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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                        <-----------GT1
                                                                                   --------->AHL20(2)
                                                                                   <---------AHL20(2)
                                                                              <---------YAB1
                                                                              --------->ICU4
                                                                            <--------HAHB4
                                                                            <---------ICU4
                                                                            --------->YAB1
                                                                           --------->ICU4
                                    ---------->DOF2            --------->ANAC58   <---------AHL20(2)
                               ------>ZmHOX2a(1)               --------->ANAC58--------->ATHB51
                              --------->TOE1(3)       <---------STY1(2)    <---------ATHB12
                              --------->TOE2(3)       --------->STY1(2)    <---------YAB1
                            ------>MYB83              <---------ZAT2   <---------MYB52(1)      -----
                            ------>MYB46(1)    --------->CCA1(2) --------->YAB1--------->AHL20(2)
                       <-----------GT1     <------NtERF2  <---------YAB1 --------->WOX13(1)---------
 
agataaacatccacaagaacaaaattataccatccttaagaaaggccgagagatgctagctacgataagcatcagttaatcattatttattttacctcag  10660700
                   --------->At4g35610      --------->HSFB2a(2)
                   <---------At4g35610      <---------HSFB2a(2)                                  ---
                   ------>ZmHOX2a(1)       <---------ETT(2)                                     <---
     --------->bZIP60(1)         <----------DOF2            ------>ZmHOX2a(1)                   ----
     <---------GLK1(1)      <------ZmHOX2a(2)               --------->LBD16                    <----
     <---------bZIP60(1)   <---------ARR11(3)             ----------->RAV1(2)          --------->ANAC55(2)
     --------->GLK1(1)     --------->ARR11(3)    ----------->GT1           --------->bZIP60(1)------
---->At4g35610     ================HOX2a_HOX2a   <----------ID1            <---------bZIP60(1)<-----
>TOE2(3)         --------->ZAT18<---------DAG2  ----------->GT1            --------->ANAC46  <------
 
catcactgatatcagataagtcctctgcaagatcacctttagactgtcgagaaggaaaaactcctgaaaaatcaaatcacatcaccatttaagtatttac  10660800
           --------->ARR11(3)
          <---------GLK1(1)
         <---------ARR11(3)
     ---------->DOF2
    --------->AHL20(2)    <----------DOF2                                      <---------ARR14(2)
------>LBD16             <---------ICU4                               <-----------RAV1(1)
------HSFB2a(2)        --------->GLK1(2)                              <---------MYB46(3)
----->HSFB2a(2)        <---------ARR11(3)                             --------->MYB52(2)
-----LBD16--------->GLK1(1)                                         <----------DOF2<----------DOF2
--->MYB52(1)   --------->At4g35610     --------->ZAT6        <---------AtLEC2  --------->ARR14(2)
----At5g28300  <---------At4g35610 --------->AHL20(2)    <----------DOF2---------->ID1 <---------TOE2(3)
-----GT1 --------->ARR11(3)  <-----------GT1      --------->ALFIN1 --------->TOE2(3)   <---------TOE1(3)
 
cggaaaataaaagatatcatctgcataatctttaacaatataacactcatggagaggggtctttgcattacctttgttgccatatacttttaggtttcta  10660900
                <-----------GT1            <------ZmHOX2a(2)
             --------->GLK1(1)           ------->GAMYB
             <---------GLK1(1)         ------>MYB83
      <---------ZAT14                  ------>MYB46(1)          <---------ANAC58
     <----------DOF2                  --------->MYB52(1)        <---------GLK1(2)
  <---------ARR11(3) ----------->RAV1(2)--------->MYB46(3)      <---------ANAC58      <---------WOX13(1)
 <---------ATHB12  <---------ALFIN1  --------->AtMYB61--------->YAB1        ---------->DOF2
 
gccaataactttactgatttctccacctgaaattgatacaccaacgatcaaaaacattcaaaacatagcttctcaacaaaaaagagcagattgataccat  10661000
                                                                    ----------->RAV1(1)
                                                                    --------------->AGL15
                                                                    <---------------AGL15
                                                                   ----------------->AGL2
                                                                   <-----------------AGL1
              --------->ANAC58                                     ----------------->AGL3
              --------->ANAC55(2)                                  ----------------->AGL1
              --------->ANAC58                                     <-----------------AGL2
         ------>ZmHOX2a(1)                                  ---------->DOF2
     --------->ARR14(2)                                 <----------ID1     ----------->GT1    <-----
 ---------->DOF2 --------->MYB52(1)              <---------ARR11(3)<-----------------AG   <---------YAB1
 
caaacaaagttcctcataagtaatggaatctatagttttgtcatcgagccaatatcaataccacaaagagaccacatatggtaaactaagtttcttatta  10661100
                                                                                               <----
                                                                                              ------
                                                                                             <------
                                                                                             <------
                                                                                       ------------>CBF
                                                                                      <-------------
                                                                                      --------------
                                                                                      --------->ANAC58
                                                                                      --------------
                                                        <------ZmHOX2a(1)             <-------------
                                                 --------->LBD16                      --------------
     <---------ICU4                     =======================HOX2a_HOX2a        --------->ANAC58
     --------->YAB1                     <------ZmHOX2a(2)    ----------->GT1      --------->ANAC46
    <---------YAB1       <---------AHL20(2)  --------->GLK1(2)                    --------->ANAC58
    --------->ICU4      --------->AHL20(2)   --------->ARR14(2)         <---------YAB1--------->ANAC58
  --------->YAB1        <---------AHL20(2)   <---------ARR14(2)       <-----------GT1------->TEIL---
------GT1  ---------->DOF2            --------->At4g35610  ----------->GT1<------------CBF  --------
 
cattaccatgatcacaaagctctaaaatttaatctagaatcagatcaaaatccgaataaggagggagaaaattttaccattgttcacgaacccaatgcgg  10661200
                                                                                    ------>ZmHOX2a(1)
                                                                              ------->MYC3
                                                                              <-------MYC2
                                                                              ------->MYC4
                                                                              <-------MYC4
--NtERF2                                                                      ------->MYC2
--->LBD16                                                                     -------->ABF1
---RAP2.6(2)      --------->GLK1(2)                                          <---------ANAC55(2)
----ID1           <---------ARR14(2)                                         --------->O2
----AG            --------->ARR14(2)                                         --------->TGA1a
--->AGL1          <-----------ARR10      --------->RVE1(1)                   <---------TGA1a
--->AG ------>ZmHOX2a(2)             <---------AHL20(2)    ----------->RAV1(2)<-------MYC3
----AGL1  <---------DEAR3(1)         --------->AHL20(2)  --------->ANAC58    =======================
--->AGL2 <---------LBD16         --------->AHL20(2)      --------->ANAC58    <---------O2
------->DOF2     <---------GLK1(2)--------->AHL20(2)   <<<<<<<ZML2           --------->ANAC55(2)
->RAP2.6(3)<---------DEAR3(2)--------->AHL20(2)    --------->TOE1(2)     <-----------GT1          --
 
caaagatagatcgccggtgagaatctgggttttaaaataaaaaaatatcagaaacctagaacgcctgggtttgaattaacacgtgtcctagtcaaattgg  10661300
               --------->ANAC58
               --------->ANAC58
           --------->O2
           --------->ANAC46
           --------->ANAC58
           --------->ANAC55(1)                       ------->TEIL
           --------->ANAC55(2)                       <---------ZAT18
           <---------ANAC55(2)          <---------CCA1(1)
           --------->ANAC58             <---------RVE1(1)
           --------->TGA1a             --------->ARR11(3)                             --------->LBD16
           <---------TGA1a       --------->YAB1     <-----------GT1    --------->ARR14(3)
           <---------O2   <----------DOF2 <-----------TBP              --------->ARR14(2)
           --------->bZIP60(2)--------->YAB1<---------AHL20(2)         --------->ARR11(3)
           ==========================bZIP_DOF    --------------->AtSPL8<---------ARR14(3)
    =================bZIP_DOF<---------YAB1 --------->AHL20(2)         --------->GLK1(2)    --------
    <----------DOF2 --------->DEAR3(1) <---------AHL20(1)              <---------ARR11(3) ----------
===============bZIP_DOF  <---------DAG2<---------ARR11(3)  <----------DOF2           ---------------
--------------------->TaNAC69(2)<---------YAB1<---------YAB1       --------->YAB1    <--------------
 
ttataggctttgccacgtaagcacagacccttttgataataagatatttatatttgtaccctctttaatatcaaaatcttcgattttcccccaaaaagaa  10661400
                      ----------->GT1
                   <---------MYB46(3)
                  --------->ALFIN1
   --------->LBD16<---------AtMYB61                                                         <-------
  <---------HSFB2a(2) <---------MYB46(3)                                                <---------CCA1(2)
  --------->HSFC1(1) --------->ALFIN1                      ------>NtERF2             <<<<<<<<<<AtSR1
  <---------HSFC1(1) <---------AtMYB61                  <---------At4g35610         --------->ANAC55(2)
  --------->HSFB2a(2)<---------ANAC46                   <---------DEAR3(2)       --------->ARR14(2)
--->GT1           <---------ZAT6                        --------->At4g35610      <---------ARR14(2)
>DOF2         --------->ZAT14                          <---------DEAR3(1)       --------->DOF5.7(2)
>AGL15        <---------ZAT14                        <-----------HVH21   ----------------------->TaNAC69(2)
-AGL15        --------->ZAT18        *TSS    <----------DOF2  ---------->DOF2 <---------ANAC46
 
aatttccagaaaacgagcgtagtggtggtgaatcactgactcttctctctttcgctcgtcgctgcgaaagagcatttgttttcgtttacgcgtttctttt  10661500
                                                                               --------->At5g28300
                                                                              ----------->GT1
                                                                              <------MYB46(1)-------
                 >>>>>>>ZML2      <----------DOF2                             <------MYB83   -------
                 <---------HSFB2a(2)                                          <---------DEAR3(2)
                 --------------->AGL15                                       <---------DEAR4(1)
       <---------ZAT18           <---------ICU4                              <---------MYB46(3)
       --------->ZAT18         --------->GLK1(2)          <---------TOE2(3)  --------->MYB46(2)
    <---------ANAC46       <-----------GT1      <---------ARR14(2)           <---------DEAR3(1)
    <---------ANAC58    ----------->GT1         --------->ARR14(2)           --------->MYB55(2)
    <---------ANAC58   --------->DAG2          <---------CCA1(2)<---------AHL20(2)           -------
---DOF2<---------ZAT14---------->DOF2   <---------At4g35610<---------YAB1   <---------ORA47(1)
 
tctcgttgagtgcatttgttctaggtaaagtaacaatcttttcttctgctatatccgaattgatgatttttttttttgggtcggtgaatttttgctacgc  10661600
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AGI:  At4g19550.1   
Description:  transcription activator/ transcription regulator/ zinc ion binding. similar to RNA polymerase II transcription factor [Arabidopsis thaliana] (TAIR:AT3G09360.1); similar to unknown [Populus trichocarpa] (GB:ABK92899.1); contains InterPro domain Brf1-like TBP-binding; (InterPro:IPR011665); contains InterPro domain Transcription factor TFIIB related; (InterPro:IPR000812)
Range:  from: 10659391    to: 10661109    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g19560.1   
Description:  CYCT1;2; cyclin-dependent protein kinase. Identical to Cyclin-T1-2 (CYCT1-2) [Arabidopsis Thaliana] (GB:Q56YF8;GB:O49474); similar to CYCT1,4, cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT4G19600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47935.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Transcription regulator cyclin (InterPro:IPR015429); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028)
Range:  from: 10661438    to: 10664726    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.