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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
--------->
TOE2(3)
<-----------
GT1
<---------
DAG2
--------->
DEAR3(1)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
YAB1
<<<<<
<---------
ALFIN1
<---------
AHL20(2)
--------->
ANAC46
<----------
DOF2
<-------
-
GT1
--------->
ANAC58
--------->
MYB52(1)
<-------
TEIL
<----------
DOF2
<-----------
GT1
cattcgcaccgcatgttacaaattaaacggacatcgaaaactactacatacatactcaaccttttttataaacttttatagccattttttgccaatttat
13608900
<---------
YAB1
--------->
LBD16
--------->
ZAT6
--------->
O2
----------->
GT1
<---------
ANAC46
--------->
ANAC55(2)
<---------
TOE2(3)
--------->
ZAT18
<---------
ANAC55(2)
<---------
YAB1
<---------
ZAT18
<---------
TOE2(3)
<-----------
GT1
<---------
ANAC58
<<<<
GATA-1
--------->
ANAC55(2)
<---------
ANAC46
--
AHL20(2)
--------->
AHL20(2)
<---------
ANAC58
ctataacgtaatactatgcattccctcatttacatattttttaacattgttcaaagggttgtgtgccccgtgttaatatagagtcattttctaacatcta
13609000
<---------
WOX13(1)
--------->
ATHB12
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ANAC46
--------->
YAB1
------>
MYB46(1)
--------->
ANAC58
------>
MYB83
<---------
At4g35610
------>
MYB83
--------->
ANAC58
------>
MYB46(1)
--------->
At4g35610
<-----------
GT1
<---------
WOX13(1)
<---------
AHL20(2)
caattcagattaagctcccaaacatatgttccaattgcaatataccaccaaattaaaagattgactctcacataccccattaattgaaaccaaatgaaca
13609100
--------->
TGA2(2)
<-----------
TGA1
<-----------
HVH21
--------->
TGA1a
<---------
TGA1a
--------->
bZIP60(2)
<---------
O2
--------->
O2
<---------
bZIP60(1)
--------->
ALFIN1
--------->
bZIP60(1)
----------------------
--------->
ANAC58
--------->
SPL7
--------->
ANAC55(1)
--------->
ALFIN1
--------->
ANAC55(2)
<------
NtERF2
<---------
ANAC55(2)
--------->
LBD16
====
--------->
ANAC46
<---------
ARR14(2)
<---
--------->
ANAC58
----------->
HVH21
----
<---------
RVE1(1)
--------->
ANAC55(1)
<---------
LBD16
----
<---------
CCA1(1)
--------->
ANAC55(2)
<---------
ANAC46
<---
<---------
ARR11(3)
--------->
ANAC46
--------->
ARR14(2)
<-------------
--------->
AHL20(1)
<---------
ANAC55(2)
--------->
ATERF1(1)
<---
--------->
ARR11(3)
----------->
HVH21
<------
NtERF2
<---------
MYB52(1)
<---------
AHL20(1)
<---------
ARR11(3)
--------->
LBD16
<---------
MYB46(3)
--------->
YAB1
<-----------
HVH21
------>
ZmHOX2a(2)
<---------
LBD16
<---------
DEAR3(1)
<
<-------
TEIL
<---------
TOE2(3)
--------->
ARR11(3)
--------->
AtLEC2
--------->
ALFIN1
<-------
aaaacgttcataagatattaagatgtcacgtcagaacatgatctacaaatgacacataacatgcagacgcggagacgcggagggccggtgttgttcgtca
13609200
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
AtLEC2
--------->
ARR11(3)
<-------
TEIL
--------->
ANAC58
<---------
ARR14(3)
------->
MYC3
------>
ZmHOX2a(2)
--------->
ARR14(3)
<-------
MYC2
----------->
HVH21
--------->
AGP1
<-------
MYC3
<-------
MYC3
<---------
ARR14(2)
------->
MYC2
<-------
MYC2
------->
GAMYB
--------->
ANAC46
------->
MYC2
<---------
MYB111(2)
--------->
TGA1a
------->
MYC3
<-----------
GT1
--------->
ANAC46
------>
ZmHOX2a(2)
--------->
O2
--------->
TGA1a
->
TaNAC69(2)
------>
MYB46(1)
--------->
TOE2(2)
----------->
HVH21
--------->
ANAC46
=======================================
MYC_MYB
========================================
------
TGA1a
------>
MYB83
=======================================
MYC_MYB
<---------
O2
----->
ANAC55(2)
<---------
MYB111(1)
<-----------
ARR10
--------->
ANAC58
<---------
TGA1a
----->
O2
<---------
MYB59
--------->
TOE2(3)
--------->
bZIP60(2)
--------->
O2
---------
------
O2
<---------
ANAC55(2)
--------->
ARR14(2)
--------->
ANAC58
=====================
--
AtSPL3
--------->
ANAC55(2)
<---------
ARR11(3)
--------->
ANAC46
--------->
ANAC58
------
ANAC55(2)
--------->
ANAC55(1)
----------->
ARR10
<---------
ALFIN1
--------->
ANAC58
-----------
HVH21
--------->
ANAC46
--------->
TOE1(2)
--------->
ANAC58
<---------
ANAC55(2)
----
HVH21
<---------
ALFIN1
--------->
MYB46(3)
--------->
ANAC58
--------->
ANAC55(2)
cttgtcactctcttccaacacctaatccagacaacaacctaagatcttcactctcgcacacacacgacacatgcattcttacacgtgatcgccatgcaat
13609300
--------->
ZAT14
<---------
ZAT18
*
TSS
<----------
DOF2
<---------
MYB52(2)
--------->
ZAT14
--------->
YAB1
===========
bZIP_DOF
<---------
ZAT14
--------->
AtMYB61
--->
CBF
----------->
TBP
--------->
ANAC46
>>>>>>>>>>
MYB80
------
===========
bZIP_DOF
--------->
ZAT6
<----------
DOF2
<---------
ICU4
----------->
GT1
ctcctttctcacctataaaactaactcttcacttcactctttactc
aaaccaaaactcatcatcacaaacgagtaagaatacaaacacaaatagcaaaaa
13609400
--------->
ZAT14
-
<-----------
RAV1(1)
--
--------->
At4g35610
------>
MYB83
<---------
ZAT14
<-
<---------
LBD16
------>
MYB46(1)
--------->
ZAT14
--
--------->
ARR11(3)
--------->
AtMYB61
<---------
ZAT18
--
<---------
ARR11(3)
<----------
DOF2
--------->
DEAR3(1)
<---------
ALFIN1
--
--------->
ANAC58
--------->
LBD16
--------->
MYB46(3)
--------->
ZAT18
--
--------->
ANAC58
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
ANAC46
<---
--------->
ANAC58
--------->
ZAT18
------>
ZmHOX2a(1)
<---------
At5g28300
-----
--------->
ANAC58
<---------
DEAR3(1)
<---------
At4g35610
-------->
P
-------
--->
AHL20(2)
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
MYB46(3)
<------
a
atggcaaacaagctcttcctcgtctgcgcaactttcgccctctgcttcctcctcaccaacgcttccatctaccgcactgttgtcgagttcgacgaagat
13609500
------->
GAMYB
-------->
P
--------->
MYB46(3)
--------->
AtMYB61
<------
NtERF2
--------->
ZAT2
--------->
At4g35610
<---------
ZAT2
<---------
At4g35610
------>
NtERF2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
----->
NtERF2
------->
ANAC46
<---------
ARR11(3)
--------
bZIP60(1)
--------->
ARR11(3)
------->
ANAC58
--------->
TOE1(2)
------->
TGA2(1)
--------->
ANAC58
------->
bZIP60(1)
--------->
ANAC46
------->
ANAC58
--------->
YAB1
--------->
HSFB2a(2)
------
TGA2(2)
--------->
ANAC46
<---------
ATHB12
<---------
HSFB2a(2)
------>
TGA1
--------->
ANAC58
<---------
At4g35610
<---------
ANAC58
-->
At4g35610
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
ANAC58
--------->
ANAC58
---
At4g35610
<---------
PCF2
<-----------
HVH21
--------->
WOX13(1)
<---------
ANAC58
--------->
ANAC58
gacgccagcaaccccatgggcccaagacagaaatgtcagaaggagtttcagcaatcacagcacctaagagcttgccagaaattgatgcgcatgcaaatga
13609600
--------->
TCP16(1)
--------->
PCF5
<---------
PCF2
<---
--------->
PCF2
----
<---------
MYB46(3)
<---
<---------
AtMYB61
-----
--------->
ALFIN1
--------->
ARR14(3)
<---------
MYB46(3)
--------->
ARR11(3)
--------->
ALFIN1
--------->
ARR14(2)
<---------
DEAR3(1)
<-----------
RAV1(2)
------>
ZmHOX2a(1)
<---------
AtMYB61
<------
NtERF2
<---------
ARR14(3)
<---------
AtMYB61
<------
NtERF2
<---------
ARR11(3)
--------->
ALFIN1
--------->
ANAC46
--------->
AGP1
<---------
ANAC46
--------->
HSFB2a(2)
<---------
ZAT2
------>
ZmHOX2a(2)
<---------
ANAC58
<---------
HSFB2a(2)
--------->
ZAT2
<------
ZmHOX2a(2)
<---------
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
ARR14(2)
--------->
ANAC58
----------->
HVH21
--------->
ANAC58
---------->
DOF2
----------->
ARR10
ggcaaggccgtggtggtggtccctccctcgacgatgagttcgatttggaagacgacatcgagaacccacaaggcccccagcagggacaccagatcctcca
13609700
<---------
ZAT18
<---------
MYB52(1)
<---------
At4g35610
--------->
DOF5.7(2)
<
<---------
ZAT14
<-------
GAMYB
<-
<---------
At4g35610
<---------
MYB46(3)
--
--------->
At4g35610
<---------
ZAT2
<-----
--------->
ZAT14
<---------
At4g35610
<---------
ANAC55(2)
--------->
At4g35610
--------->
At4g35610
--------->
ANAC58
--------->
ALFIN1
--------->
ZAT2
--------->
ANAC46
------
At4g35610
<------
ZmHOX2a(1)
--------->
ANAC58
--------->
ANAC58
----->
ZAT2
--------->
ZAT2
------>
NtERF2
------>
NtERF2
--------->
ANAC55(1)
------
ZAT2
<---------
ZAT2
<---------
ALFIN1
<-----------
HVH21
<---------
REM1(2)
------>
RAV1(1)
<-----------
RAV1(2)
--------->
PCF2
--------->
ANAC58
--------->
LBD16
------
gcagtgctgcagcgagcttcgccaggaagagccagtttgtgtttgccccaccttgagacaagctgccagggccgttagcctccagggacaacacggacca
13609800
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AGI:
At4g27150.1
Description:
2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2. Identical to 2S seed storage protein 2 precursor (AT2S2) [Arabidopsis Thaliana] (GB:P15458); similar to AT2S3, lipid binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT4G27160.1); similar to Napin-B precursor (1.7S seed storage protein) [Contains: Napin-B small chain; Napin-B large chain] (GB:P27740); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771); contains InterPro domain Napin/ Bra allergen; (
Range:
from: 13609347
to: 13610081
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.