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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
GLK1(2)
<---------
At4g35610
--------->
ANAC55(2)
--------->
At4g35610
<---------
ANAC55(2)
--------->
ICU4
--------->
ARR11(3)
<---------
AHL20(2)
<---------
TOE2(3)
<---------
ARR11(3)
--------->
AHL20(2)
------->
At4g35610
<---------
GLK1(1)
------>
ZmHOX2a(1)
--------
At4g35610
--------->
GLK1(1)
<---------------
AGL15
<-----
-----
P
--------->
RVE1(1)
--------------->
AGL15
<----------
DOF2
-
MYB46(1)
<---------
RVE1(1)
<---------
MYB59
<-----------
GT1
-
MYB83
--------->
CCA1(1)
----------------->
AG
<-----------
GT1
-->
MYB59
<---------
YAB1
----------->
GT1
--------->
ARR11(3)
<---------
RVE1(1)
-->
MYB111(2)
--------->
DAG2
<---------
ARR11(3)
--------->
ARR14(2)
-->
MYB111(1)
---------->
DOF2
<-----------
ARR10
<---------
ARR14(2)
---
MYB46(3)
----------->
GT1
<---------
ARR11(3)
----------------->
AGL1
<---------
GLK1(2)
<--
-->
MYB46(2)
---------->
DOF2
--------->
ARR11(3)
<----------
DOF2
--------->
ETT(2)
<---------
DAG2
tagctaatgtttataattctaaagtataaaaaggtaagatatctgactacaaaatcttttcctaattaagtattgtagacggattttttaccctttttta
12110500
<---------
YAB1
--------->
YAB1
<---------
ICU4
<--------
ATHB1
-------->
HAHB4
--------->
ATHB51
--------->
ICU4
<---------
AHL20(2)
--------->
YAB1
<---------
ICU4
<---------
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ATHB51
--------->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--
--------->
AHL20(2)
<---------
AHL20(2)
----
------
GT1
<---------
AHL20(2)
--------->
WOX13(1)
--------->
ICU4
------->
TEIL
---------
--------
DOF2
--------->
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ICU4
--------->
ZAT6
cttttgacttaataaataattatgaagaattttttttttcaattagataattaaattagttaataatttgtaagaattgaatctttgaactctatcatac
12110600
<---------
ICU4
--------->
ATHB12
--------->
ATHB51
-------->
ATHB1
<---------
AHL20(2)
<
--------->
AHL20(1)
<--
<---------
YAB1
---
<-----------
GT1
-----
<---------
AHL20(1)
-------
--------->
AHL20(1)
----------->
GT1
<------
--------->
AHL20(2)
--------->
AHL20(2)
<------
<---------
AHL20(2)
<---------
AHL20(2)
---------
<---------
AHL20(2)
--------->
ANAC58
xxxxxxxxxxxxxxxx>
smallRNA(i)
<---------
AHL20(2)
<---------
ATHB51
------>
MYB83
--------->
AHL20(2)
--------->
MYB59
--------->
GT1
--------->
AHL20(2)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
xxxxxxxxxxxxxxxx
------>
DOF2
--------->
YAB1
--------->
ICU4
------>
MYB46(1)
<---------
AHL20(2)
<---------
YAB1
------
>
YAB1
--------->
AHL20(2)
--------->
YAB1
--------->
ANAC58
--------->
ICU4
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
aaagttaaactattaaaaataaattttacaaaaattattgtatcgcaccaaattttaaatagaaaaaattagtttagagacttctgattcggtccaacaa
12110700
--------->
SPL7
---------
SPL7
<---------
ANAC58
-------------
AtSPL3
<---------
ANAC58
------------>
AtSPL3
<---------
ANAC46
---->
MYB52(1)
---------->
ID1
-----------
-->
MYB46(3)
<----------
DOF2
------>
MYB46(1)
---
MYB55(2)
<---------
ARR11(3)
------>
MYB83
---
MYB52(2)
--------->
TOE2(3)
<----------
DOF2
<-----------
GT1
-->
RAV1(1)
<-----------
GT1
--------->
ARR11(3)
---------->
DOF2
------------>
MYB.PH3(1)
xxxxxx>
smallRNA(si3)
<---------
AHL20(1)
----------->
GT1
---------->
DOF2
->
GAMYB
<---------
AHL20(2)
<---------
CCA1(2)
<------
ZmHOX2a(1)
<---------
AHL20(2)
acggtacgatttaaaattacaacattaatctaatatctttctttttcgtattttaggagcgaaacaaagacaaaaatttaaagctgttaccatccaattt
12110800
<---------
ARR11(3)
----------->
GT1
<----------
DOF2
--------->
ANAC58
--------->
GLK1(2)
--------->
ANAC46
--------->
ARR11(3)
------------>
CBF
--------->
ANAC58
----------->
TBP
*
TSS
<---------
CCA1(2)
----------->
GT1
--------->
ARR11(3)
---------->
DOF2
--------->
ANAC58
<-------
GAMYB
----------->
GT1
<---------
CCA1(2)
--------->
YAB1
--------->
ANAC46
->
CBF
---------->
DOF2
--------->
GLK1(2)
------>
ZmHOX2a(1)
--------->
ANAC58
gagggttgtaaaagcaaggagaaaaatctatatatctagagtcctccaaagacacttataagttctc
acacacaatcttttatctttcattgtttctctc
12110900
<-----------
ARR10
<---------
ARR11(3)
--------->
ARR11(3)
--------->
GLK1(2)
--------->
RVE1(1)
----------->
GT1
<----------
ID1
----------->
GT1
<---------------
AGL15
--------------->
AGL15
<-----------------
AG
--------
----------------->
AGL3
------->
TEIL
<---------
TOE2(3)
<---------------------
WRI1
--------->
YAB1
<----------
DOF2
----------------->
AG
--------->
ANAC46
<---------
At4g35610
------>
ZmHOX2a(2)
----------------->
AGL1
<---------
YAB1
----
<---------
ARR11(3)
----------------->
AGL2
--------->
YAB1
--------
--------->
ARR11(3)
<-----------------
AGL1
<---------
AHL20(2)
----
<----------
DOF2
<-----------------
AGL2
<---------
MYB52(1)
<-------
TEIL
<----------
DOF2
<---------
TOE1(3)
----------->
GT1
----------->
GT1
--------->
At4g35610
actctctcttgttgtgaattctttcctttgatctttcaggtttgcaagttccaa
atggggaaaaaatctaagccgtttatattatcatcagatgcaccta
12111000
--
<--
<---
----
----
----
---------->
DOF2
--------->
MYB46(3)
-----
<---------
YAB1
----------->
GT1
--------->
ANAC58
->
ANAC58
--------->
ARR11(3)
---------->
DOF2
--------->
ANAC58
------
----->
ANAC58
<---------
ARR11(3)
--------->
At4g35610
--------->
ANAC58
----------
->
ANAC58
---------->
DOF2
--------->
ZAT18
----------->
RAV1(1)
--------->
ANAC58
----->
ANAC58
<------
NtERF2
<---------
At4g35610
<---------
At4g35610
<---------
REM1(1)
<---------
ATHB12
agccccctcataggcagccttacaaagctcttctgataagcgctcagtcatctaaagtgaattcaacagatggtgaagcaactggttcgcaaatgaagcc
12111100
---------->
DOF2
<---------
ARR14(2)
------->
LBD16
----
NtERF2
------
LBD16
<---------
ARR11(3)
----->
LBD16
--------->
ANAC58
--------->
ARR11(3)
----->
At4g35610
---------->
DOF2
<---
-->
NtERF2
--------->
ANAC58
<---------
YAB1
==============
HOX2a_HOX2a
----------->
GT1
-------
---->
DEAR3(1)
--------->
ARR11(3)
=========================
HOX2a_HOX2a
<----------
DOF2
--->
ATERF1(1)
---------->
DOF2
---------->
DOF2
<------
ZmHOX2a(1)
<---------
LBD16
------>
ZmHOX2a(1)
>
DOF2
---------->
DOF2
<---------
ARR11(3)
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
<---------
DAG2
gcggaaacaaagaaaagccccttacaaagctcttctcattagagctcgatcaccaggactaagtgaggaaagctcttcggagagtgacttttcctatgaa
12111200
--------->
At4g35610
<---------
At4g35610
<---------
HSFB2a(2)
<---------
LBD16
--------->
ANAC58
--------->
HSFB2a(2)
--------->
At4g35610
--------->
MYB46(3)
<-----------
RAV1(2)
--------->
ARR14(2)
<---------
ICU4
--------->
ANAC58
<---------
HSFB2a(2)
<---------
ARR14(2)
--------->
YAB1
-------->
P
--------->
HSFB2a(2)
------
At4g35610
--------->
YAB1
--------->
ANAC58
--------->
TOE1(2)
<-
--->
DOF2
<-------
TEIL
--------->
ANAC58
--------->
At4g35610
---------->
DOF2
--
gcggattgtgaagcatccgattcatcatcagcggagagtgaagcaaccaatatgaagccgatgaagaacaaaactgcgagaaaagctccagaagcgaggc
12111300
============================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
=============================
HOX2a_HOX2a
--------->
GLK1(1)
<---------
GLK1(1)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
AGP1
----------->
GT1
<---------
ARR11(3)
--------->
LBD16
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
HSFC1(2)
<---------
HSFB2a(2)
--------->
HSFC1(2)
--------->
YAB1
--------->
HSFB2a(2)
---------->
DOF2
===============
HOX2a_HOX2a
<---------
LBD16
--------
At4g35610
<------
ZmHOX2a(1)
--------->
YAB1
<-----------
HVH21
---------->
DOF2
------->
At4g35610
================
HOX2a_HOX2a
------>
ZmHOX2a(1)
----------->
GT1
----
tagcagacaaagagcaaaacaagaggagaaggatctcagagaagaacaataatcctgaagaaaccatgtcctgggaaccagaagttaaaaagactctttg
12111400
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AGI:
At4g23110.1
Description:
insulin-like growth factor binding. contains InterPro domain Insulin-like growth factor binding protein; (InterPro:IPR009168)
Range:
from: 12110868
to: 12111581
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.