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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
-------
--------------->
AtSPL8
------>
ZmHOX2a(1)
------->
GAMYB
-------
<---------------
AtSPL8
<-----------
GT1
<---------
ALFIN1
--------->
HSFB2a(2)
-
-->
ZmHOX2a(1)
--------->
GLK1(1)
--------->
ZAT2
<---------
TOE2(3)
<-------
TEIL
-
-----
MYB59
------->
TEIL
<---------
ZAT2
--------->
YAB1
<---------
HSFB2a(2)
-
taatttgtactaacatttggaacgtatttcctactcttctccctgctccaactcccaaaaataagattagttagatttctataactaatatacatgtata
9758900
----------->
GT1
----------->
GT1
<---------
ANAC46
--------->
AHL20(2)
<---------
LBD16
----------->
GT1
--------->
ALFIN1
--------------->
AGL15
<---------
DEAR3(2)
<---------------
AGL15
<---------
DEAR3(1)
-->
ARR14(2)
<-----------
GT1
<---------
MYB52(1)
-->
ZAT14
--------->
At5g28300
--------->
DEAR3(2)
---------------->
AGL1
--------->
DAG2
<---------
AHL20(2)
<-------
GAMYB
<----------
ID1
---------------->
AGL3
---------->
DOF2
--------->
AHL20(2)
<---------
MYB46(3)
---------->
DOF2
----
---------------->
AGL2
--------->
YAB1
<---------
AtLEC2
---------->
DOF2
--------->
ALFIN1
--------->
MYB52(1)
ctcccaaaaacagtaaaaccatattaataaagctaattttgcatagatttatttcggtaaaccggcggttcaagttggggaaaaaaaagacaaacggtct
9759000
<---------
WRKY18(1)
--------->
WRKY12
--------->
TGA2(1)
<---------
TGA2(1)
<---------
ANAC46
------>
NtERF2
<---------
ANAC55(1)
--------->
ANAC55(2)
--------->
YAB1
<---------
ANAC55(2)
<---------
ATHB12
<---------
ANAC58
<---------
RAP2.6(2)
------>
MYB83
<---------
ANAC58
--------->
RAP2.6(3)
------>
MYB46(1)
<---------
TOE2(2)
----------->
HVH21
--------->
WOX13(1)
<---------
TOE1(2)
--------->
TOE2(3)
<---------
O2
<---------
ANAC46
<---------
YAB1
---------->
DOF2
--------->
O2
<---------
ANAC58
<---------
bZIP60(1)
--------->
AtLEC2
<-----------------------
TaNAC69(2)
----------->
HVH21
=====
------>
DOF2
---------->
DOF2
--------->
CCA1(2)
<---------
ANAC58
--------->
bZIP60(1)
<----
aaagtcatccaaagacaaaaaaccaaagacaagttgagagagacgagaccaatcacaacattgcttcgtagattgcgtgacatcatccttgacggctact
9759100
--------->
AHL20(2)
------->
MYC4
------->
PIF4
<-------
MYC4
<-------
PIF5
------->
PIF5
------->
MYC3
<-------
MYC3
------->
MYC2
<-------
MYC2
--------->
TOE1(3)
<-------
PIF4
--------->
HSFC1(2)
--------->
TGA1a
<---------
HSFB2a(1)
<---------
O2
<---------
HSFC1(2)
<---------
TGA1a
------->
TEIL
--------->
O2
--------->
ANAC58
--------->
ANAC55(2)
<---------
ANAC55(2)
------------>
OsbHLH66
--------->
YAB1
------->
TEIL
<-----------
GT1
<---------
MYB52(1)
--------->
ANAC58
--------->
ANAC58
--------->
HSFC1(2)
<-------
--------->
ANAC58
--------->
ANAC46
--------->
HSFB2a(1)
<-------
<---------
ANAC46
<------------
OsbHLH66
<---------
HSFC1(2)
<---------
DAG2
====================================
bZIP_DOF
--------->
TOE2(3)
<---------
HSFB2a(1)
<-----------
GT1
<---
------
DOF2
----------->
GT1
<---------
AHL20(2)
--------->
YAB1
<----------
DOF2
<----------
DOF2
ttcatttgtgtcttatttggataaaacgcacgtgtttaattcacgaaccttcatagcaataagaaatttccattactttcatattttcaactttttttat
9759200
<-----------
GT1
<---------
AHL20(2)
--------->
LBD16
--------->
AHL20(2)
<---------
TOE1(2)
--------->
TOE2(3)
<-----------
GT1
------
--------->
AHL20(2)
<---------
ARR11(3)
<-----
<---------
AHL20(2)
<---------
AHL20(1)
<-----
--
AHL20(2)
--------->
AHL20(1)
------------>
CBF
<-------
TEIL
--------->
TOE2(3)
-------
--
YAB1
<---------
AHL20(1)
--------->
AHL20(2)
------->
TEIL
------------>
CBF
-------
--------
GT1
--------->
AHL20(2)
<----------
DOF2
--------->
AHL20(1)
<----------
DOF2
---------
tacccattacatgcttaaaatattaattcacaagtctttgtcaaaattcaatattttccaggttcatgaaccctttttatctcaatctactctataatat
9759300
<--
<--
<--
----------->
RAV1(1)
---
--------->
AHL20(2)
------>
MYB83
---
----------->
TBP
------>
MYB83
---
--->
ARR11(3)
<---------
GLK1(1)
------>
MYB46(1)
----
------
ARR10
--------->
LBD16
--------->
AtMYB61
<---
----
ARR11(3)
--------->
MYB52(1)
<---------
MYB59
----
-->
RVE1(1)
<---------
ALFIN1
--------->
ANAC58
<---
-->
CCA1(1)
<----------
DOF2
--------->
ANAC46
--------->
TOE2(3)
------>
MYB46(1)
---------
>
YAB1
<----------
ID1
*
TSS
----------->
HVH21
--------->
ANAC58
---------
ctccctataaattacaacaaaacctctttatttttc
attcacaccggacattttgaaatctcaacaagaaccaaaccaaacaacaaaaaaacattcttaa
9759400
<---------
GLK1(2)
--------->
ARR14(2)
<------
NtERF2
<----------
DOF2
<---------
ANAC46
<---------
YAB1
<---------
LBD16
<---------
ARR11(3)
<------
NtERF2
--------->
ARR11(3)
<---------
RAP2.3(1)
<-----------
GT1
------>
NtERF2
--------->
YAB1
<---------
RRTF1(1)
------
HAHB4
<---------
ERF1
<-----
-------
ICU4
<---------
RRTF1(3)
<-----
------
ATHB1
<---------
DREB2C(2)
------
----->
HAHB4
<---------
RAP2.3(3)
<---------
At4g35610
------>
ATHB51
<---------
RAP2.3(2)
------>
NtERF2
------>
YAB1
<---------
DEAR3(1)
--------->
bZIP60(1)
<---------
ARR14(2)
----->
AHL20(2)
<---------
RAP2.6(2)
--------->
ANAC46
--------->
ARR14(2)
------
ATHB51
<---------
RRTF1(2)
<---------
ANAC58
<---------
ARR14(2)
----->
ICU4
--------->
RAP2.6(3)
<---------
ANAC58
------>
NtERF2
<------
ZmHOX2a(1)
------
YAB1
----------->
TGA1
<---------
YAB1
<---------
bZIP60(1)
--------->
ARR14(2)
>
YAB1
----------->
HVH21
<---------
YAB1
<---------------------
WRI1
<------
NtERF2
>
TOE2(3)
<---------
MYB52(1)
<---------
ARR14(2)
<----------
DOF2
--------->
SPL7
<------
ZmHOX2a(1)
taattatctttctgttatgtcgatgacggcggattctcaatctgattatgcttttcttgagtccatacgacgacacttactaggaggaatcggagccgat
9759500
--------->
ARR14(2)
<---------
ARR14(2)
<---------
MYB52(1)
<-------
GAMYB
--------->
ANAC58
<------
MYB46(1)
--------->
SPL7
<---------
ETT(2)
<---------
WRKY12
<---------
SPL7
------
--------->
ETT(2)
<-----------
HVH21
<---------
ZAT14
------
----------->
HVH21
--------->
ARR14(2)
--------->
ZAT14
<-----
----
ARR14(2)
<------
MYB83
<-----------
GT1
--------->
ALFIN1
<----------
DOF2
----
MYB52(1)
----------->
GT1
<---------
ARR14(2)
<------------------
SPL14
<------
--->
ARR14(2)
--------->
MYB59
----------->
HVH21
---------->
DOF2
--------->
ANAC58
--------->
MYB52(1)
actcagtgagtcgacagcgagttcggttactcaatcttgtgtaaccggtcagagcattaaaccggtgtacggacgaaaccctagctttagcaaactgtat
9759600
<--
<--
<-----
<-----
----------->
HVH21
<-----------
HVH21
--------->
ANAC58
<---
<---------
TOE2(3)
<----------
DOF2
<---------
At5g28300
--------->
MYB52(2)
--------->
ANAC58
<---
--------->
CCA1(2)
<---------
MYB52(1)
--------->
MYB46(3)
------
<---------
LBD16
--------->
GLK1(1)
--------->
ANAC46
--------
--------->
ALFIN1
<---------
GLK1(1)
------>
ZmHOX2a(1)
<-------
<----------
DOF2
--------->
ARR14(2)
--------->
CCA1(2)
--------->
TOE1(3)
<-------
<---------
ANAC58
<---------
ARR14(2)
--------->
ARR14(2)
--------->
TOE2(3)
-----------
<---------
ANAC58
----------->
ARR10
<---------
ARR14(2)
--------->
ANAC46
--------->
ANAC46
--->
ARR14(2)
--------->
ZAT2
<-------
GAMYB
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
LBD16
->
TEIL
<---------
ZAT2
<---------
ANAC46
<---------
TOE2(3)
<---------
ARR14(2)
<---------
At5g28300
----
ARR14(2)
<---------
At4g35610
--------->
GLK1(2)
--------->
ANAC46
------>
NtERF2
<------
---
CCA1(2)
--------->
At4g35610
<---------
GLK1(2)
<-----------
GT1
------->
GAMYB
<--------
ccttgcttcaccgagagctggggagatttgccgttgaaagaaaacgattctgaggat
atgttagtttacggtatcctcaacgacgcctttcacggcggtt
9759700
--------->
GLK1(2)
<---------
GLK1(2)
<---------
RAP2.6(3)
--------->
ARR14(2)
--------->
RAP2.3(2)
<---------
ARR14(2)
--------->
RAP2.3(3)
<---------
MYB46(3)
--------->
DEAR3(1)
<-------
GAMYB
<------
NtERF2
--------->
At5g28300
--------->
ATERF1(1)
<------
NtERF2
--------->
RAP2.3(1)
<---------
MYB46(3)
--------->
At4g35610
<---------
AtMYB61
<---------
At4g35610
<---------
DEAR3(1)
<---------
ATERF1(1)
<---------
DREB2C(2)
-------
ANAC58
<---------
ANAC46
-------
ANAC58
--------->
ALFIN1
---
P
--------->
LBD16
------>
NtERF2
----
MYB52(1)
--------->
LBD16
<---------
RAP2.3(2)
---
MYB46(1)
--------->
HSFB2a(2)
<---------
RAP2.6(2)
---
MYB83
<----------
DOF2
<---------
DEAR3(1)
--->
ALFIN1
------>
ZmHOX2a(2)
<---------
LBD16
->
MYB55(2)
<------
ZmHOX2a(2)
--------->
LBD16
<---------
DEAR3(2)
--
MYB46(3)
--------->
ARR14(2)
<---------
LBD16
<---------
ABI4(1)
--
DEAR3(2)
<---------
ARR14(2)
<------
ZmHOX2a(2)
<---------
ANAC58
-----
->
AtMYB77
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ANAC46
<-----
-
GAMYB
--------->
ARR11(3)
<---------
YAB1
<---------
ANAC58
-------
-
DEAR3(1)
<-----------
ARR10
<---------
ZAT6
--------->
GLK1(2)
<------
NtERF2
<--------
gggagccgtcttcttcgtcttccgacgaagatcgtagctctttcccgagtgttaagatcgagactccggagagtttcgcggcggtggattctgttccggt
9759800
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AGI:
At4g17500.1
Description:
ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor. Identical to Ethylene-responsive transcription factor 1A (ERF1A) [Arabidopsis Thaliana] (GB:O80337;GB:Q93Z36;GB:Q9SUK1); similar to ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT5G47220.1); similar to ethylene-responsive transcription factor 1A [Medicago truncatula] (GB:ABO40237.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF,
Range:
from: 9759337
to: 9760353
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.