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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
MYB46(3)
<-------
GAMYB
<-----------
RAV1(1)
<---------
YAB1
--------->
At4g35610
<---------
ICU4
<---------
At4g35610
<---------
YAB1
<---------
ZAT2
<---------
ICU4
--------->
At4g35610
--------->
YAB1
<---------
At4g35610
<---------
YAB1
<-----------
RAV1(1)
--------->
YAB1
<---------
ZAT14
--------->
At4g35610
------
<---------
ICU4
--------->
ANAC58
<---------
At4g35610
------
<---------
YAB1
--------->
ANAC58
<-----------
RAV1(1)
==========
<---------
ICU4
<-------
TEIL
--------->
ZAT14
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
YAB1
------>
ZmHOX2a(1)
<-----------
HVH21
<---------
ARR14(2)
<---------
MYB46(3)
ctcatcatcatcatcattcttcctcttggactcagattcaatgtgtcactccagtactgggccatatactgctgctgctgttgttgttgttgaggactaa
13975500
<---------
ANAC58
--------->
ATHB12
<-------
GAMYB
<------
ZmHOX2a(2)
<---------
MYB46(3)
<---------
ZAT14
--------->
ARR11(3)
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
GLK1(2)
<---------
ARR11(3)
<---------
ANAC58
--------->
TOE1(2)
<---------
ANAC46
--------->
GLK1(1)
<---------
ANAC58
--------->
LBD16
<---------
At4g35610
<---------
GLK1(1)
--------->
ETT(1)
<---------
HSFB2a(2)
<---------
REM1(1)
--------->
ALFIN1
---->
DOF2
<---------
ANAC58
<---------
ANAC46
--------->
HSFB2a(2)
<-----------
RAV1(1)
--->
MYB52(1)
<---------
ANAC58
<---------
LBD16
<---------
MYB46(3)
--
=========
HOX2a_HOX2a
<-----------
HVH21
--------->
MYB52(1)
<---------
MYB46(3)
<---------
aggagatcatttgcttctggccttgcattgtcgggtcttgtcgttgctcaagtaccggaacgtatgatccgagttgttgttgctgattctgaagtgttgg
13975600
------>
ZmHOX2a(2)
=======
<------
ZmHOX2a(2)
========
---------
<--------
--------->
ANAC58
---------
--------->
ANAC58
<--------
--------->
GLK1(1)
----------->
GT1
---------
--------->
DAG2
<---------
ARR14(2)
<------
ZmHOX2a(1)
<--------
---------->
DOF2
<---------
TOE2(3)
--------->
ARR14(2)
==============================
HOX2a_HOX2a
---->
ZmHOX2a(2)
--------->
MYB52(1)
<------
ZmHOX2a(1)
=============================
HOX2a_HOX2a
--
RAV1(1)
---------->
DOF2
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
<---------
CCA1(2)
atcgagagaaaaagggaaagcctctaacgaataaggagaagaagaggattggaaatagggtttaggacgactaggactcttcattttcttcatagatctt
13975700
--------->
ALFIN1
------->
PIF5
<-------
PIF5
<---------
O2
=================================
bZIP_DOF
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
bZIP60(2)
--------->
O2
--------->
TGA1a
<-------
<---------
TGA1a
<---------
KAN4(2)
=========
==========================
HOX2a_HOX2a
---------->
DOF2
<--------
==========================
HOX2a_HOX2a
<---------
ANAC58
========================
>
ARR11(3)
---------->
DOF2
<---------
ANAC58
<-----------
HVH21
<---------
ANAC58
-
AGP1
------>
ZmHOX2a(1)
--------->
ANAC55(2)
------>
ZmHOX2a(1)
<---------
ANAC58
>
AGP1
<---------
HSFC1(2)
--------->
YAB1
<---------
ALFIN1
<----------
DOF2
-
ARR11(3)
--------->
HSFC1(2)
--------->
ICU4
<----------
DOF2
<---------
At4g35610
==============
>
ARR14(2)
--------->
HSFB2a(1)
<-----------
GT1
<---------
ARR11(3)
<---------
ICU4
-
ARR14(2)
<---------
HSFB2a(1)
--------->
YAB1
<---------
DAG2
--------->
ARR11(3)
<-------
TEIL
ggggacgtggaagaagcttctcctccaaaagaatgatcaacatttttacctttcgtaatacaaagatttagctcctcgtcaaagtccat
ctttgcttcac
13975800
--------->
At4g35610
<---------
At4g35610
----------->
HVH21
--------->
ALFIN1
--------->
TGA1a
<---------
O2
<---------
TGA1a
<---------
ANAC58
<---------
bZIP60(2)
---------->
DOF2
<---------
ARR14(2)
===============
bZIP_DOF
--------->
TOE2(3)
<---------
ZAT14
--------->
TOE1(3)
--------->
ZAT14
--
ZAT14
<---------
ANAC58
<-------
====================
bZIP_DOF
<-------
--
DOF2
--------->
O2
--------->
ARR14(2)
<---------
ZAT2
<---------
ICU4
====================
bZIP_DOF
<------
ZmHOX2a(1)
----------->
GT1
====================
bZIP_DOF
----------------->
AGL1
--------->
GLK1(2)
<------
ZmHOX2a(1)
<-------
tgatgccttaaagacgtggcagttcacgatttgccaaaacagagagcaatggaagaatttgagaggagagagctaggaaaacagagaaaattatgtcttg
13975900
<---------
AHL20(2)
*
TSS
--------->
AHL20(2)
<---------
YAB1
<---------
RVE1(1)
<-
<-----------------
AG
<---------
CCA1(1)
<---------
ARR11(3)
<-----------------
AGL1
--------->
ARR11(3)
--------->
ARR11(3)
---------->
ID1
--------->
CCA1(2)
<---------
ARR11(3)
<---------
GLK1(2)
--
ANAC58
<------
MYB83
--------->
ANAC58
------->
GAMYB
------
--
ANAC46
<------
MYB46(1)
<-----------
TBP
--------->
ICU4
--------->
ANAC46
<-----
--
ANAC58
--------->
MYB59
<---------
REM1(2)
--------->
ANAC58
<---------
AHL20(2)
--------
ttttgttcttattt
ggtaagagagagacgactctacatgggtttatatatgagggcaagaattagatatttatttttttcaacgaaagattttgctaacc
13976000
--------->
KAN4(2)
--------------->
AtSPL8
<-------
GAMYB
---------
DOF2
<---------------
AGL15
<----------
DOF2
--->
MYB46(3)
<----------
DOF2
<---------
ANAC58
---
-------
MYB.PH3(1)
<---------
ARR11(3)
<---------
ANAC58
------
->
MYB52(1)
<---------
AtLEC2
--------->
ARR11(3)
<----------
DOF2
--------->
ATHB12
-
gcttttgtaatttgtatgtcccatctatctattgacgactattcaaaactatctttttggggttattcctttgcttttactccaattcattggccaataa
13976100
<---------
ANAC55(2)
<---------
ANAC58
<---------
ANAC58
--------->
ARR14(2)
<---------
ARR14(2)
--------->
SPL7
--------->
SPL1(1)
<---------
SPL1(1)
<---------
SPL7
<---------
SPL1(2)
<---------
ANAC58
<---------
DEAR3(2)
<---------
ANAC58
--------------->
AtSPL3
<-------
TEIL
------------------>
SPL14
<---------
TOE2(3)
<---------
DOF5.7(2)
------->
DOF2
--------->
ANAC46
--------->
DOF5.7(2)
--->
YAB1
--------->
ARR11(3)
------->
GAMYB
--------->
TOE1(3)
<---------
O2
---------->
GT1
<---------
ARR11(3)
---------->
DOF2
--------->
TOE2(3)
--------->
ANAC55(2)
gaaagttaagaaaatgagcatttgaaaaatagagagatattgacacataaaaacacaacgcgcagagatgaaaacattaacgtccgtacgaatacgtggc
13976200
<-------
<---------
bZIP60(1)
<---------
ALFIN1
----------->
GT1
--------->
REM1(1)
--------------->
AGL15
--------->
bZIP60(1)
<---------------
AGL15
<------
NtERF2
<---------
DAG2
<---------
ATERF1(1)
------>
ZmHOX2a(1)
--------->
DAG2
--------->
YAB1
--------->
TOE2(3)
---------->
DOF2
--------->
ATHB12
<----------
DOF2
--------->
SPL7
--------->
At5g28300
--------->
TOE1(3)
<---------
ANAC58
<---------
DEAR3(1)
<---------
ARR14(2)
<----------
DOF2
------>
NtERF2
<---------
ORA47(1)
<---------
CCA1(2)
<---------
AHL20(2)
<---------
AHL20(2)
------>
NtERF2
<---------
MYB52(1)
<-------
TEIL
--------->
ARR14(2)
<-----------
GT1
<---------
ANAC58
-
attctctgtttttttggacggtgaaggcattcattagttcatatccttcaactttatttagttattttccaagctttaattttcgtaaggcgacaccact
13976300
<-
<--
<---------
TOE2(3)
<------
MYB46(1)
---------->
DOF2
<------
MYB83
<
----------->
GT1
--------->
At5g28300
--------->
AtLEC2
--------->
AHL20(2)
<-----
--
ALFIN1
--------->
CCA1(2)
--------->
AHL20(2)
<----------
ID1
<---------
AtMYB61
--------->
DOF2
----------->
GT1
<---------
AHL20(2)
----------->
GT1
<-----------
RAV1(1)
tacaaagttaaaagataagattagactgtaaaaaacatctataatttaagaggtttatgcaaattgaatggagacaaaaaaaaatgatgttggtgtaatg
13976400
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AGI:
At4g28140.1
Description:
AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF054 (ERF054) [Arabidopsis Thaliana] (GB:Q9M0J3); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT2G20880.1); similar to RAP2-like protein [Populus trichocarpa] (GB:ABQ62985.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:
from: 13974697
to: 13975914
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.