Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------At4g35610                                                        --------->ANAC46                                                        --------->ANAC58                                                        --------->ANAC58                                                <---------YAB1                                                <---------AHL20(2)                                           <---------AHL20(2)                                           <---------AHL12(3)                                           <---------AHL25(1)            --------->AHL20(2)             --------->AHL12(3)  --------->TOE1(1)--------->YAB1          <---------AHL25(2) <---------LBD16  <---------AHL20(2)       --------->AHL20(3) <---------HSFB2a(2)  --------->YAB1       <---------AHL20(3) --------->HSFB2a(2) <---------YAB1      --------->AHL12(2) ------>GLK1(2)<---------AHL20(1)       --------->AHL12(2)                     <----------DOF2 ----->GATA12  --------->AHL20(1)      <---------AHL20(2)          <---------KAN1  <----------DOF2 ------GLK1(2)<---------AHL12(2) <---------ANAC58 --------->WOX13(2)          <---------DOF5.7(1) ------RVE1(2)--------->AHL12(2) <---------ANAC58 <---------WOX13(2)         ---------->ID1   attctcggactacattatatattatgatatatggttcttgtttattttttttaattgcaggtaactcgaatattgttttgtctttcttttagtgtattgt  198500                                                           <---------KAN1                                                          --------->GLK1(2)                                                       <---------TOE2(3)                                                 --------->AHL20(3)                                                 <---------AHL12(3)                                                 <---------AHL20(3)                                                 <---------AHL20(2)                                                 --------->AHL12(3)                                                <---------AHL12(2)                                                --------->AHL12(2)                                <--                                               <---------AHL25(1)                                 <--                              --------->ATHB12 <---------AHL20(2)                                 ---                              -------->ATHB1   --------->AHL12(3)                                 <--                              --------->ATHB51 <---------AHL12(1)                               -----                              <---------ICU4   --------->AHL12(1)                               <----                             --------->ICU4   <---------AHL20(1)                           ----------                             --------->AHL12(1)<---------AHL12(3)                          <---------ANAC55(2)                  <---------AHL20(2)          --------->AHL20(1)                          --------->RVE1(2)            --------->ANAC55(2)               --------->AHL25(3)                         <---------KAN1            <---------ANAC55(2)              <---------AHL12(3)                       <------ZmHOX2a(1)       --------->YAB5        <---------YAB5  <---------AHL20(2)                     <---------TOE2(3)    <----------DOF2          <---------ATHB51--------->AHL12(3)     <-----------GT1 --------->ANAC46   tgttttctttgattacatatttagtttttgaattattgtgtaagtatatatatttttaagaatttgttttttacatcattttttataaggaatatgtaaa  198600                                                                                           --------->AHL20(3)                                                                                           <---------AHL12(3)                                                                                           <---------AHL20(3)                                                                                           --------->AHL20(2)                                                                                  <---------AHL25(3)                                                                                 <---------AHL25(1)                                                                                 --------->AHL20(2)                                                                                 <---------AHL25(3)                                                                               <---------WOX13(2)                                                                               --------->WOX13(2)                                                                             <---------AHL25(1)                                                                             <---------AHL25(3)                                                                             --------->AHL25(2)                                                                             <---------AHL25(2)                                                                             --------->AHL25(1)                                                                             <---------AHL20(3)                                                                             --------->AHL20(1)  --------->ANAC46                                                           --------->AHL20(2)  --------->YAB1                                                             <---------AHL20(2)  --------->ANAC55(1)                                                        --------->AHL20(3)  --------->ANAC58                                                           <---------AHL12(3)  --------->ANAC58                                                          --------->AHL12(3)  --------->ANAC55(2)                                                       <---------AHL20(2) -------AHL25(3)                                         --------->RVE1(2)  --------->AHL20(2) -------AHL20(2)                                      <---------AtLEC2      --------->AHL25(3) ------ ------>AHL20(2)                                 <---------ARR14(2)         --------->AHL25(1) <----- -------AHL25(1)         <---------YAB5          --------->ARR11(2)         <---------AHL25(1) <----- ---->WOX13(2)          --------->RVE1(2)        --------->ARR14(2)       <---------WOX13(2)   <----- -----WOX13(2)      --------->YAB1               <---------ARR11(2)       --------->WOX13(2)   <----- ->GT1    <---------RVE1(2)                 <-----------HVH21      <------ZmHOX2a(1)       --------->AHL12(3)   ttaaacgtaatagataattctaacataatcaaaccttgttcatacatgtcagaactgcatgtctatataggaatacaattaaattaaaactaaaaatata  198700                                                   <---------AHL12(1)                                                   --------->AHL20(2)                                                   --------->AHL12(3)                                                   --------->AHL12(1)                                                   <---------AHL12(3)                                                   <---------AHL25(3)                                                   <---------AHL25(1)                                                   --------->AHL25(1)                                                   <---------AHL20(2)                                                  <---------AHL25(3)                                                  <---------AHL25(2)                           --------->RVE1(2)      <---------AHL20(1)                           <---------ARR11(2)     --------->AHL20(1)                           --------->ARR11(2)     <---------AHL12(1)                        <---------ANAC58          --------->AHL20(2)                        --------->ANAC55(2)       <---------AHL20(2)                        <---------ANAC58          --------->AHL25(2)                        <---------ANAC55(2)       <---------AHL25(1)                     <---------RVE1(2)            --------->AHL25(1)                   <---------YAB1                 --------->AHL20(3)               <---------AHL12(1)                 --------->AHL25(3)               --------->AHL25(2)                 --------->AHL12(1)               <---------AHL20(2)                <---------KAN1               <---------AHL25(1)   <---------RVE1(1)               <---------AHL12(2)          <----               <---------AHL25(2)   <---------CCA1(1)             --------->AHL20(2)          ------- --->AHL20(2)  <---------AHL20(3)  <---------RVE1(2)<---------AHL12(2)                        ------- ----AHL20(2)  --------->AHL25(1)  <---------ARR14(2)          --------->ATHB12               <------ ----AHL12(3)  --------->AHL12(1)  --------->ARR11(3)         <---------YAB5                <-------- ----AHL25(1) <---------KAN1 --------->YAB1   <------ZmHOX2a(1)--------->YAB5               --------- ----YAB1     --------->AHL12(1)   <---------ARR11(3)  <---------AHL20(2)           --------->KAN1   aatgccttctcatggaattttttgattcgtatcagaagatatttggcaggaatttattttcttagtgattaaaaaacaaaaaacaaatgttcgaagtatc  198800                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)         ----------->RAV1(2)                                <---------PCF2         --------->ZAT2                                     <---------ARR11(2)         <---------ZAT2                                     <---------ARR14(2)        --------->MYB52(1)                                  --------->ARR11(2)  --------->DOF5.7(1)                                       --------->ARR14(2)       <-----------GT1 -----ANAC46              <---------AHL20(2)                <---------GATA12       <---------WOX13(2) -->MYB52(1)             --------->AHL20(2)                 --------->GATA12    <---------MYB52(1) -->ARR11(2)             --------->AHL25(3)    <---------MYB52(1)            <------------AtMYB77 ---ARR11(2)    --------->ZAT18        <---------YAB5<----------DOF2       --------->MYB52(1) -HSFC1(2)      <---------ZAT18        <---------YAB1<---------ANAC58<---------ANAC55(2) >HSFC1(2)    --------->PCF2       <----------DOF2   <---------ANAC58--------->ANAC55(2)           --   ggagaaggcccaactgagcccactagtttaaattgtactttgtgattcccttgggccttgtggatcccattaagtactaactgttatttacaagaatgcc  198900                                                --------->GLK1(2)                                                <---------ARR11(3)          --------->ANAC58                  <---------AHL12(2)         --------->AHL12(3)             --------->ANAC58                 --------->AHL12(3)          <---------AHL20(3)          --------->LBD16                 --------->AHL12(2)          <---------AHL12(3)         --------->HSFB2a(2)                 <---------AHL12(3)          <---------AHL25(1)         <---------ANAC55(2)                 <---------AHL25(2)          <---------AHL12(2)         <---------HSFB2a(2)                <---------AHL20(2)           --------->AHL20(3)        <---------LBD16                --------->AHL20(2)          <---------AHL25(3)       <---------ARR14(2)             --------->YAB1                 --------->YAB1  <-----------RAV1(2)           <-----------TBP                *TSS --------->RVE1(1)     --------->ARR14(2)      --------->ANAC58        --------->WOX13(2)--------->RVE1(2)    <---------ARR11(2)  ============      --------->ANAC58        <---------WOX13(2)<---------GATA12     --------->GLK1(2)   ------>ZmHOX2a(1) --------->At4g35610       ------------>CBF--------->AHL20(2)      --------->KAN1  --------->KAN1 ------->ATHB12 --------->AHL25(3)<-----------RAV1(1) --------->KAN1<---------GLK1(2)   --------->TOE2(3)   atcatcggaggccatttataaattttggactcaattttgttgcaaataaaaatctgaaattctcaggcgagattccggaagcaaaacattcctaaatttc  199000                                            <---------MYB52(1)         ------>NtERF2                     --------->LBD16         --------->LBD16                  --------->ANAC55(2)        --------->ANAC46                  <---------ANAC58                                 --------->TOE2(3)        --------->ANAC58                  <---------ANAC58                                 --------->TOE1(3)        --------->ANAC58                  <---------ANAC46                                <---------HSFB2a(1)       ------>ZmHOX2a(2)                  <---------ANAC55(2)                             --------->HSFC1(2)     <---------ARR11(2)                <---------ARR11(2)      <---------ARR11(3)         <---------HSFC1(2)     <---------RVE1(2)                 --------->ARR11(2)      --------->ARR11(3)        ------->TEIL     --------->ARR11(2)                <---------ARR14(2)--------->ANAC46               <---------ARR14(2) --------->O2                          --------->ARR14(2)--------->ANAC58          --------->DEAR3(1) =============HOX2a_HOX2a       --------->At4g35610      --------->ANAC58      ----------->HVH21   <-   gccaagtgatccgccatgggagaagagaagtctctgcttcagttccgtagttttccttcactcaagacctctgatttcgctctcaccgaagaaccttcat  199100                                                          <---------DOF5.7(1)                                                       <---------ANAC58            --------->LBD16                               <------NtERF2           <---------ANAC58           <---------ANAC58                        --------->ARR11(2)            <------NtERF2               --------->ANAC55(2)                        --------->ARR14(2)          <---------DEAR3(1)            <---------ANAC58                    <------NtERF2    <---------ARR11(2)<---------ANAC46        --------->ARR11(2)   <                <-----------HVH21   <------ZmHOX2a(1)------>NtERF2             <---------ARR11(2)  <-              ------->MYC3    --------->LBD16    <---------DEAR3(1)           <----------DOF2 <------ZmHOX2a(1)              <-------MYC3   --------->DEAR3(1)  --------->ALFIN1       <---------ANAC58      =======             --------->O2   <---------LBD16  ---------->DOF2 <-----------GT1 <---------DOF5.7(1)   -- --------RAP2.6(2)<---------ANAC46 ----------->GT1  --------->ALFIN1    <---------ANAC58      =======   ggaggctggagaacaacgtgtcgtcgaatcgccggagaggaaacaagagaagcggtggcgtttttaccaattttgcgtccctttccgtagcgattaggag  199200                                               <---------HSFB2a(1)                                               <---------ANAC58                                               --------->HSFB2a(1)                                            <------NtERF2                                            --------->ATERF1(1)                                          --------->ALFIN1                                          <---------DEAR3(1)                                         --------->ATERF1(1)                                         <------NtERF2                                        <---------ATERF1(1)                                       --------->ALFIN1                                       <---------DEAR3(1)                                      --------->ATERF1(1)                                      <------NtERF2                                    <---------ANAC46                                    <---------DEAR3(1)                                    --------->ALFIN1                                   <---------ABI4(1)                                   <------NtERF2                                   <---------LBD16                                   --------->ATERF1(1)                                   --------->At4g35610                                  <---------RRTF1(1)                                  <---------ATERF1(1)                                  <---------ERF1<---------SPL7(1)                                  ------>NtERF2<---------ANAC58          <---------KAN1          <---------RAP2.6(1)         <---------GATA12         <---------RAP2.3(1)         <-----------ARR10       <---------DEAR3(1)         --------->GLK1(2)       <---------ATERF1(2)                       --------->LBD16          -         <---------ARR14(2)      --------->ATERF1(2)                   <---------ARR11(2)           -         --------->ARR14(2)      <---------RAP2.6(2)                 --------->KAN1                <-         --------->GATA12        <---------ANAC46                 <---------MYB46(3)              <--         --------->RVE1(2)       <---------RRTF1(3)              --------->ALFIN1                 ---        <---------GLK1(2)        <---------RAP2.3(3)             <---------DEAR3(1)              <--- ------>ZmHOX2a(2)               <---------DREB2C(2)             <---------AtMYB61              ----- ------ZmHOX2a(2)                <---------RRTF1(2)             <---------------------WRI1--------->ARR11(2) --------GATA12                  <---------RAP2.3(2)       <---------ARR14(2)             --------->ARR14(2) =======HOX2a_HOX2a   ------->GAMYB<---------At4g35610     --------->ARR11(2)            --------->KAN1 ------->GATA12    --------->MYB52(1)<---------ATERF1(1)   --------->ARR14(2)        <------ZmHOX2a(1) ======HOX2a_HOX2a <-----------GT1<---------ORA47(2)       <---------ARR11(2)    --------->DOF5.7(1)-   agatcggagagaatctacatttaacggtcgtaatggcggcggaggcggagcgttcgcatcggtttcggtggtgattccgaaggaagaggatgaattcgcg  199300                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------NtERF2                                                                                             <-------                                                                                             ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->ATERF1(1)                                                                                           <---------ABI4(2)                                                                                           <------NtERF2                                                                                           --------->RRTF1(1)                                                                                           --------->DEAR3(2)                                                                                           --------->DEAR4(2)                                                                                           --------->MYB46(3)                                                                                           --------->ORA47(2)                                                                                           --------->RAP2.3(1)                                                                                           --------->ERF1                                                                                           --------->RAP2.6(1)                                                                                          <---------At4g35610                                                                                          <---------ATERF1(1)                                                                                          <---------RAP2.3(1)                                                                                          ------>NtERF2                                                            <------NtERF2                 --------->ABI4(2)                                                            <---------ZAT18               --------->At4g35610                                                            --------->ZAT14              <---------ARR11(2)                                                            --------->LBD16              <---------ARR14(2)                                                            ------>NtERF2                --------->ARR11(2)                                                           --------->RAP2.3(2)          --------->ATERF1(1)                                                           --------->DEAR3(1)          <---------ATERF1(1)                                                           --------->RAP2.6(2)         --------->LBD16           --------->ZAT2                                 <------NtERF2               --------->DEAR3(1)           --------->At4g35610                            --------->ATERF1(1)        <---------LBD16      ------>NtERF2                                       --------->RAP2.3(1)     --------->SPL7(1)    --------->TOE1(1)                                    ------>NtERF2          <---------SPL7(1) ----->MYB46(1)                                          <---------RAP2.3(1)   <---------ANAC58------ ------->P <---------ZAT2                                <---------ATERF1(1)   <---------HSFB2a(1) --------ALFIN1                                         --------->ANAC58       <---------ANAC58------ -------MYB46(2)                        --------->ETT(2)--------->ANAC46       --------->HSFB2a(1)--- ------>DEAR3(1)                        <---------ETT(2)--------->ANAC58    <------NtERF2--------->ARR14(2) ---NtERF2 <---------At4g35610  <----------DOF2         <---------DEAR3(1) --------->LBD16--------->ZAT2 ->NtERF2<-----------RAV1(2)   <---------ANAC58      --------->DOF5.7(1)  --------->DEAR3(1)<-------- ----->MYB83 <---------MYB46(3)<---------ANAC58    ---------->DOF2       <---------LBD16<------NtERF2   cctacctcggcccagctgttgaaaaaccccattgctttactgtcgatagtaccgaaagacgccgcactattcttcgccggagcgttcgccggagccgccg  199400  Previous    Next  AGI:  At5g01490.1    Description:  CAX4 (cation exchanger 4); cation:cation antiporter. Identical to Vacuolar cation/proton exchanger 4 (CAX4) [Arabidopsis Thaliana] (GB:Q945S5;GB:Q9M025); similar to CAX3 (cation exchanger 3), cation:cation antiporter [Arabidopsis thaliana] (TAIR:AT3G51860.1); similar to CAX [Suaeda maritima subsp. salsa] (GB:AAR99078.1); contains InterPro domain Calcium/proton exchanger superfamily (InterPro:IPR004798); contains InterPro domain Calcium/proton exchanger; (InterPro:IPR004713); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) Range:  from: 195540    to: 198523    Orientation: Forward Links:  TAIR  MIPS  AIP    AGI:  At5g01500.1    Description:  mitochondrial substrate carrier family protein. Identical to Thylakoid ADP,ATP carrier protein, chloroplast precursor (TAAC) [Arabidopsis Thaliana] (GB:Q9M024;GB:Q8LCT8); similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G51870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15815.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 198942    to: 201551    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.