatctgaag
1549900
-
----
<---------
ANAC58
-----
<---------
ARR14(2)
=====
<-----------
RAV1(1)
<--------
<---------
AHL20(2)
<---------
ANAC58
---------
<-----------
GT1
--------->
ARR14(2)
<----------
DOF2
<--------
HAHB4
------>
ZmHOX2a(2)
============
--------->
ATHB51
<------
ZmHOX2a(2)
<---------
AHL20(1)
<---------
ICU4
<-----------------
AGL1
--------->
ARR11(3)
-------->
ATHB1
<---------
ARR14(2)
--------->
AHL20(1)
--------->
ICU4
--------->
ARR14(2)
<---------
ARR11(3)
--------->
GLK1(1)
<---------
ARR14(2)
<---------
MYB46(3)
<-------
TEIL
--------->
RVE1(1)
--->
bZIP60(1)
----------->
ARR10
<----------
DOF2
<---------
ANAC46
--------->
CCA1(1)
tcatatgtgagaaatcaaactaatccgagtagatttgaattattaacttttgttggatccgatttggcctggttcatactacagaaaatatctttcagaa
1550000
------->
MYC3
--------->
TGA1a
--------->
O2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--
<---------
ARR11(3)
<---
--------->
ARR11(3)
<---
--------->
AGP1
<---
<---------
AGP1
<----
--------->
HSFB2a(2)
<----
<---------
HSFC1(1)
<----
--------->
HSFC1(1)
-----
>>>>>>>
ZML2
===================================
bZIP_DOF
<----
<---------
HSFB2a(2)
<------
MYB46(1)
-------->
ARR11(3)
<-------
MYC3
---------
----->
DAG2
<---------
TGA1a
========================
----->
DOF2
<---------
O2
---------->
DOF2
---------
==========================
bZIP_DOF
--------->
DAG2
==============
-
HSFB2a(2)
--------->
MYB52(1)
--------->
DAG2
<---------
RAP2.6(3)
<-----
>
HSFB2a(2)
--------->
MYB46(3)
<---------
YAB1
---------->
DOF2
---------->
DOF2
==========================
bZIP_DOF
<----------
DOF2
---------->
DOF2
--------->
RAP2.6(2)
<------
MYB83
aagttctagatctaaacaaacgtgtctgatttagaacagtaagctttactatgctaaacaaaaagcttggataaagccgaaaagagagtcaaagtaggtc
1550100
--------->
ANAC58
<--------
--------->
ALFIN1
---------
-------->
ABF1
---------
<-------
MYC3
<--------
------->
MYC3
<--------
<-------
MYC2
---------
<-------
PIF5
<--------
------->
PIF5
<--------
------->
MYC4
<--------
<---------
GLK1(2)
--------->
ANAC58
<--------
---------->
DOF2
<-------
MYC4
----------
==========================
bZIP_DOF
----------->
HVH21
--------->
HVH21
------->
MYC2
----------->
TGA1
------
DEAR3(2)
--------->
O2
<---------
YAB1
---
MYB46(1)
<---------
O2
--------->
YAB1
---
MYB83
<---------
TGA1a
=======================
-----
DEAR3(1)
>>>>>>>>>>
HY5
<---------
TGA1a
-----
DEAR4(1)
>>>>>>>>>>
AtMYC2
--------->
ANAC58
-----
DREB2C(2)
>>>>>>>>>>
ABI5
<---------
ZAT2
--------->
TGA1a
---->
MYB46(2)
--------->
TGA1a
--------->
ZAT2
--------->
ANAC58
-----
MYB46(3)
--------->
ANAC55(2)
--------->
ANAC55(1)
>
MYB59
<---------
bZIP60(2)
--------->
ANAC55(2)
==========================
bZIP_DOF
<---------
ANAC55(2)
---
>
MYB111(1)
<---------
ANAC55(2)
--------->
GLK1(2)
--------->
ANAC46
-------
==========================
bZIP_DOF
<---------
ARR14(2)
<---------
ICU4
<---------
ALFIN1
<--------
----
ORA47(1)
<xxxxxxxxxxxxxxx
smallRNA(le3)
<---------
HSFB2a(2)
<---------
ALFIN1
<---------
ggtgaaagagtctcgagacacgtggcacaagaaccagcttggggaatctcgaaaactctcttactcatcgccattcccacacgtatgatgaatgacgtgt
1550200
<---------
ATHB12
-
ANAC55(1)
>
O2
>
ANAC55(2)
-
O2
<------
ZmHOX2a(2)
-
bZIP60(2)
------>
MYB83
>
TGA1a
----------->
RAV1(1)
-
ANAC58
------>
MYB46(1)
-
ANAC58
--------->
MYB52(1)
-
ANAC46
--------->
MYB55(1)
-
ANAC55(2)
--------->
MYB46(3)
->
STF1
<---------
MYB55(2)
-------->
P
=
bZIP_bZIP
<-----------
GT1
--------->
MYB46(3)
--------->
CBF
--------->
TOE2(3)
<---------
MYB59
<---------
At4g35610
-
-->
ALFIN1
--------->
TOE1(3)
--------->
ANAC58
*
TSS
--------->
At4g35610
<
-
TGA1a
<---------
ALFIN1
------>
MYB83
------>
MYB46(1)
------------>
CBF
--
--------------
TaNAC69(2)
----------->
TBP
--------->
ANAC58
<<<<<<<<<<<<<<<<<
LFY
-----
gccaatggatcacattacccaaaccttatataaacccaccgagagacccaacaaaactctaccagac
aaaaca
atggaagctatctctcaaacctgcaca
1550300
-------->
P
------>
MYB83
------>
MYB46(1)
--------->
MYB55(1)
<---------
ALFIN1
<
--------->
MYB46(3)
<-
--------->
AtMYB61
<-
<---------
MYB111(1)
<-
--------->
DEAR3(1)
<--
<---------
MYB55(2)
--------->
ANAC58
<--
<---------
MYB46(2)
--------->
TOE2(3)
--------->
GLK1(1)
---------->
DOF2
<--
<---------
MYB111(2)
<-----------
GT1
--------->
ANAC46
--------->
TOE2(3)
<--
=============================
HOX2a_HOX2a
--------->
ANAC58
--------->
TOE1(3)
<---
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
LBD16
--------->
At4g35610
-----
-------->
ARR11(3)
<---------
ARR14(2)
<---------
At5g28300
<---------
At4g35610
<------
---------
ARR11(3)
<---------
ARR11(3)
----------->
HVH21
--------->
ZAT2
<-------
------->
YAB1
<------
ZmHOX2a(1)
<-----------
HVH21
<---------
ZAT2
--------
----->
DOF2
<---------
At4g35610
--------->
At4g35610
---------->
DOF2
<------
ZmHOX2a(1)
aagatcatcaccaacccatctcagaggatatataaaacctcatctccagtcacggcaattccacaaacaaagctgagccttaaagtcaagaaggagaggt
1550400
<---------
ZAT2
--------->
At4g35610
<---------
At4g35610
<---------
RAP2.6(2)
<---------
At4g35610
--------->
At4g35610
<---------
MYB46(3)
--------
P
------>
NtERF2
--------
ANAC58
------>
ZmHOX2a(2)
------
GAMYB
<---------
ARR14(2)
--------
ANAC58
--------->
ARR14(2)
-------
MYB46(3)
=========================
RAV
--------->
WOX13(1)
----
MYB46(1)
<-----------
RAV1(2)
--------->
LBD16
-------
DEAR3(2)
<---------
ANAC58
--------->
RAP2.6(2)
----
MYB83
<---------
ANAC58
<---------
LBD16
<------
ZmHOX2a(1)
------
MYB46(3)
--------->
ALFIN1
<---------
At4g35610
<------
NtERF2
--
---->
ALFIN1
<---------
ANAC58
--------->
At4g35610
--------->
LBD16
<-
---
O2
<---------
ANAC58
<---------
At4g35610
<---------
LBD16
--
--
AtMYB61
<---------
ANAC46
<-----------
RAV1(1)
--------->
ANAC46
<------
ZmHOX2a(1)
<--
->
ALFIN1
<-------
TEIL
<------
ZmHOX2a(1)
<------
NtERF2
<---------
ATHB12
<------
ZmHOX2a(1)
---
gggttgctgctgctagatgcgtggcttcaggatcggattatgctgcggcaatggagccaattacgccggaggaagaggaggaattgactcagagaagagg
1550500
----------->
GT1
------>
ZmHOX2a(2)
--------->
ALFIN1
--------->
ARR14(2)
<---------
ANAC46
<---------
ANAC46
<---------
ARR14(2)
<---------
ANAC46
<---------
ANAC58
--------->
ARR11(3)
--------->
ALFIN1
<---------
ANAC58
--------->
ICU4
<-----------
RAV1(1)
<---------
ANAC58
<---------
YAB1
------>
ZmHOX2a(1)
<-----------
RAV1(1)
--------->
ARR11(3)
--------->
YAB1
<------
ZmHOX2a(2)
------->
GLK1(1)
<---------
At4g35610
<---------
LBD16
--------->
GLK1(1)
--------
GLK1(1)
--------->
GLK1(1)
<---------
YAB1
--------->
ATHB12
<-
------->
CCA1(2)
<---------
GLK1(1)
---------->
DOF2
--------->
ICU4
<---------
ARR11(3)
-------
ARR14(2)
--------->
ALFIN1
--------->
ZAT18
<---------------
AGL15
<---------
GLK1(1)
------>
ARR14(2)
<------
ZmHOX2a(1)
<---------
ANAC58
--------------->
AGL15
----------->
ARR10
gatatgtggtggagaagtaaacagaggagtatgggagctcttggagtgccttgagaaagaagctattatggggaatgatgatgggagagatcctagagat
1550600
--------->
ARR11(3)
<---------
ARR11(3)
--------->
HSFB2a(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(3)
<---------
ARR14(3)
<
--------->
ARR14(2)
<
<---------
ARR11(3)
--------->
ARR11(3)
------>
ZmHOX2a(1)
<----
<---------
GLK1(2)
<---------
ARR14(2)
<------
ZmHOX2a(2)
-----
--------->
ARR11(3)
--------->
AGP1
================
HOX2a_HOX2a
------
----------->
ARR10
<---------
ARR11(3)
--------->
ARR11(3)
------
--------
YAB1
--------->
ICU4
----------->
ARR10
<---------
GLK1(1)
--------------->
AGL15
tacaatagaagagcaaagatttttgacaagagttctaagatcttcaagaacttaaatgaacagagagatcaggctcctgttgattaccttgagaaggaag
1550700
--------->
ICU4
--------->
At4g35610
<---------
At4g35610
--------->
HSFB2a(2)
------>
NtERF2
------>
ZmHOX2a(2)
<---------
RAP2.3(3)
<------
ZmHOX2a(2)
<---------
RAP2.6(2)
--------->
ARR11(3)
--------->
YAB1
<---------
ARR11(3)
---------
YAB1
--------->
ATHB12
<---------
ARR11(3)
--------->
ARR14(2)
---------
ATHB12
<---------
YAB1
<---------
GLK1(2)
<---------
ARR14(2)
-----
At4g35610
<---------
YAB1
--------->
ARR11(3)
<---------
ARR14(3)
---->
At4g35610
<------
ZmHOX2a(1)
--------->
ICU4
--------->
ARR14(3)
--->
ANAC58
<---------
YAB1
---------->
DOF2
---------->
DOF2
--------->
AGP1
--->
ANAC58
<---------
At4g35610
--------->
ICU4
----------->
ARR10
----------->
ARR10
---------->
DOF2
ctatcatgggggctgatgatgggaaggaccctaaagattataacagaagagcaaagatttttgacaagagttctaagatcttcaagaacatcaaagaaca
1550800
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AGI:
At5g05220.1
Description:
similar to hypothetical protein [Vitis vinifera] (GB:CAN82940.1)
Range:
from: 1550268
to: 1550929
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.