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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
TEIL
------->
TEIL
<---------------
AtSPL3
--------->
MYB59
--------->
At4g35610
--------->
ZAT2
<---------
ZAT2
<---------------
AtSPL8
<-----------
RAV1(2)
--------------->
AtSPL8
<---------
ZAT18
<---------
AHL20(2)
-----
--------->
ZAT18
--------->
AHL20(2)
-----
<----------
DOF2
<---------
ZAT14
------->
TEIL
--------->
ZAT6
<---------
YAB1
---->
YAB1
<---------
DAG2
--------->
ZAT14
--------->
ANAC55(2)
<-----------
GT1
--------->
AHL20(2)
-------
AGL15
<---------
YAB1
<---------
At4g35610
<---------
WOX13(1)
<---------
YAB1
<XXXXXXXXXXXXX
agagtcacaatcaccttttgattatgtagtgcagctggttatgtacgtatgtgaatgacattaacaccattttaatagtacaattcaatatgatcaacta
14507000
--------->
ZAT6
--------->
GLK1(2)
<---------
TOE2(3)
<---------
ARR11(3)
--------->
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(1)
<---------
AHL20(2)
---->
ANAC58
--------->
CCA1(1)
<---------
AHL20(1)
<---------
YAB1
<---------
ICU4
---->
ANAC58
--------->
RVE1(1)
--------->
AHL20(2)
----------->
GT1
--------->
ICU4
XXXXXXX
MIR841B*
<---------
YAB1
<-----------
GT1
--------->
YAB1
----------->
GT1
gcaatttgttgaaaaaaatcttatagttttcatctatataacaatataatataaaactatcaaaatgttattaattaagagtaattaagactattgagcc
14507100
--------->
ETT(2)
<------------
CBF
<---
>>>>>>>>>>
AtTINY2
<-------
TEIL
--------->
YAB1
<-------
<---------
ICU4
<---------
ETT(2)
<---------
MYB46(3)
---------->
DOF2
<--------
<-----------
GT1
<---------
YAB1
---------->
DOF2
<---------
YAB1
<-----------
HVH21
atattttacatctcttcattacattactatcgacatggttttgaaaagatggttcatgagtcttattgataaagaattttaagagtcacagtcacctttt
14507200
--------->
ANAC46
--------->
O2
--------->
ANAC46
<------------
CBF
----------->
GT1
--------->
bZIP60(2)
<---------
YAB1
<---------
ANAC46
--------->
DAG2
--------->
ANAC58
<-------
MYC4
--------->
ANAC55(2)
--------->
bZIP60(2)
------->
MYC3
<---------
ANAC55(2)
------------>
CBF
----------->
HVH21
<-------
MYC3
<---------
TOE2(3)
--------------->
AtSPL8
--------->
ANAC58
------->
MYC2
<---------
WOX13(1)
<---------------
AtSPL8
--------->
TGA1a
<-------
GAMYB
<---------
WOX13(1)
---------->
DOF2
--------->
ANAC58
<------
MYB83
--------->
ATHB12
================================
bZIP_DOF
<---------
MYB46(3)
--------->
ATHB12
--------->
YAB1
--------->
TGA1a
<------
MYB46(1)
<---------
YAB1
------------>
CBF
--------->
O2
<---------
REM1(2)
------
AHL20(2)
<---------
DEAR3(2)
>>>>>>>>>>>>
WRKY18
--------->
AHL20(2)
--------->
ANAC58
---
DOF2
<---------
DEAR3(1)
<---------
TOE2(3)
--------->
WOX13(1)
--------->
ANAC46
-
DAG2
<---------
ANAC46
<-------
MYC2
<------------
CBF
<---------
ATHB12
--------->
ANAC46
tattttgttttgtagagtcggttgcacatgtgattgacgattgacgtaaacaccaattaaaaagtacaattctatatgcacacgacacgacacaacacgg
14507300
--------->
LBD16
------>
ZmHOX2a(1)
--------->
ANAC46
------>
ZmHOX2a(1)
------------>
CBF
---------->
DOF2
<---------
ALFIN1
------------>
CBF
--------->
ANAC46
----------->
GT1
--------->
ARR11(3)
<----------
DOF2
--------->
AHL20(2)
-------->
P
----------->
TBP
<------------
CBF
<---------
DAG2
--------->
TOE2(3)
<-----------
GT1
----
gctataaataagttaagacattgctcctcctcttctcatcacttttccaatctctcaacataaaatcccacaacaattcacaacccgaaaaaagacagag
14507400
<-----------
GT1
<-----------
HVH21
<----------
DOF2
--------->
ABI4(2)
------>
NtERF2
<---------
ZAT18
<---------
RAP2.3(1)
--------->
TOE2(2)
--------->
ANAC46
--------->
TOE1(2)
<---------
DEAR3(1)
<---------
ANAC58
--------->
SPL7
--------->
WOX13(1)
------>
ZmHOX2a(1)
<------
NtERF2
----
--------->
GLK1(2)
--------->
At4g35610
--------->
ARR14(2)
<---------
At4g35610
--------->
YAB1
<---------
ARR14(2)
<---------
ZAT18
<---
--------->
DEAR3(1)
<---------
ATHB12
--------->
TOE2(2)
--------->
TOE1(3)
<---------
ANAC58
--------->
ATERF1(1)
--------->
WOX13(1)
--------->
TOE1(2)
--------->
TOE2(3)
<---------
ATHB12
-------->
CBF
<----------
DOF2
<---------
GLK1(2)
--------->
ANAC46
--------->
ZAT18
<-------
aca
atggcacagcccatgcgcttcatgctcaatcatatagaaacagaatcctacggcgctttcacccctcaaaaccttagtccgctgatcaatcgtgcga
14507500
--------->
YAB1
<------
NtERF2
<---------
DEAR3(2)
--------->
ATERF1(1)
<---------
MYB52(1)
<---------
ATERF1(1)
----------->
RAV1(2)
<------
ZmHOX2a(2)
--------->
At4g35610
--------->
ARR11(3)
<---------
ANAC55(2)
<------
NtERF2
<---------
HSFB2a(1)
<------
ZmHOX2a(2)
------>
NtERF2
--------->
HSFB2a(1)
================================
HOX2a_HOX2a
<---------
ANAC58
<---------
ARR14(2)
<---------
SPL7
<---------
HSFC1(2)
<-----------
HVH21
<------
NtERF2
--------->
HSFC1(2)
--------->
ARR14(2)
<-----------
HVH21
<---------
ARR14(2)
<---------
At4g35610
<---------
ANAC58
<---------
ARR11(3)
<---------
ANAC46
<---------
ALFIN1
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
ARR14(2)
--------->
ANAC46
--------->
LBD16
--------->
DEAR3(1)
<XXXXXXXXXXXXXXXXXXXX
MIR399A
<---------
ALFIN1
<---------
LBD16
--------->
ATERF1(1)
<-----------
HVH21
<------
NtERF2
--
----->
ARR14(2)
<-----------
ARR10
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC58
<----
------
ARR14(2)
<---------
CCA1(2)
<---------
ANAC46
<---------
ARR14(2)
---------->
ID1
-----
--
TOE1(2)
--------->
At4g35610
<-----------
HVH21
<------
ZmHOX2a(1)
<----------
DOF2
<----------
ttccacacactcgagctcaaatctccggatcacctgtcgtagccgtcggccgaggatcatcaggtcggaccttctttggcgtcaatgtggaattaccagg
14507600
<---------
SPL7
--------->
DEAR3(1)
------>
NtERF2
--------->
ANAC58
--------->
ANAC46
--------->
ANAC46
--------->
DEAR3(1)
--------->
ANAC58
-------->
P
--------->
ANAC58
------>
MYB83
--------->
ANAC58
------>
MYB46(1)
--------->
ANAC46
------>
NtERF2
--------->
AtMYB61
<---------
ALFIN1
<---------
ALFIN1
--------->
DEAR3(1)
--------------------->
TaNAC69(2)
--------->
ANAC58
------
-----
ARR14(2)
<---------
ALFIN1
--------->
ANAC58
--------->
HSFB2a(2)
-------
---->
ARR14(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
HSFB2a(2)
--------
-
GT1
<---------
WRKY18(1)
--------->
ANAC46
<---------
ALFIN1
<--------
tctgcctcttgaccactccatccacgccgaacagttccttctcgccaacctcgccctccacttcgagcaaaaactcgaatgcatagccatctccactaac
14507700
<------
------>
MYB46(1)
--------->
MYB46(3)
<---------
MYB59
--------->
ANAC58
--------->
ZAT2
--------->
ANAC58
--------->
At4g35610
------->
TEIL
------>
NtERF2
<---------
ATHB12
--------->
ANAC58
<---------
HSFB2a(2)
<---------
At4g35610
<---------
ARR14(3)
-------->
P
<---------
LBD16
<---------
ALFIN1
<---------
ARR11(3)
------>
MYB46(1)
==============================
RAV
<-----------
ARR10
------>
MYB83
--------->
HSFB2a(2)
<---------
ZAT2
--------->
ARR14(3)
--------->
MYB52(1)
<-----------
RAV1(2)
--------->
ZAT14
--------->
ARR11(3)
------>
MYB83
--->
RAP2.6(3)
--------->
RAP2.6(2)
--------->
CCA1(2)
--------->
ANAC58
-->
MYB52(1)
--------->
AtLEC2
--------->
WOX13(1)
<---------
ARR11(3)
--------->
ANAC46
--
--->
HVH21
<------
ZmHOX2a(1)
------>
NtERF2
--------->
AHL20(2)
--------->
GLK1(2)
--------->
MYB52(1)
-
MYB52(2)
--------->
LBD16
<-----------
RAV1(1)
--------->
ARR11(3)
<---------
MYB52(2)
ggctactacttccaggagccatgcggccactgctgccaattacttcataaaatcagagatatgtctgataccaaaatcttgctcacgaacccaaccggtc
14507800
--------->
ICU4
--------->
ANAC58
--------->
ANAC58
--------->
LBD16
--------->
DOF5.7(2)
--------->
ANAC58
------------------
<---------
HSFB2a(2)
--------->
TOE1(3)
--------->
HSFB2a(2)
--------->
TOE2(3)
--------->
ANAC58
--------->
ANAC58
<----------
DOF2
--------->
ANAC46
--------->
ANAC58
--------->
ARR14(2)
<-------
TEIL
<---------
LBD16
--------->
ANAC46
<---------
ARR14(2)
-----
HVH21
------>
MYB83
--------->
LBD16
<---------
HSFB2a(2)
-------->
DOF2
------->
TEIL
------>
MYB46(1)
<-----------
RAV1(2)
--------->
HSFB2a(2)
agaaaggaacatacatgaatctttcgaccttccttccgcaaggattaatctcccaggcaaacgtccctcgccttctcgagcggaactttaactgcatcga
14507900
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AGI:
At4g29570.1
Description:
cytidine deaminase, putative / cytidine aminohydrolase, putative. similar to cytidine deaminase, putative / cytidine aminohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G29580.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ49633.1); similar to Os01g0712700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044051.1); contains InterPro domain CMP/dCMP deaminase, zinc-binding; (InterPro:IPR002125); contains InterPro domain Cytidine deaminase-like; (InterPro:IPR016193); contains InterPro domain Cytidine deaminase, homodimeric; (InterPro:IPR006263); contains InterPro domain Cytidine and deoxycytidylate deaminas
Range:
from: 14507404
to: 14508488
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.