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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                   <
          <---------ANAC55(2)                                                                    <--
          --------->ANAC55(2)                                          --------->TOE1(3)         ---
         <-------TEIL                       --------->LBD16            --------->TOE2(3)        <---
 <-------TEIL         ----------->GT1  --------->GLK1(1)               <----------DOF2          <---
 
aacatacagaaatacatatcaagaccagttacaaaacatcagaaacccagaacaaaacttgaaggaacatacaactttaaaaaactgaaacagagaccaa  15178400
                                              --------->DAG2
                                             ---------->DOF2
                                      <-------GAMYB
                                   <---------ANAC58
                                   ----------------->AGL1
---------YAB1                      <---------ANAC58                                               --
-------ICU4                        <---------ANAC46                                   <---------AtMYB61
------>YAB1                   <---------At4g35610                     ----------->RAV1(2)      <----
------ATHB12                  --------->At4g35610            --------->TOE2(3)        --------->ALFIN1
------ATHB51                <-----------RAV1(2)----------->GT1       --------->MYB52(1)   ----------
 
ttataacagggtttacagacgatgaactgtctcagatggcctgttgagaaaagtaataaacaaaacttaacatacctgataccagagagatggtggtata  15178500
                                                                                       --------->CCA1(2)
                                                                             ------>ZmHOX2a(1)
                                                                             <---------YAB1
      <---------TOE2(1)                                                     --------->TOE2(3)
    --------->CCA1(2)                                          --------->ANAC46     <---------YAB1
------->TOE2(3)                                           <-----------GT1  <---------ICU4          <
-------GT1<------ZmHOX2a(1)                       <-----------GT1 <---------TOE2(2)<---------TOE2(3)
->GT1 <---------TOE1(1)                        ----------->GT1 <---------ALFIN1   --------->YAB1  <-
 
acctttgatacgaggaaactataccgaaacaagtttcaatacagagtagattgtaacaaaatttccacacaggtttaatccttattgatgatatgcctct  15178600
                             ----------->GT1
                          --------->DAG2
                          ------------------------>ANAC81     <---------AHL20(2)
          ----------->GT1--------->DAG2                       --------->AHL20(2) --------->CCA1(2)
      <---------TOE2(3) ---------->DOF2                ----------->GT1          --------->ARR11(3)
      <---------YAB1 --------->ANAC46                 --------->ANAC58          <---------ARR11(3)
---------MYB52(1)    --------->ANAC58                 --------->ANAC58      ---------->DOF2   <-----
------GAMYB          --------->ANAC58            <----------ID1    ----------->GT1     --------->TOE2(3)
 
cggttgattaagcttgtaaattccaagaaaaggggataaatgaaatcacatggggacaaggaaatataaatagaaaaaaaaaagatataaacttaaactt  15178700
                                                      <-----------GT1
                                                     --------->KAN4(2)
                                                    <---------KAN4(1)
                                                    <----------TaMYB80
                                              ---------->DOF2
                                            ------>ZmHOX2a(1)
                                           --------->TOE2(3)
                                        --------->ARR14(2)                        --------->ARR11(3)
                                        <---------ARR11(3)                  --------->ANAC58
                                        <---------ARR14(2)                  --------->ANAC58     <--
                           ----------->GT1 --------->TOE1(3)             *TSS------------>CBF    <--
                         ---------->DOF2--------->ARR11(3)             <------MYB46(1)    <---------
                     --------->ANAC58  --------->CCA1(1)               <------MYB83 >>>>>>>>>RAP2.2-
                     --------->ANAC58  --------->RVE1(1)      <---------REM1(2)   <---------ARR11(3)
                  ------------------------>ANAC81   --------->KAN4(1) --------->MYB59   --------->ANAC58
                <----------ID1    --------->YAB1   <---------KAN4(2)<---------MYB52(1)---------->DOF2
-----DOF2    ---------->DOF2   --------->WOX13(1)  ---------->TaMYB80 --------->MYB46(2)--------->ANAC58
 
tattgaagtctctctcaaaagaacaagtaaaagtaaatcaaaatatcctcaaagaatataccatctacaaggttaggttacccaatatctaaagcaacaa  15178800
                                       --------->ANAC46
                                     <---------ALFIN1                                              <
                           <---------ANAC58                        --------->ANAC58                -
                           <---------ANAC58                        --------->ANAC58            <----
            <---------AHL20(2)  --------->TOE2(3)--------->DAG2    --------->ANAC46 --------->ARR11(3)
-------ANAC58   <---------AHL20(2)   --------->ZAT6                --------->ANAC55(2)         <----
-------ANAC58  <---------AHL20(2)   --------->ZAT14  --------->ZAT18                <---------ARR11(3)
-ID1       --------->AHL20(2)<---------CCA1(2)  ---------->DOF2    <---------ANAC55(2)    <---------
---------->GT1 --------->AHL20(2)   <---------ZAT14  <---------ZAT18            ---------->DOF2<----
 
gcttgtgaaaaccattaattttatattcttgcttatctcaacactgcatcagaaagtggacaagttgaatacgaaatggacataaaagacattcttttgc  15178900
                                  <-----------GT1
                               <---------ICU4
                             <---------YAB1
---------HSFB2a(2)         --------->AHL20(2)
-------->HSFB2a(2)         <---------AHL20(2)               ----------->GT1
-----ANAC58          --------->ANAC58                     ----------->GT1
-----ANAC46          --------->ANAC46                    --------->DAG2           ---------->DOF2
-DOF2     ---------->DOF2 --------->AHL20(2)            ---------->DOF2      <----------ID1
-----ANAC58          --------->ANAC58              --------->At4g35610    ---------->DOF2     <-----
 
gtctagatgataccaaagtatggcacgaaattaatattcacaaaatggggaaatagctgaaaagtgaaaaaatcaacaaaagaacaaaagcttgaagctt  15179000
                   --------->ZAT6
             ----------->GT1
          --------->ARR14(2)                                              --------->DAG2
          <---------ARR14(2)                                    --------->AHL20(2) <---------YAB1
       --------->YAB1                                           --------->YAB1  --------->ICU4
      <---------ATHB12                                     ------------>CBF----------->GT1        --
    --------->WOX13(1)                              <-----------GT1      ---------->DOF2    ------>MYB46(1)
-----DOF2<---------CCA1(2) ----------->GT1     --------->AHL20(2)     --------->AHL20(2)    ------>MYB83
 
tactcatcaatcatatctgttaaaactagggggaaaaaaactgaatgcgaataaataaccctggcaataaaaaataaaaagtaattctcattacctacaa  15179100
                           --------->ANAC58
        ------->TEIL       --------->ANAC58                 <---------ZAT6             <----------DOF2
     --------->ANAC58      <---------TOE2(3)          --------->ZAT6               --------->ANAC46
     --------->ANAC58  --------->ARR11(3)        --------->YAB1                 <-------TEIL
-------->DOF2     --------->MYB46(3) *TSS --------->At4g35610  ---------->DOF2 --------->CCA1(2)
 
acaaagacacgaacttgatcaacaaatatcaaggaaacgagaattagatgaagaataagactagtggaaagaccagagagagatacaggcctttcaatgg  15179200
                                                                             <------ZmHOX2a(2)
                                                                   <---------O2
                                                                   --------->TGA1a
                                                                   --------->ANAC55(1)
                                                                   <---------ANAC55(2)
                                                                   --------->O2
                                                                   --------->ANAC58
                                                                   --------->ANAC55(2)
                                                                   <---------TGA1a<---------ALFIN1
                               --------->ARR11(3)                  --------->ANAC58
                          --------->YAB1                           <---------ANAC46        <--------
                     ------>ZmHOX2a(1)                 --------->ZAT6       <---------ARR11(3)
                <---------GLK1(1)                   --------->AtMYB61       --------->ARR11(3)
                --------->GLK1(1)             --------->YAB1      <-----------------------TaNAC69(2)
     <---------ANAC55(2)<-----------HVH21    <---------YAB1    <-----------HVH21  --------->ZAT6 <--
 
aagctattacatgagtgagaactcctcagtcatagctcttgaagaacgatgatcaccatcactagcagtcacgtatgaagatcgaacactctcttgacct  15179300
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AGI:  At4g31240.1   
Description:  electron carrier. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G60420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43974.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin-like; (InterPro:IPR011594); contains InterPro domain Thioredoxin fold (InterPro:IPR012335)
Range:  from: 15176461    to: 15178774    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g31250.1   
Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G20190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43973.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kin
Range:  from: 15178931    to: 15181757    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g31248.1   
Description:  other RNA
Range:  from: 15179138    to: 15180809    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.