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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
MYB52(2)
--------->
MYB52(1)
<-----------
TGA1
--------->
WOX13(1)
<-----------
HVH21
--------->
AHL20(2)
<-------
TEIL
<---------
AHL20(2)
-------->
GLK1(1)
------>
NtERF2
<---------
AHL20(2)
--------
ARR14(2)
----------->
RAV1(1)
--------->
AHL20(2)
------->
ARR11(3)
<---------
ETT(1)
--------->
TOE2(3)
--------
ARR11(3)
<---------
ARR14(2)
<---------
ARR11(3)
------->
ARR14(2)
--------->
ARR14(2)
--------->
AHL20(1)
----
ZmHOX2a(1)
--------->
DAG2
XXXXXXXXXXXXXXXXXXXX>
MIR829.2
-----
TOE2(3)
<----------
DOF2
--------->
TOE2(3)
<---------
RAP2.6(3)
--------->
AHL20(2)
--->
DOF2
<------------
MYB.PH3(2)
---------->
DOF2
--------->
YAB1
<---------
AHL20(1)
<--
ggatattcatcgtcactaactttcttacagataaaacttaaaaagtatttgccgacaaaaataaaacttcaaaatattaattaatcaacggattagtcca
1535800
--------->
YAB1
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
----------->
GT1
--------->
YAB1
--------->
At4g35610
--------->
WOX13(1)
------>
NtERF2
<---------
AHL20(2)
--------->
ZAT2
---------->
DOF2
---
--------->
AHL20(2)
<----------
DOF2
--------->
At4g35610
<---
-------
ATHB12
<---------
YAB1
--------->
YAB1
--------->
MYB52(1)
--------->
ZAT6
atgaataaatcaaaatatattgatagtgatgctttacttactagtatatcaaaataggctaaaaccagcgggctgaaaaaataaaggtccaactctagta
1535900
--------->
MYB52(2)
<---------
HSFB2a(2)
<---------
MYB52(1)
--------->
GLK1(2)
--------->
TOE2(3)
----------->
RAV1(1)
<----------
DOF2
--------->
ANAC55(2)
--------->
MYB52(1)
--------->
MYB55(2)
<---------
TOE2(3)
--------->
ANAC58
<-----------
RAV1(1)
<---------
TOE1(3)
--------->
ANAC58
--------->
MYB111(2)
<----------
DOF2
---------->
DOF2
----------->
GT1
<-------
GAMYB
<------
MYB46(1)
------>
YAB1
<---------
GLK1(2)
<---------
MYB46(3)
<------
MYB83
<-----------
GT1
<
------
YAB1
------->
GAMYB
--------->
MYB52(2)
----------------------->
TaNAC69(2)
--
tcatcaagcccaacagaatcgagaaaatgggtttgttggactttgcagacaaaattggtatatgttcggtttacgttatttacgagagaaaattgaatcg
1536000
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
ICU4
--------->
YAB1
<--------
ATHB1
<---------
ICU4
--------->
ATHB51
--------->
ALFIN1
<--------
HAHB4
------->
MYC3
--------->
AHL20(2)
------->
MYC2
<---------
ATHB12
<-------
MYC3
--------->
ICU4
<-------
MYC2
---------->
DOF2
<---------
ATHB51
<---------
ANAC58
<---------
At4g35610
--------->
ANAC58
--------->
ALFIN1
--------->
ZAT18
--------->
ANAC58
<---------
DEAR3(1)
<---------
ZAT18
------->
TEIL
<---------
AtMYB61
--------->
ZAT14
------>
MYB46(1)
--------->
YAB1
<---------
ANAC58
<---------
ZAT14
------>
MYB83
<---------
YAB1
<-------
TEIL
<-----------
RAV1(1)
---------
MYB59
--------->
WRKY18(1)
<---------
MYB46(3)
--------->
ZAT18
<-----------
HVH21
------->
DEAR3(2)
<----------
ID1
<-----------
RAV1(1)
--------->
ALFIN1
--------->
At4g35610
----
aaccgaacccaataattaataggtcaaactttgataactggtggtgcatgtggagatgtgtggccactagtgcagcaaagaacagactgtcagatagaca
1536100
--------->
HSFB2a(1)
<---------
DAG2
<-----------
ARR10
<----------
DOF2
--------->
ARR11(3)
<---------
ALFIN1
<---------
ARR14(2)
<----------
DOF2
--------->
ANAC58
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC58
<---------
ARR11(3)
<---------
ANAC58
<-
--------->
ZAT18
<---------
ETT(1)
---------->
ID1
<----
---------->
DOF2
--------->
ANAC46
<----------
DOF2
<---------
DAG2
------>
DOF2
---------->
DOF2
--------->
ARR14(2)
------>
ZmHOX2a(1)
<-----------
GT1
aaagaagaaaatggcaaacatttgaatcccaaagagcgccactttctcttcgctatccgacaaatcttccctcctctttgtcgtccctttaaacctttcc
1536200
--------->
ARR14(2)
------------>
CBF
<---------
ARR14(2)
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
SPL7
<----------
DOF2
==============================
<---------
At4g35610
--------->
ANAC58
------>
MYB83
<---------
DAG2
--------
DAG2
<---------
SPL7
------>
MYB46(1)
<----------
DOF2
<----------
DOF2
--
-----
ALFIN1
--------->
ZAT6
*
TSS
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<----------
DOF2
<--
accttctgcttcgtaactctcgtacc
ctagcaatcctctacttaaaccttcctttgtttctccttcacttttcctgtaaatctgctcttttgttccctcg
1536300
<---------
MYB52(1)
<------
MYB46(1)
<-------
GAMYB
<------
MYB83
<---------
LBD16
<---------
ANAC58
<---------
YAB1
------>
ZmHOX2a(1)
<---------
ANAC46
====
HOX2a_HOX2a
<---------
TOE1(2)
--------->
GLK1(1)
<---------
ANAC58
------->
YAB1
----------->
GT1
--------->
MYB59
<---------
GLK1(1)
<---------
MYB46(3)
<
----
ZmHOX2a(2)
<-----------
HVH21
<---------
AHL20(2)
--------->
YAB1
--------->
MYB52(2)
<----
atcatatcaattttcaag
gtcagtgaaatctcatgtttatttggtcctatgtgaatcagatttcagggtttgatatttgtttgttccgttgatgtgtttt
1536400
------>
ZmHOX2a(2)
--------->
At4g35610
<---------
ARR11(3)
--------->
ARR11(3)
<---------
YAB1
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR14(2)
<---------
AGP1
----------------------->
TaNAC69(2)
<---------
ARR11(3)
<---------
ANAC58
<----------
DOF2
<---------
YAB1
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR11(3)
----------->
GT1
---------
CCA1(2)
--------->
MYB52(2)
--------->
ARR11(3)
<-------
GAMYB
--------->
YAB1
-----
ANAC46
<-----------
GT1
<----------
DOF2
<---------
At5g28300
<---------
ICU4
gtagatcttatgatctgagttacttgctctgtttttctgagatttatggagggtctttgtctatgtttcttcaccgttgcaaatgagttataatttctgt
1536500
------->
GAMYB
--------->
TOE2(3)
-------->
P
---------->
DOF2
--------->
ANAC58
--------->
WOX13(1)
---------->
DOF2
--------->
ANAC55(1)
----------------->
AGL3
--------->
DAG2
<---------
bZIP60(1)
--------->
ANAC58
--------->
ARR11(3)
<
---------->
DOF2
--------->
bZIP60(1)
--------->
ANAC46
<---------
AHL20(2)
--------->
AHL20(2)
----------->
GT1
----------->
HVH21
<---------
ANAC55(2)
<---------
ARR11(3)
<
<---------
ZAT6
<---------
ZAT14
--------->
ANAC55(2)
<---------
TOE2(3)
------
----------->
GT1
--------->
ZAT14
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
ttacatgtagtgaaaaaagttcagttctgtgacataagaaagtcttaaaatttacgcaaccctagtttttttattttctaagatttcaattaaagaacat
1536600
-------->
ATHB1
--------->
ATHB12
--------->
ATHB51
<---------
ICU4
--------->
YAB1
<---------
YAB1
<-----------
GT1
<---------
AHL20(2)
<---------
YAB1
<---------
ATHB51
--------->
YAB1
--------->
ICU4
--------->
YAB1
<---------
YAB1
--------->
YAB1
<---------
CCA1(2)
<---------
ICU4
<---------
AHL20(2)
<---
---------->
ID1
<---------
YAB1
<---------
CCA1(1)
<---------
AHL20(2)
---------
ANAC58
--------->
ICU4
<---------
RVE1(1)
----------->
GT1
----
---------
ANAC58
--------->
YAB1
<----------
DOF2
--------->
ARR11(3)
<---------
ZAT6
<----
--->
TOE2(3)
<---------
YAB1
<---------
ATHB12
<---------
DAG2
<---------
ARR11(3)
<---------
YAB1
--------->
AHL20(2)
tagcttgtctcttcatgatagttttccactgattattatcacaacttttttttttgttagatatttttaatcgaaattattgtagagataaatataaata
1536700
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AGI:
At5g05180.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G10880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41532.1)
Range:
from: 1536227
to: 1538493
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.