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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
<---------
YAB1
<---------
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<---------
DAG2
<---------
TOE2(3)
<--------
HAHB4
--------->
TOE2(3)
<---------
AHL20(2)
-
<---------
ICU4
--------->
ARR11(3)
--------->
YAB1
-----
--------->
ATHB51
--------->
AHL20(1)
<---------
YAB1
<----
---------->
DOF2
-------->
ATHB1
<---------
ARR11(3)
<---------
YAB1
<---------
AHL20(2)
--------->
TOE2(3)
--------->
ICU4
<---------
AHL20(1)
--------->
TOE2(3)
--------->
AHL20(2)
------->
bZIP60(1)
<---------
YAB1
<---------
ZAT6
<----------
DOF2
--------->
AHL20(2)
------
--------
bZIP60(1)
<---------
ATHB51
<---------
YAB1
<-----------
GT1
--------->
ICU4
--------->
YAB1
-
gtcatcacattaaagtcaaaaacaattattatttttaaagaatattagtgatatattttacctttatgaaacattattaatatttaaacataaaaaatta
16378600
<---------
ANAC46
<-
----------->
HVH21
<----
<---------
YAB1
-----
--------->
YAB1
<--------
--------->
ARR11(3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
---------
<---------
ARR11(3)
--------->
ATHB12
<---------
ANAC46
--------->
AHL20(2)
-------->
CCA1(1)
--------->
MYB52(1)
<---------
HSFB2a(2)
<---------
AHL20(2)
---->
AHL20(2)
<---------
ARR14(2)
<-------
TEIL
----------->
GT1
<---------
AHL20(1)
-----
AHL20(2)
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
WOX13(1)
--------->
AHL20(1)
--->
AHL20(2)
---------->
DOF2
<---------
WOX13(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
-----
-------->
RVE1(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
--------->
HSFB2a(2)
----------->
GT1
<----
aaatatcatgagacgggaagtatagcagaacgggtttggattgataggaaatacatcgagacgggtttggattgatataacacaggtaaaatatttattt
16378700
<
-
---
<----
-------
<-------
<---------
YAB1
<---------
ICU4
-------->
ATHB1
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
YAB1
<-----------
GT1
--------->
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
-
--------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
-----
-----
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
-----
---->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
-
AHL20(2)
--------->
ZAT6
--------->
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
---------
>
AHL20(2)
<---------
YAB1
<-----------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(1)
---->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<-----------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
-----
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
DAG2
--------->
AHL20(2)
<---------
YAB1
tattattttatcatcactaatttttttaattacaagattaatataaaattatataactttattactaaatataaaattataaaatttaaaattattatat
16378800
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
<<<<<<<<
CAMTA3
<---------
AHL20(2)
<-------
MYC3
--------->
AHL20(1)
------->
MYC3
---------
AHL20(2)
--------->
ANAC58
------>
MYB83
---------->
TBP
--------->
ANAC58
------>
MYB46(1)
-------->
TBP
--------->
ANAC46
<-----------
RAV1(1)
--------->
STY1(2)
-----
AHL20(2)
<---------
ALFIN1
--------->
ARR11(3)
<---------
STY1(2)
--------->
ANAC58
---->
TBP
--------->
ZAT14
--------->
YAB1
--------->
DEAR3(2)
--------->
ANAC58
--
AHL20(2)
<---------
ZAT14
<---------
YAB1
<-----------
GT1
<------------
-------->
AHL20(2)
<---------
ZAT18
<---------
AHL20(2)
--------->
MYB46(3)
---------->
DOF2
------>
TBP
--------->
ZAT18
--------->
AHL20(2)
--------->
DEAR3(1)
----------->
TBP
---->
AHL20(2)
<---------
ZAT6
--------->
AHL20(1)
--------->
DREB2C(2)
<---------
YAB1
>
AHL20(2)
<---------
MYB52(1)
--------->
YAB1
<-----------
HVH21
--------->
AHL20(2)
atataaataaaatatttgtccgtagtgtaccacgcgttgaattataatatgttgttgtcaccgactctagctagggcttataaatacaaagacgcatagg
16378900
-
--
------------>
CBF
<---------
ANAC58
--
--------->
TOE2(3)
--------->
YAB1
--
<---------
DAG2
--------->
ARR11(3)
---------
--------->
TOE1(3)
<---------
ARR11(3)
--------->
At5g28300
---------
<-----------
GT1
--------->
ZAT6
--------->
TOE2(3)
--------->
ARR14(2)
---------
-----------
TaNAC69(2)
<---------
ZAT18
<---------
CCA1(2)
<---------
ANAC58
------>
ZmHOX2a(1)
gtttcacaacttcatcaccttaacacaatttgttcgctctctaaattcttaaatctttcatcaaatttgcttcacagtgaaaaacctcctccacaaggaa
16379000
<---------
ARR11(3)
----------->
CBF
<-----------
HVH21
------->
ANAC46
<---------
At4g35610
-----
------->
ANAC58
--------->
At4g35610
<----
------->
ANAC58
--------->
ZAT2
<---------
ANAC46
<------
>
ANAC58
------>
ZmHOX2a(2)
<---------
MYB46(3)
--------->
AtMYB61
>
ANAC46
--------->
ARR11(3)
<---------
MYB52(1)
--------->
ALFIN1
--------->
DEAR3(1)
>
ANAC58
<---------
YAB1
<---------
GLK1(1)
<---------
TOE2(3)
--------->
WOX13(1)
<---------
ANAC46
cacaca
atgtcttcgaagatgatcgtgttgatgagctccgatggtcagtcgtttgaggtggaagaagcggtagcaatccaatcgcagaccatagcgcata
16379100
-------
<------
<--------
--------->
bZIP60(2)
<---------
TGA1a
--------->
O2
=======================================
bZIP_DOF
<---------
ANAC46
<---------
ANAC58
<---------
O2
<---------
At4g35610
<---------
ANAC58
--------->
TGA1a
<-------
GAMYB
--------->
GLK1(2)
--------->
ANAC46
<---------
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
YAB1
--------->
ANAC58
--------->
ANAC46
-->
MYC3
<---------
ANAC58
------->
MYC3
<---------
GLK1(2)
------>
ZmHOX2a(2)
<---------
ALFIN1
---
MYC3
--------->
ATHB12
<---------
GLK1(1)
---------->
DOF2
---------->
DOF2
--------->
ANAC58
<---
---
ARR14(2)
<---------
ANAC46
<-------
MYC3
<---------
ARR11(3)
<---------------
AtSPL3
<------
tggttgaagacgattgcgttgctgatggaatccctcttgcaaacgtggaaagcaagattcttgtgaaagtgatcgagtactgcaagaaacaccacgtcga
16379200
------>
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
AGP1
<---------
KAN4(1)
--------->
ARR14(2)
--------->
HSFB2a(1)
--------->
GLK1(2)
--------->
HSFB2a(2)
<---------
ARR14(2)
<---------
HSFB2a(2)
<-----------
ARR10
------>
ZmHOX2a(2)
<---------
CCA1(2)
----------->
RAV1(2)
--------->
ARR14(2)
======================
HOX2a_HOX2a
<---------
AGP1
-->
DEAR3(1)
--------->
ARR11(3)
<---------
ARR14(2)
-
---
DEAR3(1)
<---------
ARR11(3)
------->
TEIL
<---------
ALFIN1
--------->
ZAT2
---
HVH21
------>
ZmHOX2a(1)
--------->
MYB46(3)
<---------
ARR11(3)
<---------
ZAT2
------
O2
=======================
HOX2a_HOX2a
--------->
ARR11(3)
<---------
ICU4
-
---
ETT(2)
<------
ZmHOX2a(1)
<-------
TEIL
--------->
MYB46(3)
<---------
YAB1
<---
cgaggctaatcctatctctgaagaggatctcaacaactgggacgagaagttcatggatctcgaacaatccaccatctttgaactcatccttgctgcgaat
16379300
--------->
GLK1(2)
--------->
ARR14(1)
--------->
ANAC58
--------->
ARR14(2)
<-------
MYC3
<---------
YAB1
<---------
ARR14(2)
------>
ZmHOX2a(2)
------>
NtERF2
<---------
GLK1(2)
<---------
WOX13(1)
--------->
LBD16
<---------
GLK1(1)
<---------
ANAC46
<---------
ANAC58
<---------
HSFB2a(1)
<---------
ANAC58
--------->
ANAC46
--------->
ICU4
----------->
ARR10
---------->
DOF2
------->
MYC3
<---------
ANAC46
--------->
LBD16
--------->
TOE2(3)
<---------
At4g35610
<---------
ANAC58
<-----------
RAV1(2)
----------->
RAV1(1)
<---------
ARR11(3)
<---------
LBD16
--------->
ANAC58
-------->
TOE1(3)
<---------
ANAC58
<-----------
RAV1(1)
--------->
ANAC58
<-------
TEIL
-------->
TOE2(3)
<---------
ANAC58
--------->
MYB52(1)
---------->
DOF2
<------
ZmHOX2a(1)
<---
--------
GT1
<---------
ANAC58
--------->
ANAC58
<---------
ARR14(2)
<---------
ZAT14
-----
tacctcaacataaaaagcttgcttgatctcacatgccaaactgttgcggacatgatcaaaggcaagactccagaggagattcgttcaactttcaacattg
16379400
<--------
----------->
RAV1(2)
<---------
<-----------
GT1
--------->
TOE2(3)
<--
--------->
ATHB12
--------->
GLK1(2)
--------->
ATHB12
--------->
TOE1(3)
-----
--------->
ICU4
>>>>>>>>>
TBF1
--------->
GLK1(2)
--------->
YAB1
<----------
DOF2
------
TOE2(3)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
<---------
YAB1
------->
TEIL
--------->
STY1(2)
---->
YAB1
<---------
At4g35610
----------->
GT1
<----------
DOF2
<---------
ATHB12
<------------
MYB.PH3(2)
agaatgattttacacctgaggaagaagaagctgttcgtaaggagaatcaatgggcttttgaatga
gcccatgaatcaaaaccctaactagctttcttttt
16379500
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AGI:
At4g34210.1
Description:
ASK11 (ARABIDOPSIS SKP1-LIKE 11); ubiquitin-protein ligase. similar to ASK12 (ARABIDOPSIS SKP1-LIKE 12), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G34470.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85607.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072)
Range:
from: 16379007
to: 16379465
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.