Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
       ----------->GT1
      <---------TOE2(3)
    ---------->DOF2                                                                ---------->DOF2
----------GT1                                                                ----------->GT1
----->HSFC1(2)                                     <---------DEAR3(1)       --------->LBD16
----->HSFB2a(1)                                  ------>NtERF2             <---------ANAC46
------HSFC1(2)                                  --------->DEAR3(1)        --------->ATERF1(1)
------HSFB2a(1) <----------DOF2                 ----------->HVH21         <------NtERF2
-----KAN4(2)    --------->TOE1(3)              --------->DEAR3(2)       <---------DEAR3(1) =========
-------ARR10    --------->TOE2(3)     ------->TEIL<------NtERF2<---------YAB1<------NtERF2 <------ZmHOX2a(1)
 
ttttccctaaaggtttaaactttaacaattgaattttgacggacctcgttgccgacggtgatgagcatgattttggaggcgggataaaaaggaaggacat  16483600
                                                                               ------>MYB83
                                                                  --------->At4g35610
                                  <------NtERF2                   <---------At4g35610
                             ------>ZmHOX2a(2)                 ------>NtERF2   ------>MYB46(1)
                           <---------ARR14(2)                 --------->DEAR3(1)
                      <---------MYB52(1)                     <---------ABI4(2) -------->P
                    <---------ANAC46                         --------->At4g35610  ----------->RAV1(2)
                   <------NtERF2 --------->ANAC58         <---------At4g35610--------->MYB46(3)
                  <---------RAP2.3(1)                     --------->At4g35610<---------MYB46(2)
                 <---------RAP2.6(2)                   <---------MYB52(1)<---------ARR14(2)------>NtERF2
                 <---------DEAR3(1)                    --------->DOF5.7(2)  --------->DEAR3(2)------
                --------->At4g35610                   <-------GAMYB    <---------YAB1     --------->LBD16
               --------->MYB52(1)--------->ANAC58   <------NtERF2--------->DEAR3(1)       ------>NtERF2
      ------>ZmHOX2a(2)    --------->ARR14(2)      ------>NtERF2<------NtERF2--------->DEAR3(1)    <
      ===========================HOX2a_HOX2a      <---------DEAR3(1)----------->TGA1     <---------RAP2.6(2)
=============HOX2a_HOX2a  <------ZmHOX2a(1)       --------->DEAR3(1)----------->HVH21   <---------LBD16
 
tggagttgatccattgagtagcggcgttaggatcggaggcaagagaaggaacgtcgccgttagcagcgccgatgacgataccgacccctgttccggccaa  16483700
                       --------->At5g28300
                      --------->RAP2.3(3)
                      --------->RAP2.3(2)
                      <---------ANAC46
                     --------->RRTF1(1)
                     --------->RAP2.3(1)
                     <------NtERF2
                    <---------RAP2.3(1)
                    <---------ATERF1(1)
                    ------>NtERF2
                   --------->DEAR3(1)
                  --------->RAP2.3(1)
                 <---------ATERF1(1)
                 <---------RAP2.3(1)                                                             ---
                <---------DEAR3(1)                                                              <---
              --------->ARR14(2)                                                               <----
            <------NtERF2---------->DOF2                                                       <----
           --------->LBD16         <----------DOF2               --------->MYB52(1)           <-----
          <---------ANAC46        <---------HSFB2a(1)            ------------>AtMYB77         ------
          <---------ANAC58        <---------HSFC1(2)             <---------WRKY18(1)          <-----
          <---------ANAC58--------->DAG2                        ----------->HVH21             <-----
     <---------ICU4<---------DEAR3(1)                          <----------DOF2                <-----
    <---------YAB1--------->ATERF1(1)                         <---------ANAC58    <------NtERF2<----
  --------->YAB1------>ZmHOX2a(2) --------->HSFC1(2)          <---------ANAC58  <---------DEAR3(1)--
---->DOF2<---------LBD16<---------MYB52(1)          <---------ANAC46            --------->ALFIN1----
----------DOF2<---------ARR14(2)  --------->HSFB2a(1)      <------ZmHOX2a(1)   <---------LBD16<-----
 
agctttgatgatggcgggatcggcgccgtaaagtcgaactttctgaattgaagtggattggaggagcttgacggtttctgaaggcggagggagattgtcg  16483800
<---------O2
<---------bZIP60(2)
--------->O2
------>DEAR3(1)
---NtERF2
-----ATERF1(1)
-----ERF1
----DEAR4(1)                              --------->At5g28300
--->ETT(1)                               <---------DEAR3(2)
----At1g77200                            ----------->GT1                     <---------At4g35610
----RAP2.3(3)                           --------->ETT(1)                ----------->GT1
----DREB2C(2)                        <-----------RAV1(1)               <---------TOE2(3)         <--
-----RAP2.3(1)                     --------->At4g35610            <------ZmHOX2a(1)              ---
---->NtERF2                        <---------At4g35610    <------ZmHOX2a(1)  --------->At4g35610 <--
----->ATERF1(1)                   ------->TEIL     --------->MYB52(1)  --------->DAG2            ---
----DEAR3(1)       --------->At4g35610  <---------At1g77200     ----------->GT1      ---------->DOF2
 
gcgacttggccgtagttaactccgatgaaaggctctgcatctgtcggtaacaaaaaacagaggaagagaggaaaaaggttagatgaagaaaagaagaacg  16483900
                          <---------ANAC58
                          <---------TGA1a
                          <---------ANAC55(1)
                          <---------ANAC46
                          <---------ANAC55(2)
                          --------->O2
                          <---------O2
                          <---------ANAC58
                          --------->ANAC55(2)
                         <<<<<<<<<NAP
                   <---------ARR11(3)
                   --------->ARR14(2)                        <------ZmHOX2a(1)
-------bZIP60(1)   --------->ARR11(3)                     <------ZmHOX2a(1)
------>bZIP60(1)   <---------ARR14(2)               <---------At4g35610
-------O2 <---------ARR14(2)    <------ZmHOX2a(1)   --------->At4g35610                           *TSS
------>O2<------ZmHOX2a(1)--------->TGA1a        <------ZmHOX2a(1)                       --------->YAB1
 
acgtcgtagtgaggaactagaagatacttacgtgaggatgggaagtgagagaggaagatgaggaggaaatagatggagatggagagagccattgatggtg  16484000
                                                                                           ---------
                                                                                           <--------
                                                                                           ---------
                                                                                           ---------
                                                                                           ---------
                                                                                           <--------
                          <---------MYB46(3)                        --------->At5g28300    ---------
                          <---------REM1(1)---------->DOF2         ----------->GT1         <--------
                       <---------MYB46(3)<---------------AGL15    ==================================
                    <-----------RAV1(1) --------->ANAC55(2)       <------------MYB.PH3(1)  ---------
                <------------CBF        <---------ANAC55(2)     --------->MYB52(1)         ---------
              <------ZmHOX2a(1)    <---------MYB46(3)        <---------ZAT6         ---------->DOF2
            <---------TOE2(3)    <-------GAMYB             <---------At5g28300      ================
         --------->CCA1(2)<-----------RAV1(1)             <-----------GT1           ================
 
agagagagagagatttaggaattgtgttgttgttgctgttgttacttaaagaagaggttttttactgtaacggttatatacaaactccaaagacacgtct  16484100
                        --------->WRKY38(1)
                     --------->ALFIN1
                    ------->MYC4
                    <-------MYC3
                    ------->MYC3
                    <-------MYC2
                    <-------MYC4
<---------ANAC58    ------->MYC2
<---------ANAC58   <---------TGA1a
>ANAC58            --------->ANAC55(2)
-ANAC55(2)         <---------ANAC55(2)
>ANAC55(2)         --------->TGA1a
>ANAC58            <---------O2
>ANAC55(1)         --------->O2
-O2             <---------ZAT14
>O2             <---------REM1(2)                                                                <--
-TGA1a          --------->ZAT14                                                         <----------DOF2
=MYC_MYB      --------->ANAC46                                                    <---------AHL20(2)
>bZIP60(2)  --------->ANAC46                                                     --------->AHL20(2)
>TGA1a <-----------GT1--------->REM1(2)                                          <---------AHL20(2)
=bZIP_DOF   --------->ZAT6                     <---------At4g35610         ----------->GT1 <--------
=============================bZIP_DOF          --------->At4g35610  <----------DOF2  <-----------GT1
 
tgtgcttgtttttccacactacacgtgttgacttctgttcacaagtcttgagcttaagtcttcgtttcggtctttattttgtaattttatacttttgatt  16484200
                                                 <----------DOF2
                                              <---------ARR11(3)
                                              --------->ARR11(3)
                                             <---------GLK1(1)
                                    --------->HSFB2a(2)
                                    <---------HSFB2a(2)
                                   <---------LBD16
      <---------At4g35610     <---------------AGL15
  <-----------HVH21          <-----------------AGL2       --------->GLK1(2)
  <-----------TGA1      --------->DAG2       --------->GLK1(1)                             <--------
---------GT1           ---------->DOF2     <------ZmHOX2a(1)   ---------->DOF2            <---------ANAC58
-YAB1 <-----------------AGL1 <-----------------AGL3   <------ZmHOX2a(1)                   <---------ANAC58
 
tttctcgtcatctaatttggaaactgaaaagtgctatttctggagaggaaatctttaggagaatcgaaaagagagcatttgttttttgagtttgcttttg  16484300
                     <---------YAB1
                   --------->ATHB12                                 --------->MYB52(2)
                  <---------YAB1                         <-----------GT1
                  --------->ICU4                         --------->ANAC46   --------->AtLEC2
--DOF2          <------ZmHOX2a(1)                ----------->GT1<---------MYB46(3)
 
aagcatgaggtattccataggatgattagtatcgcaaaacacatatttcagtgtgtaaatacaccatttgttcgtttccatgctatttctcagtagtcca  16484400
                                   --------->AHL20(2)
                                   <--------ATHB1
                                   <---------ICU4
                                   --------->ATHB51
                                   --------->YAB1                               <---------YAB1
                                   <---------AHL20(1)                        <---------YAB1
                                  <---------ATHB51                         <---------ICU4
                                  --------->ICU4                           --------->ATHB51
                                  <---------ATHB12                         <--------HAHB4
                            --------->AtMYB61                              --------->YAB1
                            ------->GAMYB      --------->ANAC55(2)         -------->ATHB1
                           --------->MYB46(3)  <---------ANAC58           --------->ICU4       -----
                        --------->MYB46(3)     <---------ANAC46           <---------ATHB51     <----
                      --------->ANAC46      <----------DOF2               <---------YAB1       -----
                     --------->MYB46(3) <-----------GT1             ------->GAMYB          <--------
           ---------->DOF2 <---------MYB55(2)  <---------ANAC58   --------->ANAC46 --------->WRKY38(1)
 
agttaaacattcttcaaagtttcacccacaaccaccaataattttagctttcgtgattccacaatgtacaactcacaattattatgttgactgtggtcac  16484500
<- Previous    Next ->

AGI:  At4g34480.1   
Description:  glycosyl hydrolase family 17 protein. Identical to Putative glucan endo-1,3-beta-glucosidase 7 precursor [Arabidopsis Thaliana] (GB:Q9M069;GB:O65675;GB:P80829); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT2G16230.1); similar to unknown [Populus trichocarpa] (GB:ABK95331.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781)
Range:  from: 16481884    to: 16483999    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.