Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC58
--------->
LBD16
<---------
ANAC58
--------->
ANAC46
<---------
ANAC55(2)
--------->
LBD16
--------->
ANAC55(2)
----------->
HVH21
<-----------
GT1
--------->
DAG2
<---------
WOX13(1)
--------->
AHL20(2)
---------->
DOF2
<---------
YAB1
--------->
ZAT14
<----------
DOF2
------->
GAMYB
<---------
ANAC46
<---------
ICU4
--------->
ZAT18
<---------------
AGL15
--------->
ANAC58
--------->
YAB1
---------->
DOF2
----------->
GT1
--------->
At4g35610
<------
ZmHOX2a(2)
<---------
ZAT14
<---------
DAG2
--------->
MYB52(1)
<---------
ANAC58
<---------
ARR11(3)
<<<<<<<<<<<<<<<<<
LFY
--------------->
AGL15
--------->
ANAC58
<---------
ANAC58
--------->
ARR11(3)
--------->
ICU4
--------->
At5g28300
<------
ZmHOX2a(1)
--------->
ALFIN1
----
ttagatcatgactgaccccgaaaagattagtacagtggtaaattacttactttatagaggaaacaactgcaagaaaagtggagtttgttttgcgttcttc
15054500
--------->
ANAC46
<---------
ANAC55(2)
--------->
ANAC55(2)
--------------->
AtSPL8
--------------->
AtSPL3
----------->
GT1
<-------
TEIL
<---------
YAB1
----------->
GT1
<---------------
AtSPL3
--------->
ANAC46
--------->
ARR14(2)
--------->
ANAC58
--------->
MYB52(1)
<------
ZmHOX2a(1)
<---------
TOE2(3)
--------->
At4g35610
----------->
GT1
<----------
ID1
--------->
TOE2(3)
--------->
ZAT2
<---------
AHL20(1)
----------->
GT1
<----------
DOF2
<---------
ZAT2
<---------
ARR11(3)
--------->
ANAC58
---------->
DOF2
<---------
ARR14(2)
---------->
CDC5
--------->
AHL20(1)
--------->
ANAC58
----->
HSFB2a(2)
----------->
GT1
------->
TEIL
--------->
YAB1
--------->
ANAC58
<---------
AHL20(2)
<---
caaaatagtgactgaaagaggaaaaacatatacgtactttaatgtatgataagactcagcacgaaaatagcaaaatatttcaatggaaaaaacgaaattg
15054600
<---------
GLK1(1)
--------->
CCA1(2)
--------->
GLK1(1)
<---------
At4g35610
--------->
At4g35610
--------->
TOE2(3)
<---------
ALFIN1
--------->
ARR14(2)
--------->
ARR11(3)
<------
NtERF2
<---------
ARR14(2)
<---------
ARR11(3)
--------->
PCF5
<------
ZmHOX2a(1)
--------->
GLK1(1)
------
ANAC46
--------->
PCF2
---------->
DOF2
<---------
ARR11(3)
<--------
tttgtattcttcattttcttcagggcttctaatggccccatttcagcatacaaaaaaaaggatatgttaatgggatgatatctatctatatgggctttag
15054700
--------->
MYB52(1)
--------->
ANAC58
----------->
HVH21
--------->
ANAC46
----------->
RAV1(2)
--------->
ANAC58
>>>>>>>>>
RAP2.2
--------->
YAB1
<-----------
RAV1(2)
--------->
At4g35610
<---------
YAB1
--------->
ANAC46
--------->
ARR11(3)
--------->
DOF5.7(2)
--------->
ANAC55(1)
--------->
ANAC46
<---------
At4g35610
--------->
TOE1(3)
--------->
ANAC58
--------->
ARR14(2)
--------->
GLK1(2)
--------->
TOE2(3)
<----------
DOF2
--------->
ETT(2)
<---------
ARR11(3)
<-
--
DOF2
<------
ZmHOX2a(2)
--------->
ANAC58
<------
ZmHOX2a(1)
---------->
DOF2
---------
aaacgttatcatggatcacggtattagctttgaaattacacgaaatctcgaccgcaggatagacgacaatatctaaaagcatctgacggtagtaacacga
15054800
<---------
ANAC58
--------->
ANAC55(2)
<---------
ANAC58
<---------
TOE2(2)
<---------
TOE1(2)
<-----------
GT1
<---------
ANAC58
<---------
ANAC58
------->
GAMYB
--------->
PCF2
<---------
ANAC58
----------->
GT1
<---------
TCP15(1)
<------
MYB83
--------->
ANAC58
------>
ZmHOX2a(2)
<---------
PCF2
<---------
ANAC58
--------->
ANAC58
<------
ZmHOX2a(2)
<------
MYB83
--------->
MYB59
--------->
MYB52(1)
--------->
ARR11(3)
<------
MYB46(1)
<---------
ZAT2
--------->
ANAC58
--------->
ARR14(2)
--------->
MYB59
--------->
ZAT2
--------->
ANAC46
<---------
ARR11(3)
--------->
MYB111(1)
<---------
MYB52(1)
--------->
ANAC58
--------->
ANAC58
<
-----------
CBF
<---------
ALFIN1
<------
MYB46(1)
--------->
LBD16
--------->
ANAC58
<-
>
ZAT6
<--------
P
<-----------
RAV1(2)
<---------
AHL20(2)
*
TSS
<---------
ARR14(2)
gtattgtctctagtaggtcccaccatgttccagttgggtttcttacgttttaaatgcccgagcaacggaaaaatgtcc
gagaccaagacagatcgtttta
15054900
<----------
DOF2
<---------
DAG2
--------->
GLK1(2)
<-----------
ARR10
<---------
GLK1(1)
<---------
GLK1(2)
<------
ZmHOX2a(2)
--------->
LBD16
<---------
ARR11(3)
<---------
HSFB2a(2)
--------->
ARR11(3)
--------->
YAB1
--------->
HSFB2a(2)
--------->
RVE1(1)
<---------
ATHB12
==
<---------
LBD16
--------->
CCA1(1)
<---------
YAB1
<-
<---------------
AGL15
--------->
AHL20(2)
--------->
ARR14(2)
--------->
YAB1
--
-----------------
AGL1
<---------
AHL20(2)
--------->
ARR11(3)
<---------
WOX13(1)
<-------
----------
GT1
<---------
At4g35610
--------->
LBD16
<---------
AHL20(2)
--------->
GLK1(1)
ttttctcttctgggaatctcagctttttttaaaaaaatatccagagtccagatcatcgtattcaatttgattaatcataaatcagatttcatttcgttat
15055000
--------->
ARR14(2)
<------
ZmHOX2a(1)
=============================
HOX2a_HOX2a
--------->
LBD16
<---------
TOE2(3)
<---------
TOE1(2)
<---------
ICU4
<---------
TOE2(2)
<-----------
GT1
<---------
YAB1
<---------
LBD16
<------
ZmHOX2a(2)
<---------
ANAC58
<---------
LBD16
<---------
ARR14(2)
<---------
ARR11(3)
<---------
ANAC58
===================================
HOX2a_HOX2a
--------->
WOX13(1)
<---------
ANAC58
<------
---------
DOF2
--------->
ARR14(2)
<---------
AHL20(1)
<---------
ANAC58
--------->
ICU4
---->
ZmHOX2a(1)
--------->
GLK1(2)
--------->
ARR11(3)
<---------
ANAC58
<---------
YAB1
--
MYB52(1)
<---------
ARR11(3)
--------->
AHL20(1)
<-------
TEIL
<---------
ANAC58
cctttcccaggattcaatttcttcgaatccgatcgaatttcgaatattttcaatccgagttcgagcgttcatggcttccttgtcttgtcattaatgcttt
15055100
----
----
<---
<---
<----
-----
<----
<----
-----
--------->
ATHB12
--------->
MYB52(2)
--------->
ATHB12
<------
MYB46(1)
<---------
ICU4
<------
MYB83
-------->
ATHB1
<---------
ATHB51
<---------
MYB46(3)
<---------
YAB1
--------->
ICU4
<---------
AtMYB61
--------->
TOE2(3)
--------->
GLK1(1)
<---------
DEAR3(1)
--------->
ARR14(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
<-----
<---------
ARR14(2)
<---------------
AGL15
<------
ZmHOX2a(1)
<------
NtERF2
----
DOF2
--------->
YAB1
<-----------
GT1
--------->
YAB1
----------->
HVH21
<---------
TOE2(3)
tggttcgaatccataaaaatcattgatttcacctattttcagaaatcagaaata
atgggtttatcaaatgacaggatcaaattcaacgttggtggcagaa
15055200
=======
--------->
At4g35610
-------
--------->
ANAC58
<------
ZmHOX2a(2)
----------->
HVH21
<------
--------->
ANAC58
<-------
----->
HSFB2a(1)
--------
----->
HSFC1(2)
<-------
------
HSFB2a(1)
<------
NtERF2
<---------
LBD16
------
HSFC1(2)
--------->
ZAT2
--------->
LBD16
-------
ARR10
---------->
DOF2
<---------
LBD16
---->
ARR14(2)
<---------
DOF5.7(2)
<---------
YAB1
<---------
LBD16
-----
ARR11(3)
--------->
MYB52(1)
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(le3)
-------->
P
-----
ARR14(2)
--------->
ANAC58
--------->
GLK1(2)
--------->
HSFB2a(1)
======
---->
GLK1(2)
--------->
ANAC58
<---------
ARR14(2)
<---------
HSFB2a(1)
------
----
GLK1(2)
------->
GAMYB
<---------
ZAT2
<---------
LBD16
<---------
GLK1(2)
--------
tcttcgaaacgacagcgacaacgctcgctaacgcaggtcgcgattccttcttcggagcattattcgacgaaaattggaatctttcacaacccggggatct
15055300
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
===============
HOX2a_HOX2a
<-----------
RAV1(2)
-->
GLK1(1)
------>
ZmHOX2a(2)
---
GLK1(1)
====================
HOX2a_HOX2a
------>
ZmHOX2a(1)
--
ARR11(3)
--------->
ARR14(2)
--------->
LBD16
->
ARR14(2)
<---------
HSFB2a(2)
--------->
LBD16
--
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
LBD16
===============
HOX2a_HOX2a
--------->
HSFB2a(2)
--------->
ARR11(3)
----
>
ZmHOX2a(2)
<---------
ANAC58
<---------
ARR11(3)
------>
NtERF2
<---------
ANAC58
->
ARR11(3)
<---------
WOX13(1)
--------->
ARR11(3)
--------->
LBD16
<---------
ANAC58
cttcatcgataggaatccagattgcttcgctgttcttctcgatcttctccgaacaggagacttaaacatcccgcctaatatcccggagcgtctccttcac
15055400
Previous
Next
AGI:
At4g30940.1
Description:
potassium channel tetramerisation domain-containing protein. similar to potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G24240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80633.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45068.1); contains InterPro domain Potassium channel, voltage dependent, Kv, tetramerisation; (InterPro:IPR003131); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210)
Range:
from: 15054879
to: 15056832
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.