Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------MYB52(1)                                                          ----------->HVH21                                                         --------->LBD16                                                         --------->At5g28300                                                        <---------TGA1a                                                        --------->O2                                                        ==========================MYC_MYB                                                        =================bZIP_DOF                                                        --------->TGA1a                                                        <---------O2     <--------P                    --------->AHL20(2)                  =====================================MYC_MYB                    <---------AHL20(2)                 <------NtERF2   <------MYB83             -----               <-------TEIL                           ------>NtERF2    <------MYB46(1)          <----             <-------MYC4                             <------NtERF2   --------->MYB46(2)       <-----             <-------MYC3                            --------->ANAC58 --------->MYB111(2)    --------             <-------MYC2                            --------->ANAC46 --------->MYB59<-------GAMYB             ------->MYC3                  <---------MYB46(3) <----------DOF2        ----------->GT1             ------->MYC2           ==============================bZIP_DOF          ----------->GT1 --ANAC58    ------->PIF5           <----------DOF2  --------->ANAC58 <---------MYB46(3)     -------- --ANAC58    <-------PIF5      <---------At5g28300 --------->ATERF1(1)--------->MYB111(1)<---------YAB1 --ANAC46  ------->TEIL       <-----------GT1 <---------REM1(1)       <---------AtMYB61 --------->AHL20(2)   agtttttggaatgcacgttcatataaatgattttacagcttttagttgttgtagcccgccgtgacttttggtttggtagtttatgtctgttaaaattata  11572400                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                     --------->ATHB12                                                                   <---------WOX13(1)                                                                   <--------P                                                          <---------ANAC46                                                          <---------ANAC58      <---------At4g35610  <-----------HVH21         --------->MYB52(2)                ----------->GT1   <----------DOF2    --------->ARR11(3)             <-----------RAV1(1)               <------MYB83 ---->AHL20(2)        <---------ARR14(2)             <---------MYB46(3)<---------WOX13(1) -----AHL20(2)        --------->ARR14(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<------MYB46(1) ----YAB1             --------->GLK1(2)         <---------TOE2(3) <-------GAMYB       --------->MYB46(2) ->YAB1  <---------At4g35610                   <-----------GT1   <---------MYB46(3)   --------->MYB59 ->AHL20(2)   <----------DOF2             ----------->GT1 <---------ANAC58        <---------YAB1  ---   aattgctcttctgctactttgaaaaatctggtcagtagtacaagaggtttaacatttgttgcgtcgatggttgattgttatgttatgtttggtaaaaaat  11572500                                                                 ----------->GT1                                                             <---------ICU4                             <----------DOF2                <---------ATHB12                          <---------YAB1                    <---------YAB1                      <---------DAG2        --------->REM1(1)--------->ATHB12                      <----------DOF2<---------At4g35610    --------->ICU4           --------->TOE2(3) ------>MYB52(1)     --------->TOE2(3)  <-----------HVH21------>ZmHOX2a(1)      <----------DOF2   aaacgaatgctcttctccagtttcctttatgcttttgtcaactgttacatcttcttctcctaatgatttgtatatacttaagcttttccataaaactaag  11572600                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                     <---------AHL20(2)                                                                  ----------->GT1                                    --------->ANAC58              -------->HAHB4                  <---------ANAC55(2)     --------->DAG2          --------->ATHB12                  --------->ANAC58  --------->AtLEC2             <---------YAB1                  --------->ANAC55(2)    ---------->DOF2         --------->ICU4                  --------->ANAC46  --------->ANAC58         --------->AHL20(2)                  --------->ANAC58  ------>MYB46(1)        --------->TOE2(3)     <--------HAHB4        ---------->DOF2         >>>>>>>>>MYB2           ----------->RAV1(1)      --------->ATHB12    <---------ZAT14  ---------->DOF2------>MYB83       --------->ANAC46        --------->GLK1(2)    --------->ZAT14--------->TOE2(3)--------->ANAC46 --------->ANAC46--------->AHL20(2)<---------AtLEC2   tcccagtgaagaaagaaactacgtaaaccgagaaaaccaagcaaaaagagggtttacacaacataaaatgattaaattgagaatcatttgcattacctcg  11572700                                                                 --------->YAB1                                             <---------------AGL15                                            ----------------->AGL1                                            ----------------->AGL3                                            ----------------->AG --------->AHL20(2)                                            <-----------------AGL1     <---------AHL20(2)                                            ----------------->AGL2     --------->AHL20(2)                                            <-----------------AGL2   <-----------TBP                                    <---------MYB59           --------->TOE2(3)                      <------------CBF      <-----------------AGL3  <---------ICU4                     --------->ATHB12  <---------GLK1(2)<---------At4g35610             ----------->HVH21                 <-----------GT1   <---------At4g35610  --------->At4g35610         <---------At5g28300           ----------->GT1   <---------ANAC46--------------->AGL15<---------TOE2(3)<-----------GT1   gtattacatgggctggaaataacttattgggccttggacctgattttccaaaaatggtcgctcacattaatatttatatgtgattttacagtgacaactc  11572800                                             <----------DOF2                                        <                                          --------->ARR11(3)                               --------->HSFB2a(2)                                          <---------ARR11(3)                              <---------LBD16                                   ------>NtERF2                               <---------------------                    --------------------->WRI1                            <---------GLK1(2)<---------HSFB2a(2)  *TSS           <------------------------ANAC81                     ------>ZmHOX2a(1)<----------DOF2   cacaaatcagccctaactctgtttttgttttcttcgacgactgaggtcttttctctctcgctctcgtcttcctcttgattctcttcttcttttctggagt  11572900                                                       --------->GLK1(1)                                                  <---------At4g35610                                                  --------->At4g35610                                                <---------ZAT14       <-------MYC3                          ----------->GT1       --------->ZAT18       ------->MYC3     <---------DAG2    ----------->TGA1        <---------ANAC58 --------->ARR14(2)             <-----     <----------DOF2 <---------ICU4            <---------ANAC58 <---------ARR14(2)           -------- ---------At4g35610 --------->ICU4        ------->TEIL--------->ARR14(2)    <---------YAB1   <------- ---ANAC81     ----------->GT1       <---------AtLEC2 <---------ARR14(2)  <-----------GT1 --------->YAB1   ttcgctgcttttttagcctgtaaaaatgacgaaaattttgtatgaatttgtgtgctgatatgctcgaatccacatgttacgcttgtgttgaataatcata  11573000                                                     <-----------GT1                                            --------->YAB1       <---------ANAC46   <------MYB46(1)                       --------->WOX13(1)   <---------HSFB2a(2)   <------MYB83                       --------->GLK1(2)--------->ANAC55(2) ----CCA1(2)                          <---------ARR11(3)      --------->HSFB2a(2) ->YAB1                               --------->ARR11(3)     <---------LBD16 --ICU4      <---------ATHB12  <-----------GT1     <----------DOF2                     ----------->HVH21   tcatttggttatcgaatcaattctagttccaatttacaaaaatctatcaaactctttacgttttctggagtatgttgagcttgaaactagtgacatagat  11573100                                                    <---------YAB1                                         <---------GLK1(2)                                <---------ARR11(3)                                         <---------ARR14(2)                               --------->ARR11(3)     --------->AHL20(2)      ----------->GT1    <----------DOF2        <----------DOF2    <---------GLK1(2)    --------->AHL20(2)   <---------TOE2(3) <-------TEIL   <----------DOF2             ---------->DOF2  --------->TOE2(3) ----------->GT1      --------->ARR14(2)      <----------DOF2     <---------AHL20(2)   gaaacattaaaaaaacatggaattgttaagtttgtgaaaattggattcgtctttgtgattctttattctttgtctttgctgtgatatataaagattttgt  11573200                                                        <---------At4g35610                                                --------->ATHB12                                               --------->ICU4                   --------->ANAC58                                               <---------YAB1                   --------->ANAC58                                    <---------------AGL15                --------->ANAC46                                    --------------->AGL15                --------->ANAC58                                   <-----------------AG --------->At4g35610    --------->DAG2     <--                                   <-----------------AGL2                --------->ANAC58      ------                                   <-----------------AGL3         <-------TEIL---------->DOF2  <-----   atagaacaacaatttgggagatggagacactgaaattgctgtatttgggattattggcagataaaagattcatacaagaaaaaagcaaatttcgccactg  11573300  Previous    Next  AGI:  At4g21790.1    Description:  TOM1 (TOBAMOVIRUS MULTIPLICATION 1). similar to TOM3 (tobamovirus multiplication protein 3) [Arabidopsis thaliana] (TAIR:AT2G02180.1); similar to tobamovirus multiplication 1 [Nicotiana tabacum] (GB:BAE43836.1); contains InterPro domain Protein of unknown function DUF1084 (InterPro:IPR009457) Range:  from: 11569777    to: 11572561    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21800.1    Description:  QQT2 (QUATRE-QUART2); ATP binding. similar to EMB1705/QQT1 (QUATRE-QUART1) [Arabidopsis thaliana] (TAIR:AT5G22370.2); similar to EMB1705/QQT1 (QUATRE-QUART1), ATP binding [Arabidopsis thaliana] (TAIR:AT5G22370.1); similar to ATP-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12790.4); similar to unnamed protein product [Vitis vinifera] (GB:CAO44938.1); contains InterPro domain Protein of unknown function, ATP binding; (InterPro:IPR004130) Range:  from: 11572802    to: 11575157    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.