Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <----------DOF2                                                                            <---------ALFIN1                                                                       --------->ARR14(2)                                                                       <-----------ARR10                                                                      ------>MYB83                                                                      ------>MYB46(1)       ---------                                                                    <---------MYB111(1) <----------DOF2                                                     <---------AHL20(1)<---------ARR14(2)   ---------                  ---------->DOF2      <----------DOF2      <---------At4g35610<---------DAG2      --          <----------DOF2         <-----------GT1    --------->ARR11(3)<---------ARR11(1)   <--------          <---------DAG2         <-----------GT1  --------->AHL20(2)<---------MYB59  <-----------GT1   gaaaattccatacttttttaaaaagacaatttgttttatcactttagtttttttatatattcagcgtctaccaaatctacacttttttttctttctcgat  13038000                                                                                                   <-                                                                                                  <--                      <---------ANAC55(2)                                                         <--                      --------->ANAC55(2)              <---------AHL20(2)                         --- ------>AGL15       <---------ANAC46               <---------CCA1(1)                     <------MYB46(1) >HSFB2a(2)  <---------ANAC58                      <---------RVE1(1)                     <------MYB83 --------->GT1    <-----------HVH21               <---------ARR11(3)                     <---------MYB46(3) -------AGL15<---------ANAC58     <---------YAB1  --------->ARR11(3)                     ----------->GT1   ttagttaatcttcgttcttgtgtcatgtaatagattactatttcaaaacatagatatttagttatctaaataaaactaggccatccatggatggtttcaa  13038100                                                      <---------------AGL15                                                      --------------->AGL15                                                     ----------------->AGL3                                                     <-----------------AGL3                                                     ----------------->AGL2             ---------->DOF2                    --------->YAB1                            <---------ANAC58           <---------YAB1                       --------->ATHB12                    <---------ZAT6 --------AHL20(2)    ----------->GT1        --------->ATHB12             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) -------AHL20(1)    ----------->GT1        <---------YAB1            --------->GLK1(2)    <---------ANAC58 -------AHL20(2)   --------->DAG2        --------->YAB1         ---------->DOF2   <---------ANAC46<-- ------>AHL20(2)  ---------->DOF2  <-----------GT1   <-----------------AGL2  <---------ANAC46     <--   ttttttttttcatatgaaagaaaagttaaatttcatttcacaataaccattgattactaaatttagtaaagaatcaattgggtttagtgtttacttgttt  13038200                                                                                            <xxxxxxxx                                                                                 --------->GLK1(2)                                                                             --------->HSFB2a(2)                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <------                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)      <---------HSFB2a(2)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ANAC46<xxxxxxxxxxx                      <---------TOE1(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------GLK1(2)              <----------DOF2  --------->YAB1  --------->CCA1(2)     <----------DOF2   <---------CCA1(2)           <-----------GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  < -------TOE2(3)       <---------TOE2(3) ---------->DOF2<---------ATERF1(1)  <---------ETT(2)<xxxxxxxx -------TOE1(3)       <---------YAB1  <---------YAB1   <------NtERF2<xxxxxxxxxxxxxxxxsmallRNA(i)    <   aaggttttttttttttcttttgttatggttctatactaatatcaaagagttatgggccgaagcccatacatctttccgtcgagaatctcatatattcttt  13038300                                                                     *TSS--------->STY1(1)                         <---------GLK1(2)                           ------>NtERF2  <---------ANAC58                      <---------HSFB2a(2)                            --------->At4g35610                      --------->HSFB2a(2)                           --------->RAP2.3(2)                     <---------ETT(2)                              <------NtERF2    <---------ANAC58                  <---------ANAC46                                 --------->ATERF1(1)              <----------DOF2                                      --------->RAP2.3(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        --------->DEAR4(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->ORA47(2)    --------->ANAC46 xxxxxxxxxxxxxxxsmallRNA(le3)          <---------DAG2             <---------RAP2.3(1)<----------DOF2 ----DOF2    <xxxxxxxxxxxxxxxxsmallRNA(i)                         <---------ATERF1(1)<---------DAG2 xxxxxxxxxxxxsmallRNA(si3)--------->GLK1(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->TOE1(3)  --------->TOE1(2)       <-----------GT1 xxxxxxxxxxxxxxxsmallRNA(si3)          --------->TOE2(3) --------->YAB1<----------DOF2   <xxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<-----------GT1     <-------TEIL--------->DEAR3(1)  ---------->ID1   atcgaagcccatacatctttccgtcgagaatctcatatataccttatcccattcaacattcatacgagcgccgctctagggtttttgcttttcgccattg  13038400                                    --------->ANAC58                                    --------->ANAC46                                    --------->ANAC58                                   <---------ZAT18                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                            <----------DOF2                           <---------ANAC46                     <---------TOE1(3)    --------->TOE2(3)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------AHL20(2)               <---------MYB46(3)<---------At4g35610<---------YAB1              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------AHL20(2)               xxxxxxxxxxxxxxxx>smallRNA(fl3)             <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                xxxxxxxxxxxxxxxxxxx             <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                xxxxxxxxxxxxxxxxxxx             <-------GAMYB <---------ANAC58      <---------YAB1                 <xxxxxxxxxxxxxxxxxxxx            <------MYB46(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <------MYB83   <---------ANAC58      <---------AHL20(2)        xxxxxxxxxxxxxxxx>smallRNA(i)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------AHL20(1)      <---------YAB1        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->YAB1            <---------TOE1(2)   <---------ARR14(2)       <----------DOF2  <--------P --------->ZAT18 <---------AHL20(1) <-----------GT1      --------->ARR14(2) xxxxxsmallRNA(i)    <---------TOE2(3)    <----------DOF2      <-----------GT1<-----------GT1      --   gtccaagtgctatttggttgtttaaggttgcttttagcacacaactttaatattatttttatgtttttcttcttacgatttatcgatttgtgggatactg  13038500                                              ------>NtERF2                                             --------->DEAR3(1)                                             --------->RAP2.3(2)                                            <------NtERF2                                            --------->DEAR4(2)                                            --------->ATERF1(1)                                            --------->ORA47(2)                                            --------->RAP2.3(1)                                           ------>NtERF2                                           <---------RRTF1(1)                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    --------->ARR14(2)                                    <---------ARR14(3)                                    <---------ARR11(3)                                          <----         <---------YAB1             <---------ARR14(2)                                <---------TOE2(3)      <---------YAB1                --------->ARR11(3)                            <---------DAG2<----     <---------GLK1(2)              <---------AGP1                          <---------ALFIN1   <-----  --------->YAB1                    <-----------ARR10                      <---------ABI4(2)   <----- xxx>smallRNA(i2)                   --------->ARR14(3)               --------->TOE1(2)<---------TOE1(3) xxxx>smallRNA(i2)                  --------->AGP1<----------DOF2   --------->YAB1<----------DOF2 xxxsmallRNA(fl3)      --------->ANAC46    <---------RAP2.3(1)     <-------TEIL--------->DEAR3(1) ------->WOX13(1)  <-----------GT1 <---------CCA1(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<-------   acaatcagattattgttgttttttccagccaaatatcagatcttgcgccgctctttatcccattcaacattcatacgagcaccgctttacggtttttgct  13038600                                               --------->ANAC58                                               --------->ANAC46                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <----------DOF2                                      <---------ANAC58                                <---------TOE1(3)                                <---------TOE2(3)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          <---------MYB46(3)<---------At4g35610                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <---------AHL20(2)                        <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                        <-------GAMYB <---------ANAC46      <---------AHL20(2)                        <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                       <------MYB46(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------YAB1          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->TOE2(3)                        <xxxxxx <<<<<<<<<<<<<<<<<LFY  <------MYB83   <---------ANAC58     <---------AHL20(1)           <-----------GT1 -----DAG2xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->ANAC58<---------YAB1        xxxxxxxxxxxxxxxx ------DOF2        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->YAB1             <xxxxxxxxxxxxxxxxx ----ANAC58       <----------DOF2  <--------P --------->ZAT18 <---------AHL20(1)  <---------YAB1 ----ANAC58  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <----------DOF2             <---------TOE1(2) ----GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ZAT18 <---------AHL20(2)<-----------GT1     <   tttcgacattggtcgaagtgctatttggttgtttaaggttgcttttagcacacaactttaatattatttttatgttttcttcttacgatttatcgatttg  13038700               <---------GLK1(2)            --------->YAB1         --------->WOX13(1) <---------ARR14(2)                                                                   --------->ARR14(2) --------->ARR14(2)                                  <-----------GT1                --------->LBD16 --------->ARR11(3)                              <---------AHL20(2)                --------->HSFB2a(2) xxxxxxxxxxxxxxxxsmallRNA(i2)                  <---------RVE1(1)         --------->ARR11(3) >smallRNA(i)  --------->ARR11(3)             <---------GLK1(2)         --------->ATHB12           -- xxxxxxsmallRNA(si3)  ---------->ID1          --------->ARR11(3)       --------->ICU4 <---------ARR14(2) ------ZmHOX2a(1)   <-----------RAV1(1)---------->DOF2               xxxxxxxxxxxxxxxxxx>smallRNA(fl3)   taggatactgacaatcagatttttgttgtttttttcagccaaaaatcagatttttttacattttgtttagagaatgattttggttcccgatttgtctgtt  13038800                                                                                   <-------GAMYB                                                                                  <---------MYB46(3)                                <---------ZAT6                                    --------->MYB52(2)            <---------------AtSPL8    --------->ZAT6                        <---------ANAC58           ---------->DOF2<---------AHL20(1)       <---------ARR14(2)       <---------ANAC58      <---------ANAC46    --------->ARR11(3)      --------->GLK1(1)<---------ARR11(3)   <----------DOF2        --------->AHL20(1)      <---------GLK1(1)--------->ARR11(3) -------->ID1     <----------DOF2   <-----------GT1--------->ARR14(2) <----------DOF2   tttcgcttatgtgtaaagtactttgaaaaatattgtgttaactctacaatgggtatcccaaatttttgagttcttttgtcttgttcgttgtcgagacact  13038900  Previous    Next  AGI:  At4g25530.1    Description:  FWA; DNA binding / transcription factor. Identical to Homeobox protein FWA (FWA) [Arabidopsis Thaliana] (GB:Q9FVI6;GB:O65608;GB:Q9M0K7); similar to HDG7 (HOMEODOMAIN GLABROUS7), DNA binding / sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G52170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61351.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Lipid-binding START (InterPro:IPR002913); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 13038369    to: 13042452    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.