Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------LBD16                              <---------LBD16                             ===============HOX2a_HOX2a                        <-----------bZIP910(2)                      <-----------TGA1                     --------->TGA2(1)                     ===============================================MYC_MYB                     --------->bZIP60(1)                     <---------TGA2(1)                     <---------bZIP60(2)                     --------->TGA1a                     --------->bZIP60(2)                     <---------bZIP60(1)                     >>>>>>>>>>HY5                     --------->ANAC55(2)                     <---------TGA1a               --------->WRKY38(1)                     --------->O2  <---------ARR14(3)                     <---------O2  --------->ARR14(2)                   <---------TGA2(2)               <---------ETT(2)         <------MYB83                  ----------->HVH21<---------ARR11(3)                       <------MYB46(1)   <---------ARR11(1)--------->ANAC58              ----------->HVH21       <------MYB83   ------->TEIL   ----------->TGA1 <---------ARR14(2)             --------->O2   --------->GLK1(2) <---------ANAC55(2)           --------->ETT(2)        --------->MYB59   <-----------ARR10<-----------STF1        --------->ARR14(2)    ================MYC_MYB   <---------ARR14(2)<---------ANAC46       <---------ARR14(2)    <---------TGA1a   --------->ARR14(2)--------->ANAC58------>ZmHOX2a(2)       --------->MYB52(2)  <---------ARR14(1)----------->STF1<------ZmHOX2a(2)      <---------MYB52(1) -----ZAT2      <---------ANAC58   --------->ARR14(3)      =================MYC_MYB                -- -----GLK1(1)<------MYB83    ========================HOX2a_HOX2a  <---------O2                     <- ---->GLK1(1)<------MYB46(1) ==============HOX2a_HOX2a   --------->LBD16   <---------MYB46(3)  ------ ---->At4g35610 <---------MYB46(3) --------->ARR11(3)  <---------LBD16     <------MYB46(1)  <-------- -----At4g35610 <---------ANAC58--------->LBD16    <---------WRKY38(1)    --------->ALFIN1  --------- ---->ZAT2  --------->MYB59  ------>ZmHOX2a(1)------>ZmHOX2a(2)   --------->TGA1a          --------->ANAC58 -REM1(1)  <-------TEIL--------->TGA2(2)  --------->ETT(2) <--------P    <--------P        --------->ANAC58   ctccgaatctaggttcggtcgtgacgtcatcctccgggatcttgtcgatcgggtcgacccggttagtctcgtcgggttgggtcatgagctcgtaagcagc  13240900                                                                                                -----                                                                                             <-------                                                                                        <--------P                                                                                   <-------TEIL <----                                                                                 <---------PCF2------                                                                                <------MYB46(1)------                                                                                <---------DEAR3(2)                                                                                <------MYB83 --------                                                                               <---------MYB46(3)   <      ------>ZmHOX2a(1)                                                       --------->ALFIN1<------ZmHOX2a(2) ------->ARR14(2)                                                           --------->ZAT2--------->MYB59 --------ARR14(2)                                                          --------->ALFIN1 <------ZmHOX2a(1) --->At4g35610       <---------ANAC46                 <-----------GT1     <------ZmHOX2a(1) ========= -At4g35610        <---------ANAC46                  ----------->HVH21    ===========================HOX2a_HOX2a >At4g35610     <-----------RAV1(1)            <---------WOX13(1)         ===========================   gtaatctccttcagaattgtgttgtgggaacttgaagtaaggcatgttgatggatttgacccgttgcaagagagaaggaggtgggttcgggttaggatcc  13241000                    --------->GLK1(2)                   <---------ARR14(2)                   <---------GLK1(2)            --------->ARR14(2)            <---------ARR14(2)      --------->ALFIN1  --------->LBD16  --------->ARR14(2) ------>HVH21 ------>ZmHOX2a(2) --ARR14(2) --------->ARR11(3) -----ETT(1)<---------ARR11(3) --->DEAR3(2) ========================HOX2a_HOX2a                                               <---- >ZmHOX2a(2)<---------AGP1<---------REM1(1)                  --------->ZAT14                    <---- ->ARR14(2)<---------CCA1(2)                                 <---------ZAT14                 -------- ---------LBD16<---------LBD16                              <----------DOF2          --------->ARR14(2) ====================HOX2a_HOX2a                          ------->TEIL               <---------ARR14(2) =HOX2a_HOX2a<---------GLK1(1) <------ZmHOX2a(1)       <---------WOX13(1)         <------ZmHOX2a(1)   gacccggagtagtggatctcggattctggtgaaggagaattgtacagatggaagttgatggactttactctgtctatgagcgaaggaggtctgccaaacc  13241100                                 ------->GAMYB                            --------->LBD16                           --------->ANAC58                                    <------MYB46(1)                           --------->ANAC55(2)                                 <------MYB83                           --------->ANAC46             <-----------------AGL1<---------MYB46(3)    =                           --------->ANAC55(1)<---------ANAC58                <---------AtMYB61     =                           <---------ANAC55(2)<-------GAMYB                   --------->MYB55(2)    -                           --------->ANAC58   <---------ANAC46                --------->MYB111(2)   -                      --------->DEAR3(1)      <---------ANAC58                <---------DEAR3(1)    =                      ----------->HVH21      <------MYB83<---------------AGL15--------->MYB46(2)   <-                      --------->MYB46(3)     <------MYB46(1)                 <---------MYB55(1)    ==                     --------->SPL7          --------->MYB55(2)              <--------P            ==                   ----------->HVH21         <---------MYB46(3)             <---------MYB52(1)  <---- <-----------------AGL1------>NtERF2         --------->MYB52(2)         ------->TEIL            <---- -----ANAC58      --------->DEAR3(2)        <---------AtMYB61     --------->ARR14(2)           <----- -----ANAC58      --------->MYB46(3)     <-----------RAV1(1)     <------ZmHOX2a(1)           <------- ->MYB52(1)   ----------->HVH21 --------->MYB46(3)<---------ANAC46<---------ARR14(2)<---------YAB1 ==   gtgcctgattttggtcatgacccgacgacccgtaaccatcttgatgttggttgtgttttcttgaacaggaactgaaccggttggtgatgaaaatggtggc  13241200 ========================HOX2a_HOX2a =====================HOX2a_HOX2a ---------->GT1 ----->ZmHOX2a(2)                                                                            <------- ==================HOX2a_HOX2a                                                              *TSS -----ZmHOX2a(2)  <------ZmHOX2a(1)                                                       <---------ANAC46 ==================HOX2a_HOX2a                 --------->WRKY18(1)                        <---------ZAT6 =====================HOX2a_HOX2a            <------MYB46(1)                         <---------ANAC58 -----ANAC58   <------ZmHOX2a(1)           <---------MYB52(1)                   <---------ANAC58 -----ANAC58 --------->ALFIN1   <------NtERF2<------MYB83       >>>>>>>>>>>>>>>>>LFY <---------ANAC46 -NtERF2  <---------TOE2(3)   <---------DEAR3(1)    <---------ANAC58            <---------ANAC58 --DEAR3(1) <------ZmHOX2a(1)<------NtERF2 <--------P         --------->At4g35610    <---------ANAC58 ========================HOX2a_HOX2a <-----------GT1<---------ANAC58            <---------ANAC46   gatcgtgaaattgaggaggaggaagagagtcgtcggagttaaccagttggtcaagcttgtgagtagctccattgttgtttttgtgtgtcgtagagtgaag  13241300                                                     --------->YAB1                                                     <---------ICU4                                                   <---------YAB1                                                  --------->TOE2(3)                                                 <--------HAHB4                                                 <---------ICU4                             <---------RVE1(1)   --------->YAB1                  <---------AHL20(2)             --------->ATHB12                  --------->AHL20(2)   <---------ANAC58             ----------->ARR10                <-----------TBP        <---------ANAC58           <---------MYB52(1)               <---------ICU4<---------CCA1(1)  --------->ICU4  <---------ANAC58              --------->ICU4<---------ARR11(3)  <---------ATHB12<---------ANAC46          ---------->ID1 --ZAT14----------->GT1     --------->ARR11(3)  <---------YAB1  <---------ANAC58      <----------DOF2   aatgaagtagtggataatatttatattagagatattttttgtcttggttaatcattaatgacccttgcgttagatttgttgtatgggtctttgttttttt  13241400                                                                                                  ---                                                                                              <------                                                                                              -------                                                                                             --------                                                                                        ----------->GT1                                   --------->ATHB12                                     --------->ANAC55(2)                                  <---------YAB1               <-----------GT1          --------->ANAC46                         <----------DOF2                     --------->AHL20(2)        <---------TOE1(3)              <-----------GT1   --------->YAB1   ---------->DOF2 --------->ZAT6        <---------TOE2(3)    ----------->GT1    ---------->ID1<---------WOX13(1)      <---------AHL20(2)<---------AtMYB61<----   ttcatatggttttatttatcaatttgtctttctatattgattgttttctaacaaagtcagaaattaaacagtacatatgttttggtcttaacgtaattat  13241500                                                         <------ZmHOX2a(2)                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                      ----------->ARR10                                               <---------ZAT14 --------->AHL20(2)                            --------->ZAT14 -------->GT1                                  --------->REM1(2) ---ICU4                                      <---------ANAC46                              --------- -->YAB1                                  <---------ANAC58                   --------->REM1(1) ->ICU4             <---------AtMYB61     <---------ANAC58                  <-------TEIL    --------- -----YAB1 ------>ZmHOX2a(1)              <---------ANAC46              ----------->GT1----------->HVH21   cagttaaatagtccttgtagttgtggttttgtttagtatttgtgacttgtgtagagaagatcatccatttgaaatagttacatctatttctgacaggcta  13241600                                                        ----------->HVH21                                                       --------->LBD16                                                      <---------O2                    --------->ATHB12                  --------->O2                            =======               <-----------GT1                        --------->ANAC46              <---------ICU4           --------->ATHB12                         ------->GAMYB                   --------->YAB1           --------->ATHB51        --------->AHL20(2)<---------LBD16             <---------ICU4 >ANAC58  <---------YAB1      <---------TOE2(3)  <-----------GT1                 --------->YAB1    -- >ANAC58 --------->TOE2(3) --------->MYB46(3)  <---------AHL20(2)               --------->ICU4-------   caaaactcttacattattgacctcattgaaccaaggtttaaatctgtattttaaccccgtgactctattgtctcatcggctcataatcatcttcttccct  13241700            <----------DOF2  ----------->RAV1(1)  <---------ALFIN1 --------->ZAT18 --------->RAP2.3(3) <---------------AtSPL8 <---------ZAT18     <---------------AtSPL3                                       <----------DOF2 <-- =============RAV    --------------->AtSPL3    <---------ANAC58              <---------ANAC58     --- ------->PCF2   --------->YAB1                 <---------ANAC58              <---------ANAC58<------- ---->RAV1(2)  <---------YAB1        --------->YAB1   <----------DOF2   --------->YAB1  --------->TOE2(3)   gagcccacatttttcttttgataatcgtacagttttctaacatcacattccttgagctttttattctatttcaaaaatagcttacttttacataaatcat  13241800  Previous    Next  AGI:  At4g26130.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72576.1) Range:  from: 13239988    to: 13241292    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.