Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->ANAC58                                                                  <-------GAMYB                                                                  <---------WOX13(2)                                                                 <---------MYB46(3)                                                                 --------->MYB52(2)                                                                 --------->MYB55(2)                                                                 --------->MYB46(2)                                  <---------------AGL15          --------->MYB111(2)                        <---------MYB52(1)                       --------->MYB111(1)                     <---------YAB5                  ----------->GT1      --------->ANAC58                    --------->GLK1(2)    <---------TOE2(3)    ------------>MYB.PH3(2)                   <---------GLK1(2) --------->TOE2(3)----------->GT1   ---------->DOF2                  --------->KAN1  --------------->AGL15  <---------AHL20(2)   agaagttgtcttcttgagagagaatcgttgagttttctacattaagaaacagagcatgttaaaatgttagttgggaaagaaacagagaagattgctctgt  1207000                     --------->YAB1                    <---------YAB1                  --------->YAB1                 <---------YAB1               <---------ICU4               <--------HAHB4               --------->YAB5               --------->YAB1              <---------YAB1              <---------YAB5                                                             --------->DOF5.7(1)            <---------ICU4                                                 <---------ANAC58           --------->ICU4                          <----------DOF2         <---------ANAC58           <---------YAB1  --------->MYB52(1)      <---------DAG2          <---------ANAC55(2)        <---------YAB1    <---------KAN1     <-------TEIL   --------->AHL12(1)         ---------->DOF2        <---------YAB5  --------->YAB1      --------->CCA1(2)             <-----------------------TaNAC69(2)  <---------RVE1(2)--------->AHL20(3)    <---------YAB5     <---------AHL12(1)     <---------KAN1   ttctgatattgtcattatcattataagaataacagaggttttaaagattcaaacttttttgaaattttagttggattacttgagaatgagaaagacccac  1207100                                                         ----------->GT1                                                        --------->DAG2                                          <---------AHL20(2)                                          --------->AHL25(1)                                          --------->AHL20(2)                                          <---------AHL20(3)                                          <---------AHL25(3)                                          <---------AHL25(1)                         --------->TOE1(3)--------->AHL20(1)                                       <-               --------->YAB5             <---------AHL25(2)                                       <-   --------->DAG2        --------->TOE2(3)--------->AHL25(2)  <-----------GT1               ---------  ---------->DOF2------->TEIL        --------->AHL20(2)---------->DOF2      --------->YAB1<---------LBD16   aagataaagcatgaaaatgaatcaaacccttaaatgaaatcaaataaaatgtaagagaaaagttatacctttgaacattaagaacaacatgttcagggaa  1207200         --------->ALFIN1       --------->ALFIN1       <---------ANAC58       <---------ANAC58       <---------ANAC46     <------MYB46(1)     <------MYB83    <---------AtMYB61   <--------P                             <-------TEIL  <-------GAMYB                          <--------P <-----------RAV1(1)                  <---------TOE2(3) --------->ALFIN1                 --------->At4g35610 --------ANAC58     --------->ATHB12  <---------TOE1(3) --------ANAC58    --------->DOF5.7(1)<---------AtMYB61 >LBD16<-----------RAV1(1)     --------->KAN1 --------->YAB5                    ----------->GT1   tgggtgttggtgtgggagagaaagattgaagatagatgctgaggttgatgatgctcttccatggtgagagagagaaaccaagaggcaaaaccagataatg  1207300                                     --------->YAB1                               ------>ZmHOX2a(1)                             =====================================HOX2a_HOX2a                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                            =============HOX2a_HOX2a                           <---------GATA12                      <---------ARR11(3)         <---------MYB46(3)<---------RVE1(2)                     --------->ARR11(3)         <------MYB46(1)   --------->ARR14(2)                   <---------CCA1(2)         <------MYB83      --------->GATA12                    <---------AHL20(2)        <---------TOE2(2)  <---------ARR14(2)        --------->ARR11(3)           --------->At4g35610       <---------MYB52(1)  ------->TEIL              <---------ARR11(3)           <---------At4g35610      <-------MYC2         --------->ARR11(2)     --------->AHL20(2)      ---------->DOF2      <-------MYC3         <---------ARR11(2)  --------->YAB5 --------->YAB1      --------->ZAT2      ------->MYC3      <---------TOE2(3)    ------>NtERF2 ------>ZmHOX2a(1)--------->DOF5.7(1)      ------->MYC2  --------->ARR11(3)     --------->MYB46(3) --------->AHL20(2) ----------->RAV1(1)    ------->TEIL   --------->YAB5 ------>ZmHOX2a(1) <---------CCA1(2)  <---------YAB1   caaatgcacgttggtttttgaagattatggatcctcctctcatgagccaccattatatctcctattatatcttatgaaaagaccagcagaattagaaact  1207400                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                      <---------AHL20(1)                                                                      --------->AHL12(3)                                                                      <---------AHL25(1)                                                                      --------->AHL25(1)                                                                      --------->AHL25(2)                                                                      <---------AHL25(2)                                                                      <---------AHL25(3)                                                                      --------->AHL25(3)                                                                      <---------AHL12(3)                                                  --------->AHL20(2)  <---------AHL20(2)                                                --------->WOX13(2)    --------->AHL20(1)                                               --------->YAB1         --------->AHL20(2)                                              <---------AHL20(2)     <---------AHL12(3)                                             --------->AHL20(2)      --------->AHL12(2)                <----------DOF2    <------------CBF                  <---------AHL25(2)            <-     ------>ZmHOX2a(1)             <---------WOX13(2)                --------->AHL25(1)            --    --------->TOE2(3)     <------------CBF  --------->AHL12(2)       --------->AHL20(2)    ------>ZmHOX2a(1)    --------->TOE1(3)<---------------ANT  <-----------TBP            --------->AHL25(3)   ----------- <---------ARR11(3)  <---------LBD16   ----------->GT1        ---------->DOF2<---------ANAC58      --   caagttccttaaatatgggtttatggggaattgtgcaaattgggttatataataaactagggccaaaagaattttatttgtgtgtttgccttcctacata  1207500                                                                                        ------>ZmHOX2a(1)                                                                                       --------->TOE2(3)                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(2)                                                                         --------->DOF5.7(1)                                                                        --------->DOF5.7(1)--------->DAG2                                                                       --------->DOF5.7(1)---------->DOF2                                             <---------WOX13(2)     ----------->HVH21  --------->TOE1(3) --------ARR11(3)                       ----------->GT1         --------->ALFIN1    <---------ARR14(2) ------->RVE1(2)                      ---------->DOF2   --------->DOF5.7(1) <-----------HVH21       - ---------->WRI1               ------------------------>ANAC81  <---------KAN1      --------->GLK1(2) ------->ARR11(3)              --------->ALFIN1       ---------->DOF2 ---------->DOF2 --------->YAB5<   gtatctctctctaatctctctagtttgtttcaagtggaagaaaagaaaattagagagaaagagagagtgtgtgaaaggggtcagagaatccttaaagtgc  1207600                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                      --------->ANAC58                                <---------YAB1                                  --------->YAB1  <----                             --------->GATA12                           <-----------GT1    <---------TGA2(2)                             <---------GATA12                    <---------ANAC58     --------->ANAC46                          ------------>CBF                       <---------ANAC58     --------->ANAC58                     <----------DOF2                          <---------ZAT14  <---------ATHB12 -----  --------->YAB1 <---------ALFIN1                             --------->ZAT14--------->WOX13(1)------ -------->WOX13(2)  <---------DAG2<---------GLK1(2)  <---------KAN1   --------->WOX13(2)  ----------- ---------WOX13(2)  <---------DOF5.7(1)   <----------DOF2   --------->WOX13(2) <---------YAB5<-------   ttaatcaaaactatttctcccacctttctccaatctgattcttacttttgtaagagtgactcagtttacttgaattacccaatcatccacgtatgacgta  1207700 ---->RVE1(2) ---->ARR11(2) -----ARR14(2) ---->ARR14(2) --ANAC58 --ANAC46                                                               <---------TOE2(3) --ANAC55(2)                                                          <---------ATHB12 ->ANAC55(2)                                                  <---------KAN1 --ANAC58                             <---------DOF5.7(1) --------->LBD16 --ANAC55(1)                         <----------DOF2     --------->ANAC46 -->STF1                            <---------DOF5.7(1)  --------->ANAC55(2) -----ARR11(2)            <---------GATA12               <---------ANAC55(2)                  <------ -->TEIL                  <---------RVE1(2)   <-----------HVH21    --------->YAB5 <---------ANAC58 --->KAN1       <---------DOF5.7(1) <---------DAG2      <---------LBD16--------->YAB1        -------- >HVH21         <---------DAG2 --------->At4g35610   <-----------HVH21<---------ATHB51    <---------YAB5 --bZIP60(2)    <----------DOF2<---------At4g35610  --------->YAB1<---------ATHB12<---------ANAC58---   tccctctctctaaaacaacttttctatggatttagcagcctttttatatgtcactgatcacgggataaatcaataatgtagtttgcgttataaacatgca  1207800                                                                     --------->ANAC58          ------                                          --------->TOE1(3)     --------->At4g35610           -------                                          --------->TOE2(3)     <---------At4g35610           ------- -TEIL                    --------->RVE1(2)          --------->KAN1  --------->ANAC58       <-------- ->AtLEC2             <-------TEIL  <---------ICU4  --------->ARR14(2)        <---------MYB52(1)    < ------>RVE1(2)      --------->AtLEC2   -------->P  <---------ARR14(2)  <---------GLK1(1)   ---------   tataaaacttagaccaaaaaaacatgcatataaaacaatacttaccttgacgaaaatactcgatgcagcgcaagaattctcttagtttttgaaagattta  1207900  Previous    Next  AGI:  At5g04310.1    Description:  pectate lyase family protein. similar to PMR6 (POWDERY MILDEW RESISTANT 6), lyase/ pectate lyase [Arabidopsis thaliana] (TAIR:AT3G54920.1); similar to pectate lyase-like protein [Brassica napus] (GB:AAQ87025.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectate lyase/Amb allergen (InterPro:IPR002022); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 1203204    to: 1207353    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.