Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ICU4
<---------
YAB1
<---------
MYB46(3)
----------->
GT1
--------->
YAB1
----------->
GT1
------>
AHL20(2)
<----------
DOF2
<---------
ARR11(3)
<---
-------
AHL20(2)
<---------
ANAC58
<---------
GLK1(2)
<-----
----
DOF2
<---------
ANAC58
--------->
ARR14(2)
-------
---
DAG2
<---------
YAB1
<---------
ARR14(2)
--------->
ANAC46
--
GT1
--------->
ANAC46
<---------
YAB1
<---------
YAB1
<------
ZmHOX2a(1)
<---------
GLK1(1)
ttaaatcgataaacacaacaagttttcttcttgctctaattgtgcttgtatgattatggaacag
gatactctcggtggataaatcgatttcccaccatta
15500700
--------->
ZAT18
<-----------
RAV1(2)
------
YAB1
<---------
ZAT18
<------
MYB83
----------->
GT1
----
ICU4
<---------
MYB52(1)
<------
MYB46(1)
<---------
LBD16
----------->
GT1
<-
-->
ICU4
<-------
GAMYB
--------->
MYB59
<---------
ANAC46
---------->
DOF2
------
tgaaacatcccgttgtgcaatag
aaactattagatttggtctcaggctgtttcgagggagagaaatagtcaaaaaaggaaattttgttcagtttattagc
15500800
--------->
ARR14(1)
--------->
CCA1(2)
--------->
ARR14(2)
<---------
ALFIN1
--------->
ANAC46
<-------
TEIL
--------->
MYB46(3)
<---------
CCA1(1)
--------->
AHL20(2)
<---------
ANAC58
<---------
ARR14(2)
------->
MYC3
<---------
ANAC58
----------->
ARR10
<-------
MYC3
<---------
YAB1
--------->
CCA1(2)
<---------
RVE1(1)
--------->
ANAC46
<---------
YAB1
--------->
YAB1
--------->
ANAC58
<---------
ARR11(3)
--------
ALFIN1
<---------
AHL20(2)
<---------
YAB1
--------->
ANAC58
--------->
ARR11(3)
--->
At4g35610
--------->
YAB1
--------->
YAB1
------>
NtERF2
--------->
ARR11(1)
tccacgttgttgtattatatacacttgagattataattcatggtttctctatt
tatgatgcttccccaccaagaaatgagatacgatatatagatattta
15500900
<---------
ANAC46
<------
NtERF2
<---------
ARR14(2)
------>
NtERF2
--------->
ARR14(2)
--------->
ANAC46
<---------
TOE2(3)
<---------
DEAR3(1)
--------->
DAG2
--------->
ARR11(3)
<---------
TOE1(3)
<---------
ARR11(1)
--------->
CCA1(2)
<------
ZmHOX2a(1)
--------->
DEAR3(1)
----------->
GT1
---------->
DOF2
<---------
TOE2(3)
--------->
ANAC46
<---------
ANAC58
<---------
ARR14(2)
<---------
YAB1
<-----------
GT1
--
<---------
ANAC58
--------->
GLK1(2)
<---------
YAB1
<---------
CCA1(2)
<-----------
GT1
tgcaagtctaaaatttgacttgttatatagaggcaaatctaaaagataaggttccgattatgaaggattcaaatctttaaacgacgccgtgtttccatat
15501000
<------
MYB46(1)
<------
MYB83
----------->
GT1
<--------
P
<---------
ANAC58
<-------
GAMYB
<-------
GAMYB
<------
MYB46(1)
--------->
MYB52(2)
<------
MYB83
<---------
MYB46(3)
<---------
DEAR3(2)
--------->
MYB111(1)
--------->
MYB55(2)
<--------
P
--------->
MYB52(2)
<---------
HSFB2a(1)
<---------
MYB46(3)
----------->
GT1
<---------
AtMYB61
<------
MYB46(1)
<---------
TOE1(2)
--------->
TOE1(3)
<---------
TOE2(2)
--------->
AHL20(2)
<------
MYB83
--------->
TOE1(2)
--------->
MYB46(3)
<---------
ANAC46
--------->
AHL20(2)
<------
ZmHOX2a(1)
--------->
TOE2(2)
<---------
MYB52(2)
<---------
ANAC58
----------->
TBP
<---------
TOE2(3)
--------->
ARR14(2)
<---------
ZAT14
<---------
MYB52(1)
<---------
YAB1
<---------
TOE1(3)
<---------
ARR14(2)
--------->
ZAT14
<-------
GAMYB
------>
ZmHOX2a(1)
<----------
DOF2
--------->
GLK1(2)
------->
ZAT6
<----------
DOF2
------>
ZmHOX2a(1)
--------->
TOE2(3)
*
TSS
<---------
GLK1(2)
aacagtaaacagaaacaaacgcgtttttcgttggttggataaatcctccttataaataaacaaacctttaaggaaggttagtt
gtcaaaagaatctgcga
15501100
---------
<---------
ICU4
--------->
HSFB2a(1)
<---------
ATHB12
<------
ZmHOX2a(2)
===========
-------->
ZAP1
<---------
WRKY18(1)
--------->
WRKY38(1)
--------->
WRKY12
----------->
HVH21
--------->
WRKY45
------>
NtERF2
<---------
MYB52(1)
--------->
ANAC46
<---------
At4g35610
--------->
ANAC58
<-------
GAMYB
--------->
ANAC58
--------->
At4g35610
<---------
ICU4
--------->
MYB52(2)
--------->
YAB1
--------->
ZAT14
<---------
MYB46(3)
<------
ZmHOX2a(2)
<---------
CCA1(2)
--------->
SPL7
<---------
ARR11(3)
<----------
DOF2
<---------
MYB52(1)
--------->
ARR11(3)
<---------
DAG2
<------
ZmHOX2a(2)
<-----------
HVH21
<------
ZmHOX2a(1)
<------
NtERF2
<---------
ZAT14
<---------
SPL7
<---------
KAN4(1)
aaaataagagagagagagagagaaacaggatcattcatt
atgcccgccttatctcactacagatcagtatcatctctaccgtccgttgaccgatcattcc
15501200
<-------
TEIL
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
AGP1
<---------
ZAT2
--------->
GLK1(1)
--------->
At4g35610
<---------
GLK1(1)
--------->
ANAC58
--------->
At4g35610
--------->
ANAC58
<---------
At4g35610
--------->
bZIP60(2)
----------->
ARR10
<---------
LBD16
<------
NtERF2
--------
<---------
ALFIN1
------>
NtERF2
<-------
------>
ZmHOX2a(2)
==================================
HOX2a_HOX2a
<------
ZmHOX2a(2)
===================================
HOX2a_HOX2a
<---------
ARR11(3)
------>
ZmHOX2a(1)
--------->
DEAR3(1)
--------->
ARR14(2)
------->
TEIL
--------->
RAP2.3(1)
------
<---------
ARR14(2)
<---------
ARR14(2)
------>
NtERF2
<-------
<------
ZmHOX2a(1)
<-----------
ARR10
--------->
LBD16
<---------
--------->
MYB46(3)
<---------
At4g35610
--------->
ARR14(2)
<---------
ATERF1(1)
--------
--------->
MYB52(1)
<------
NtERF2
<---------
GLK1(2)
<---------
DEAR3(1)
<---------
--------->
MYB46(3)
--------->
ANAC46
<---------
CCA1(2)
--------->
ANAC46
<----------
>
KAN4(2)
<-----------
RAV1(2)
--------->
LBD16
<---------
LBD16
<---------
ANAC46
======================
HOX2a_HOX2a
----------->
RAV1(2)
<---------
ANAC46
<---------
ANAC46
---------
ttctcatccaacgactcaggatccacggcagctcttcttccttccctgaatcttctccttctgcgtctattctctccggcgcagatccgttgaagtgtac
15501300
<---------
DAG2
<----------
DOF2
--------->
LBD16
------>
NtERF2
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
--------->
GLK1(1)
=================================
HOX2a_HOX2a
<---------
GLK1(1)
<---------
ZAT2
--------->
ARR14(2)
--------->
ZAT2
<-----------
RAV1(1)
--------->
At4g35610
->
ZAT14
<---------
ARR14(2)
----------->
RAV1(2)
--
SPL7
<---------
MYB46(3)
<---------
At4g35610
--->
SPL7
<---------
ARR11(3)
--------->
GLK1(1)
--
ZAT14
--------->
ARR11(3)
<---------
GLK1(1)
<---------
GLK1(1)
------
AtSPL3
--------->
LBD16
--------->
ATERF1(1)
<---------
YAB1
->
ZAT18
<---------
AGP1
<---------
LBD16
<------
ZmHOX2a(2)
<---------
At4g35610
------
AtSPL8
<---------
LBD16
==================================
HOX2a_HOX2a
--------
SPL14
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR14(2)
>
ALFIN1
<---------
CCA1(2)
<-----------
HVH21
--------->
ARR14(2)
------>
ZmHOX2a(1)
ggtctctggtggatctcttgctaaatggatcaccgggatttcagctggatccgccttagggtttctctattggtcctctggttcttctgattccatctct
15501400
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
<---------
ANAC46
<---------
ANAC58
<------
MYB46(1)
------>
ZmHOX2a(2)
<---------
ANAC58
<---------
DREB2C(2)
----------->
GT1
<------
MYB83
--------->
AHL20(2)
<---------
DEAR3(1)
<------
ZmHOX2a(2)
<---------
MYB46(3)
---------->
DOF2
<---------
ARR11(3)
--------->
MYB55(2)
----------->
GT1
--------->
At4g35610
<---------
AtMYB61
--------->
ANAC46
<---------
ANAC46
------>
ZmHOX2a(2)
--------->
MYB111(1)
<---------
WRKY12
<---------
ZAT6
<------
ZmHOX2a(2)
--------->
MYB111(2)
----------->
HVH21
<---------
ANAC46
<---------
ARR14(2)
---
--------->
MYB46(2)
<---------
At4g35610
<---------
MYB52(1)
<------
NtERF2
--------->
ARR11(3)
--------->
MYB52(2)
------>
ZmHOX2a(1)
<-----------------
AGL2
--------->
ARR14(2)
--------
ggtttgtttggtgggagtaatttattgtccttcgctgatagttcaacgccttctgtttgtggtgtaaaagtcggcgatctgaaaccgagatcgtttattc
15501500
--------->
ARR11(3)
<---------
ARR11(3)
<------
MYB83
<------
MYB46(1)
--------->
MYB46(2)
--------->
MYB52(2)
<---------
MYB46(3)
<---------
DEAR3(1)
<-------
TEIL
<---------
ARR14(2)
<---------
MYB46(3)
<---------
GLK1(2)
<---------
HSFB2a(1)
<---------
WOX13(1)
<---------
ANAC46
--------->
HSFB2a(1)
--------->
ATHB12
<---------
ANAC58
--------->
HSFC1(2)
<---------
AHL20(2)
<---------
AtLEC2
<---------
LBD16
------>
ZmHOX2a(2)
<---------
AHL20(2)
<-------
GAMYB
--------->
At4g35610
<---------
HSFC1(2)
--------->
AHL20(2)
<---------
MYB46(3)
<---------
LBD16
<---------
TOE2(2)
<----------
DOF2
------>
LBD16
<---------
At4g35610
<---------
TOE1(2)
<---------
MYB52(1)
<---------
MYB52(1)
->
KAN4(2)
<---------
ANAC58
<-------
TEIL
<---------
SPL7
<<<<<<<<<
TBF1
<---------
YAB1
cgaaattgtcgttgcctggttacagctctggattcatcttcggag
gttcggtgatcttcttcttcgttctttaatttcattgattctgttttttctctca
15501600
Previous
Next
AGI:
At4g32050.1
Description:
neurochondrin family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO44301.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Neurochondrin (InterPro:IPR008709)
Range:
from: 15496543
to: 15500853
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At4g32060.1
Description:
calcium-binding EF hand family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO44313.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 15501084
to: 15503599
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.