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Chromosome 1
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Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
<---------
ZAT18
--------->
ABI4(2)
<---------
ANAC58
------>
NtERF2
<---------
YAB1
<------
NtERF2
<---------
ANAC46
<------
ZmHOX2a(1)
---------->
CDC5
<------
NtERF2
-------
YAB1
<---------
At4g35610
<---------
ANAC58
--
ETT(2)
<---------
ZAT2
<---------
ANAC58
->
ANAC58
--------->
ZAT2
<-----------
RAV1(1)
--------->
GLK1(1)
->
ANAC46
--------->
ZAT14
--------->
GLK1(1)
<---------
AtMYB61
<------
MYB83
->
ANAC58
---------->
DOF2
<----------
DOF2
<---------
DEAR3(1)
------>
NtERF2
<------
MYB46(1)
<--
>
HVH21
----------->
GT1
<---------
ZAT14
<---------
GLK1(1)
<----------
DOF2
<---------
ANAC58
>>>>
atgaatgaggagtttaaagaaacactgaagttttctttggagaattccagctcggcgctcttagctttggtgccgaagatgcttggtttagagaaatcga
15291100
<-------
--------
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
ARR11(3)
<---------
ANAC46
----------->
HVH21
<-----------
RAV1(2)
<---------
ARR11(3)
--------->
ATHB12
--------->
ATERF1(1)
--------->
ARR14(2)
<---------
MYB46(3)
------>
NtERF2
------->
GAMYB
--------->
ZAT6
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
TOE2(3)
-------
ZAT6
--------->
ALFIN1
<---------
ARR14(2)
<---------
TOE1(3)
>>>>>
TAC1
<---------
DEAR3(1)
<---------
MYB46(3)
--------->
MYB52(1)
<-----------
GT1
gtgttacactagacggtggaggaacgatttgagggtgattcgtagttgttctcactatcggagcctcaggttgagtatttttaacgatctgactctgtag
15291200
--------->
ZAT14
--------->
ZAT18
<---------
ZAT14
--------->
ZAT14
--------->
ZAT18
<------
ZmHOX2a(1)
<---------
At4g35610
<------
NtERF2
<------
NtERF2
<---------
ZAT14
--------->
At4g35610
<---------
DEAR3(1)
<-----------
RAV1(2)
<---------
ARR14(2)
<------
NtERF2
----------->
HVH21
<---------
At4g35610
--------->
ARR14(2)
<-------
GAMYB
<-------
TEIL
--------->
ALFIN1
--------->
LBD16
----------------->
AGL1
<---------
LBD16
<---------
ANAC46
----------->
HVH21
<------
ZmHOX2a(1)
--------->
ALFIN1
<-----------------------
TaNAC69(2)
--------->
SPL7
--------->
At4g35610
<---------
ANAC58
<---------
ANAC58
<---------
TOE2(3)
<---------
At4g35610
<---------
ANAC58
----------->
RAV1(2)
--------->
ZAT14
----------->
HVH21
-
--
ZAT14
----------->
RAV1(1)
<-----------
HVH21
<---------
ANAC58
<---------
TOE1(3)
--
->
ZAT14
<---------
RAP2.6(2)
------->
TEIL
------->
TEIL
<---------------
AtSPL3
--------->
MYB52(1)
-----
tttctgagatgcggcagaggaagtggagtgaaccggtccgcgtctgaaccgagcgtgaccagtacggttaaggagagaaatgacggttttgaatttagaa
15291300
<-----------
HVH21
--------->
ANAC55(1)
<---------
TOE2(3)
--------->
ANAC58
<---------
WRKY38(1)
<---------
ARR14(2)
<---------
WRKY12
<-------
GAMYB
--------->
ANAC58
--------->
ZAT14
<---------
MYB46(3)
<-----------
RAV1(2)
--------->
At4g35610
<---------
DEAR3(2)
<------
ZmHOX2a(2)
<---------
LBD16
--------->
SPL7
--------->
ANAC55(2)
--------->
ARR11(3)
------------>
AtMYB77
--------->
ARR14(2)
<---------
ARR11(3)
<---------
MYB52(1)
<---------
DEAR3(1)
<---------
ARR14(2)
--------->
ZAT14
<---------
DOF5.7(2)
<---------
SPL7
--------->
ARR14(2)
--------->
bZIP60(1)
<---------
WRKY45
----------->
HVH21
<---------
LBD16
<---------
bZIP60(1)
--------->
WRKY18(1)
--------->
HSFB2a(2)
--------->
ANAC46
--------->
ZAT14
<---------
At4g35610
<---------
HSFB2a(2)
<---------
ANAC55(2)
-------->
At5g28300
--------->
ZAT2
<---------
LBD16
===============
HOX2a_HOX2a
--------->
GT1
<---------
HSFB2a(2)
<---------
MYB46(3)
<------
ZmHOX2a(1)
<XXXXXXXXXX
---->
MYB52(1)
------>
ZmHOX2a(2)
<-----------
RAV1(1)
----------->
HVH21
<---------------
AGL15
acggtgaagtcagtgatctcggagcagtcaacgttgtgttgttgttcgggacggttagagaggacacggatcagatgttccatactttgtaaaccttgcg
15291400
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ICU4
--------->
LBD16
--------->
ATHB12
--------->
At4g35610
<---------
YAB1
--------->
ARR14(2)
<---------
At4g35610
--------->
ICU4
--------->
ARR11(3)
--------->
ZAT2
------>
NtERF2
<---------
ANAC58
<------
ZmHOX2a(1)
<---------
ZAT2
--------->
ANAC58
--------->
YAB1
<---------
ARR14(2)
------->
TEIL
<---------
MYB52(1)
--------->
ANAC58
<---------
ICU4
<------
ZmHOX2a(1)
XXXXXXXXXX
MIR2111A/B
--------->
ARR14(2)
--------->
ICU4
<---------
TOE2(3)
atgcagcttcctgaatagccgtttgatcatctatcttagggaaacgcattagatcgacggccat
gatgatttcttggtctgaggattttggagaggaacg
15291500
<---------
LBD16
----------->
GT1
<---------
ANAC55(1)
<---------
ANAC46
<--
<---------
ANAC58
<------
<---------
ANAC55(2)
--------->
WRKY38(1)
--------->
ANAC55(2)
--------->
At4g35610
<---------
ANAC58
--------->
ALFIN1
<----------
ID1
<-------
TEIL
<------
ZmHOX2a(1)
>>>>>>>>>
TBF1
*
TSS
<------
ZmHOX2a(1)
---------->
DOF2
-----
>>>>>>>>>
TBF1
<---------
YAB1
>>>>>>>>>
TBF1
--------->
CCA1(2)
----------
ttgaagaagaagaagacgaagacgagagagagaaatggttgtgat
ggagaagagagaagaagaaggatgcgtgatatatggggaaaagaggaggtgaccg
15291600
--------->
ANAC58
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC55(1)
<---------
LBD16
<
<---------
WOX13(1)
--------->
ANAC46
<
--------->
ATHB12
--------->
LBD16
<-
<---------
YAB1
--------->
GLK1(1)
<---
--------->
ARR11(3)
--------->
MYB46(3)
<---------
ARR14(2)
--------->
YAB1
<---------
GLK1(2)
--------->
MYB52(1)
--------->
ARR14(2)
<---------
ATHB12
----------->
ARR10
<------
ZmHOX2a(1)
<---------
DEAR3(1)
<---------
GLK1(1)
--------->
ANAC58
---------
HVH21
==================
HOX2a_HOX2a
<------
ZmHOX2a(1)
--------->
ANAC58
---
LBD16
--------->
LBD16
------>
ZmHOX2a(2)
<---------
TOE2(3)
--------->
ANAC58
---->
LBD16
<---------
LBD16
==============================
HOX2a_HOX2a
--------->
WOX13(1)
->
HVH21
<---------
LBD16
--------->
MYB46(3)
<---------
TOE1(3)
--------->
DAG2
--
ggtcagatttttggtgattttttagtcaaaccgggaaggaggttttgatccaacggctgtgattgagttgaggatttccacggaataaagcaatcaacag
15291700
<---------
ALFIN1
-------->
P
------>
MYB46(1)
<---------
ALFIN1
<---------
MYB55(2)
--------->
MYB46(3)
--------->
DEAR3(2)
--------->
TCP15(2)
--------->
PCF2
<---------
TCP15(1)
---------->
DOF2
---------->
DOF2
<---------
TCP20
<---------
TOE1(3)
------->
GAMYB
------>
ZmHOX2a(1)
<---------
PCF2
<---------
TOE2(3)
<---------
RVE1(1)
------
MYB83
<-----------
TCP11(1)
<-----------
GT1
<---------
CCA1(1)
------
MYB46(1)
<---------
ANAC46
<---------
AHL20(2)
--------->
ARR11(3)
--------
AtMYB61
<---------
ARR14(2)
--------->
At4g35610
<---------
ARR11(3)
<--------
------
MYB52(1)
<---------
TOE2(3)
----------->
RAV1(2)
<---------
MYB52(1)
<-----------
GT1
-------
------->
MYB59
<---------
TOE1(1)
------>
MYB83
--------->
AHL20(2)
<---------
AHL20(1)
---------
tttggtctcctcaaagttcgaggttactgggacccacccctggcatccgaattttatcgttacttcaaattcaagatatttttcaacccaaaaagataat
15291800
<---------
REM1(1)
-----
<---------
HSFB2a(1)
--------->
ALFIN1
---------->
DOF2
--------->
HSFB2a(1)
--------->
DAG2
<---------
WRKY18(1)
<---------
GLK1(2)
--------->
ANAC58
<---------
ANAC58
-
ARR11(3)
<---------
ATHB12
--------->
ANAC58
<---------
AtLEC2
-->
MYB52(1)
<---------
ALFIN1
--------->
WOX13(1)
---------->
DOF2
<---------
ANAC58
>
ARR11(3)
<-----------
GT1
--------->
YAB1
--------->
At4g35610
---------->
DOF2
-------------
ggatggacagaattttctctaaataacaacactcttaacaaaaatcattcaacttagcttaagcaaaaggtgtagaaagaagtttgcatgaccaaagtaa
15291900
<-------
GAMYB
<------
MYB83
--------->
ANAC58
<------
MYB46(1)
--------->
ATHB12
<---------
At4g35610
<--------
ATHB1
<---------
ZAT2
<---------
ICU4
--------->
ANAC46
--------->
ZAT2
<---------
TOE2(3)
--------->
AHL20(1)
--------->
ANAC58
--------->
At4g35610
--------->
YAB1
<-------
TEIL
----------->
RAV1(2)
<---------
WRKY38(1)
------>
GT1
<---------
ATHB12
<-----------
RAV1(2)
<---------
WRKY12
-
---->
AGL1
--------->
ICU4
---------->
DOF2
--------->
MYB59
<-----------
HVH21
<
gtaaaaataatgtcaatgattcattcacacacaatggagaaagagggccagctggaatttggttgaggcaagagaaggaagagttgtcaacgagagacag
15292000
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AGI:
At4g31550.1
Description:
WRKY11 (WRKY DNA-binding protein 11); transcription factor. Identical to Probable WRKY transcription factor 11 (WRKY11) [Arabidopsis Thaliana] (GB:Q9SV15;GB:Q8H1G1;GB:Q93YX0); similar to WRKY17 (WRKY DNA-binding protein 17), transcription factor [Arabidopsis thaliana] (TAIR:AT2G24570.1); similar to WRKY transcription factor 11 [Capsella rubella] (GB:AAS66778.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657)
Range:
from: 15289953
to: 15291545
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.