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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
TOE2(3)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC55(1)
<---------
ANAC46
<---------
ANAC58
<---------------------
WRI1
<---------
ANAC58
<---------
ARR11(3)
-
<---------
AtLEC2
--------->
TOE2(3)
-
------->
TEIL
--------->
ANAC55(2)
<---------
MYB46(3)
<-------
<---------
AtLEC2
<-------
TEIL
--------->
ARR11(3)
--------->
AHL20(2)
<-------
<-------
TEIL
----------->
GT1
--------->
YAB1
<---------
AHL20(2)
--------->
YAB1
ctaaaatgcatgtattgcatgtaaaatacgtaaacataaatcttgagcgaattgaactaaaaaattggttgaaatttgaaactgagcaaataatagcgag
12998000
-----
<----
-----
--------->
ANAC58
--------->
At5g28300
<----
--------->
ANAC58
--------->
ARR14(2)
----------->
GT1
--------->
YAB1
-------->
ANAC58
<---------
ARR14(2)
<---------
ZAT2
<---------
YAB1
-------->
ANAC58
--------->
ANAC58
--------->
ZAT2
<---------
MYB52(2)
<-----
--
ANAC58
---------->
DOF2
<-------
MYC3
--------->
ANAC46
<-------
TEIL
--
ANAC58
------>
ZmHOX2a(1)
--------->
ANAC58
------->
MYC3
<----------
DOF2
<---------
MYB52(2)
----
acaagacaagtcctagtaaatgcaaagacatggaacctctgcattaaacatgtggccaagctgtaactttctaagctactaactcacgattcataagaat
12998100
--------->
YAB1
--------------->
AGL15
<---------
HSFB2a(2)
--------->
HSFB2a(2)
-
<---------------
AGL15
<
---->
HSFB2a(1)
--------->
TOE2(3)
<-
-----
HSFB2a(1)
--------->
TOE1(3)
--
---->
KAN4(1)
--------->
GLK1(2)
--------->
ARR11(3)
<---
-----
KAN4(1)
--------->
ARR11(3)
<---
----
KAN4(2)
<-----------
ARR10
<---------
ARR11(3)
<---
----->
KAN4(2)
<---------
ARR11(3)
---------->
DOF2
---------->
DOF2
attcttctagtaattgtaatccccaagagaaaatctagacaaccttaagttctctcttaatttgtaaagttcaaaaacttgaaaaccccaaagaaaatgg
12998200
--------->
YAB1
<------
MYB46(1)
<------
MYB83
<-----
<--------
P
<---------
ANAC58
<-------
GAMYB
<-----------
GT1
-------->
MYB55(2)
--------->
YAB1
<---------
AHL20(2)
---------
MYB46(3)
<---------
YAB1
--------->
AtLEC2
<-----
--------
AtMYB61
<---------
ARR11(3)
<---------
AHL20(2)
------->
ALFIN1
<---------
ANAC58
--------->
At4g35610
<---------
ANAC58
------
ANAC58
<---------
At4g35610
<---------
ANAC58
<---------
At4g35610
<---------
ANAC46
------
ANAC58
--------->
ZAT2
<---------
ANAC46
<---------
ICU4
--------->
AHL20(2)
------
ANAC46
----------->
GT1
---------->
DOF2
--------->
ARR11(3)
------->
TEIL
------
tgtggttggaatcatactgtaatactcaagctgtctgttttcaaagaaaatgcgtggctaaatatcatcatctcaccatgcatttatttacttgtagtac
12998300
--------->
ANAC55(2)
<---------
ANAC55(2)
<-----------
GT1
<---------
YAB1
--------->
YAB1
-------->
HAHB4
-------->
ATHB1
--------->
ATHB51
------>
MYB83
<---------
ICU4
------>
MYB46(1)
<--------
HAHB4
--------->
AtMYB61
-
--------->
AHL20(2)
--------->
DEAR3(1)
<
<---------
AHL20(2)
<---------
ALFIN1
<---
<----------
DOF2
<-----------
HVH21
--------->
MYB46(3)
<---------
YAB1
-------
<-----------
GT1
<---------
At5g28300
<-----------
HVH21
------------>
CBF
--------->
DAG2
-
----
ZAT14
<---------
ATHB51
--------->
AHL20(2)
--------->
At4g35610
---------->
DOF2
<
----
ZAT18
--------->
ICU4
<---------
AHL20(2)
--------->
ZAT2
*
TSS
<---------
ZAT6
-------
--->
ZAT14
<---------
YAB1
<---------
AHL20(2)
<---------
ZAT2
------------>
CBF
--------
agtttatctttttaattattactgtcacgttttaaaattattttctgtcaccaccctctgctcgattatc
aatgcaatatagagataaagttgcagtgct
12998400
<---------
MYB52(1)
-------->
ZAT2
<---------
ANAC46
---------
ZAT2
<---------
ANAC58
------
At4g35610
<----------
DOF2
--------->
ARR11(3)
-->
ZAT14
<---------
ANAC58
<---------
ARR11(3)
-------->
At4g35610
<------
ZmHOX2a(1)
<---------
ANAC58
<---------
GLK1(2)
---------
At4g35610
<-----------
RAV1(2)
---------->
ID1
---------->
DOF2
-->
At4g35610
<-----------
HVH21
<---------
AHL20(2)
<---------
ANAC58
->
ALFIN1
<---------
LBD16
--------->
AHL20(2)
<-----------
RAV1(1)
<--
gcagcttccgatagctctctcgggtcaggaaccaaaaacataaaatttcaaatttggcttttttgctggtgcaaaaaaagattttgttcttcaacctctt
12998500
<---------------
AGL15
==============================
<-----------------
AG
<-----------------
AGL1
--------->
TOE2(3)
--------->
MYB52(1)
<-----------
GT1
<---------
YAB1
--------------->
AGL15
-----------
<-----------
HVH21
<---------
ALFIN1
--------->
ANAC46
<---------------
AGL15
<-----------
<----------
DOF2
---------->
ID1
--------->
AHL20(2)
===================================
--------
DOF2
<-----------
GT1
--------->
ICU4
<----------
DOF2
--------->
ALFIN1
ctttcttcttttgtcagtccatttttcgccttccacttgtcaatattatacgttagagacaggcttttctcttaacagaa
atgggaagagagtggtacaa
12998600
<---------------
AGL15
--------------->
AGL15
<---------
ALFIN1
--------->
CCA1(2)
===================
HOX2a_HOX2a
<---------
ZAT18
<------
ZmHOX2a(2)
<---------
ZAT14
<---------
ARR14(2)
--------->
ZAT14
<---------
ARR11(3)
--------->
ANAC58
<-----------
TGA1
--------->
ARR11(3)
--------->
ANAC58
--------->
bZIP60(2)
--------->
ARR14(2)
--------->
ANAC46
<---------
ANAC58
<-----------
GT1
----------->
ARR10
--------->
ANAC58
<------
NtERF2
<-----------
GT1
=
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
RAP2.3(3)
<----------
DOF2
<
=================================
MADS_MADS
--------->
MYB52(1)
<----------
DOF2
<---
>
GT1
--------->
AGP1
--------->
ANAC58
<---------
At4g35610
<---------
DAG2
<-----------
GT1
------------
TaNAC69(2)
---------->
DOF2
<---------
ATHB12
<-----------
HVH21
<---------
DAG2
<------
=================================
MADS_MADS
------->
TEIL
<---------
ANAC58
=========================
tggaggaagatccacttgttcctctaaaagcaagaaaaactccaatgaagctaatggctgcgtcactgcactttaccacttttttcatttccaccatttt
12998700
--------->
YAB1
<---------
ICU4
<---------
YAB1
<---------
ICU4
--------->
ICU4
--------->
TGA2(2)
<-----------
TGA1
--------->
ANAC55(2)
<---------
bZIP60(1)
--------->
bZIP60(2)
--------->
ANAC58
--------->
ANAC46
--------->
DEAR3(1)
--------->
O2
<---------
MYB111(2)
--------->
ANAC55(1)
--------->
ICU4
=============================
MYC_MYB
<---------
ANAC55(2)
--------->
TGA1a
--------->
AtMYB61
--------->
ANAC55(2)
<---------
O2
<---------
MYB55(2)
<---------
ANAC58
<---------
TGA1a
<---------
ALFIN1
<---------
ANAC58
--------->
ANAC58
<---------
MYB46(2)
<---------
ANAC46
--------->
bZIP60(1)
-------->
P
<---------
GLK1(2)
<---------------
AtSPL3
<---------
ANAC55(2)
------>
MYB83
--------------->
AtSPL3
<-----------
HVH21
--------->
MYB46(3)
<-----------
GT1
<---------------
AtSPL8
==================
bZIP_DOF
<---------
MYB111(1)
<---------
TOE2(3)
----------
DOF2
--------->
YAB1
------>
MYB46(1)
---------->
DOF2
<---
--------
GT1
<---------
YAB1
--------->
MYB55(1)
--------->
LBD16
<-------
TEIL
-------
---
ICU4
<-----------
STF1
--------->
MYB46(3)
--------->
HSFB2a(2)
--------
==================
bZIP_DOF
--------->
MYB46(3)
<---------
HSFB2a(2)
--------->
ZAT6
>>>>>>>>>
GATA-1
tactttccttcacgtcatcatcatcaccaccaacctagtattgattctccctccagaactcgtaaag
gtacgtgctatctctatctctctatagataaag
12998800
--------->
ANAC58
--------->
bZIP60(2)
--------->
ANAC46
--------->
ANAC58
------>
NtERF2
--------->
ATERF1(1)
<------
NtERF2
------>
NtERF2
<---------
RAP2.3(1)
--------->
bZIP60(1)
--------->
PCF2
<---------
bZIP60(1)
<---------
PCF2
<------
NtERF2
--------->
RAP2.3(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
<---------
ERF1
<---------
RAP2.3(1)
<---------
RAP2.3(3)
--------->
ANAC46
<---------
DEAR3(1)
--------->
ANAC58
<------
MYB46(1)
--------->
ANAC58
<------
MYB83
<---------
At4g35610
--------->
ALFIN1
---
ZmHOX2a(1)
<---------
AtLEC2
<---------
AtMYB61
<------
ZmHOX2a(1)
-->
DAG2
<---------
DAG2
<---------
YAB1
<---------
ANAC58
<---------
YAB1
-->
DOF2
<----------
DOF2
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
ZAT2
--------->
At4g35610
gacttgggagctttttgcaagacagtgagtgaggaatgttatgctactgaaacttgtag
gcttggtggcgccacgaaacagcttggacttatcagaggag
12998900
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AGI:
At4g25430.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17701.1)
Range:
from: 12998371
to: 13000221
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.