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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                           <---------YAB1                    -------
--------------->AtSPL8     ------>ZmHOX2a(1)    ------->GAMYB                                -------
<---------------AtSPL8  <-----------GT1     <---------ALFIN1               --------->HSFB2a(2)     -
-->ZmHOX2a(1)         --------->GLK1(1) --------->ZAT2     <---------TOE2(3)           <-------TEIL-
-----MYB59           ------->TEIL       <---------ZAT2 --------->YAB1      <---------HSFB2a(2)     -
 
taatttgtactaacatttggaacgtatttcctactcttctccctgctccaactcccaaaaataagattagttagatttctataactaatatacatgtata  9758900
                                                                          ----------->GT1
                                                                         ----------->GT1
                                                                         <---------ANAC46
                   --------->AHL20(2)                                   <---------LBD16
       ----------->GT1                                                 --------->ALFIN1
--------------->AGL15                                         <---------DEAR3(2)
<---------------AGL15                                        <---------DEAR3(1)
-->ARR14(2) <-----------GT1                                 <---------MYB52(1)
-->ZAT14--------->At5g28300                              --------->DEAR3(2)
---------------->AGL1    --------->DAG2      <---------AHL20(2)<-------GAMYB       <----------ID1
---------------->AGL3   ---------->DOF2     --------->AHL20(2)<---------MYB46(3) ---------->DOF2----
---------------->AGL2--------->YAB1  <---------AtLEC2 ---------->DOF2 --------->ALFIN1  --------->MYB52(1)
 
ctcccaaaaacagtaaaaccatattaataaagctaattttgcatagatttatttcggtaaaccggcggttcaagttggggaaaaaaaagacaaacggtct  9759000
                                                                                      <---------WRKY18(1)
                                                                                     --------->WRKY12
                                                                            --------->TGA2(1)
                                                                            <---------TGA2(1)
                                                                       <---------ANAC46  ------>NtERF2
                                                                       <---------ANAC55(1)
                                                                       --------->ANAC55(2)
                                                 --------->YAB1        <---------ANAC55(2)
                                                <---------ATHB12       <---------ANAC58 <---------RAP2.6(2)
                                               ------>MYB83            <---------ANAC58--------->RAP2.6(3)
                                               ------>MYB46(1)   <---------TOE2(2)   ----------->HVH21
                                              --------->WOX13(1) <---------TOE1(2) --------->TOE2(3)
                                       <---------O2           <---------ANAC46   <---------YAB1
      ---------->DOF2                  --------->O2        <---------ANAC58 <---------bZIP60(1)
   --------->AtLEC2                   <-----------------------TaNAC69(2) ----------->HVH21     =====
------>DOF2         ---------->DOF2  --------->CCA1(2)     <---------ANAC58 --------->bZIP60(1)<----
 
aaagtcatccaaagacaaaaaaccaaagacaagttgagagagacgagaccaatcacaacattgcttcgtagattgcgtgacatcatccttgacggctact  9759100
                                --------->AHL20(2)
                           ------->MYC4
                           ------->PIF4
                           <-------MYC4
                           <-------PIF5
                           ------->PIF5
                           ------->MYC3
                           <-------MYC3
                           ------->MYC2
                           <-------MYC2     --------->TOE1(3)
                           <-------PIF4    --------->HSFC1(2)
                          --------->TGA1a  <---------HSFB2a(1)
                          <---------O2     <---------HSFC1(2)
                          <---------TGA1a ------->TEIL
                          --------->O2 --------->ANAC58
                          --------->ANAC55(2)
                          <---------ANAC55(2)
                         ------------>OsbHLH66                             --------->YAB1
                         ------->TEIL<-----------GT1                <---------MYB52(1)
                      --------->ANAC58 --------->ANAC58      --------->HSFC1(2)             <-------
                      --------->ANAC58 --------->ANAC46      --------->HSFB2a(1)            <-------
       <---------ANAC46 <------------OsbHLH66                <---------HSFC1(2)        <---------DAG2
====================================bZIP_DOF--------->TOE2(3)<---------HSFB2a(1) <-----------GT1<---
------DOF2    ----------->GT1   <---------AHL20(2)      --------->YAB1  <----------DOF2<----------DOF2
 
ttcatttgtgtcttatttggataaaacgcacgtgtttaattcacgaaccttcatagcaataagaaatttccattactttcatattttcaactttttttat  9759200
                        <-----------GT1
                    <---------AHL20(2)                 --------->LBD16
                   --------->AHL20(2)                  <---------TOE1(2)
                 --------->TOE2(3)                 <-----------GT1                            ------
               --------->AHL20(2)               <---------ARR11(3)                            <-----
               <---------AHL20(2)               <---------AHL20(1)                            <-----
--AHL20(2)     --------->AHL20(1)          ------------>CBF<-------TEIL     --------->TOE2(3)-------
--YAB1         <---------AHL20(1)          --------->AHL20(2)    ------->TEIL------------>CBF-------
--------GT1 --------->AHL20(2)  <----------DOF2 --------->AHL20(1)   <----------DOF2       ---------
 
tacccattacatgcttaaaatattaattcacaagtctttgtcaaaattcaatattttccaggttcatgaaccctttttatctcaatctactctataatat  9759300
                                                                                                 <--
                                                                                                 <--
                                                                                                 <--
                                                                             ----------->RAV1(1) ---
    --------->AHL20(2)                                                    ------>MYB83           ---
   ----------->TBP                                                   ------>MYB83                ---
--->ARR11(3)                                        <---------GLK1(1)------>MYB46(1)            ----
------ARR10                              --------->LBD16           --------->AtMYB61            <---
----ARR11(3)                          --------->MYB52(1)           <---------MYB59              ----
-->RVE1(1)                           <---------ALFIN1         --------->ANAC58                  <---
-->CCA1(1)            <----------DOF2--------->ANAC46  --------->TOE2(3)  ------>MYB46(1)  ---------
>YAB1     <----------ID1            *TSS ----------->HVH21    --------->ANAC58             ---------
 
ctccctataaattacaacaaaacctctttatttttcattcacaccggacattttgaaatctcaacaagaaccaaaccaaacaacaaaaaaacattcttaa  9759400
                            <---------GLK1(2)
                            --------->ARR14(2)
                           <------NtERF2
    <----------DOF2      <---------ANAC46
  <---------YAB1        <---------LBD16
 <---------ARR11(3)     <------NtERF2
 --------->ARR11(3)    <---------RAP2.3(1)
 <-----------GT1       ------>NtERF2
--------->YAB1         <---------RRTF1(1)
------HAHB4            <---------ERF1                                                         <-----
-------ICU4           <---------RRTF1(3)                                                      <-----
------ATHB1           <---------DREB2C(2)                                                     ------
----->HAHB4           <---------RAP2.3(3)                                                 <---------At4g35610
------>ATHB51         <---------RAP2.3(2)                                                 ------>NtERF2
------>YAB1           <---------DEAR3(1)                          --------->bZIP60(1)    <---------ARR14(2)
----->AHL20(2)        <---------RAP2.6(2)                         --------->ANAC46 --------->ARR14(2)
------ATHB51          <---------RRTF1(2)           <---------ANAC58                <---------ARR14(2)
----->ICU4           --------->RAP2.6(3)           <---------ANAC58------>NtERF2  <------ZmHOX2a(1)
------YAB1         ----------->TGA1         <---------YAB1        <---------bZIP60(1)    --------->ARR14(2)
>YAB1              ----------->HVH21  <---------YAB1             <---------------------WRI1<------NtERF2
>TOE2(3)  <---------MYB52(1)<---------ARR14(2) <----------DOF2--------->SPL7   <------ZmHOX2a(1)
 
taattatctttctgttatgtcgatgacggcggattctcaatctgattatgcttttcttgagtccatacgacgacacttactaggaggaatcggagccgat  9759500
                      --------->ARR14(2)
                      <---------ARR14(2)
                      <---------MYB52(1)
                     <-------GAMYB                                   --------->ANAC58
                    <------MYB46(1)                             --------->SPL7
       <---------ETT(2)                      <---------WRKY12 <---------SPL7                  ------
       --------->ETT(2)                    <-----------HVH21  <---------ZAT14                 ------
       ----------->HVH21              --------->ARR14(2)      --------->ZAT14                 <-----
----ARR14(2)        <------MYB83      <-----------GT1        --------->ALFIN1    <----------DOF2
----MYB52(1)        ----------->GT1   <---------ARR14(2)   <------------------SPL14          <------
--->ARR14(2)       --------->MYB59   ----------->HVH21---------->DOF2--------->ANAC58   --------->MYB52(1)
 
actcagtgagtcgacagcgagttcggttactcaatcttgtgtaaccggtcagagcattaaaccggtgtacggacgaaaccctagctttagcaaactgtat  9759600
                                                                                                 <--
                                                                                                 <--
                                                                                              <-----
                                                                                              <-----
                                                                                     ----------->HVH21
                                                                                    <-----------HVH21
                                                                               --------->ANAC58 <---
                                                                <---------TOE2(3)  <----------DOF2
                         <---------At5g28300              --------->MYB52(2)   --------->ANAC58 <---
                      --------->CCA1(2)                 <---------MYB52(1)  --------->MYB46(3)------
               <---------LBD16                      --------->GLK1(1)       --------->ANAC46--------
              --------->ALFIN1                      <---------GLK1(1)   ------>ZmHOX2a(1)   <-------
  <----------DOF2    --------->ARR14(2)             --------->CCA1(2)  --------->TOE1(3)    <-------
 <---------ANAC58    <---------ARR14(2)            --------->ARR14(2)  --------->TOE2(3) -----------
 <---------ANAC58  ----------->ARR10               <---------ARR14(2)  --------->ANAC46 --------->ANAC46
--->ARR14(2)--------->ZAT2  <-------GAMYB         <------ZmHOX2a(1) --------->ARR14(2) <---------LBD16
->TEIL      <---------ZAT2 <---------ANAC46     <---------TOE2(3)   <---------ARR14(2) <---------At5g28300
----ARR14(2)<---------At4g35610            --------->GLK1(2)    --------->ANAC46------>NtERF2<------
---CCA1(2)  --------->At4g35610           <---------GLK1(2)   <-----------GT1------->GAMYB <--------
 
ccttgcttcaccgagagctggggagatttgccgttgaaagaaaacgattctgaggatatgttagtttacggtatcctcaacgacgcctttcacggcggtt  9759700
                                                                                    --------->GLK1(2)
                                                                                   <---------GLK1(2)
   <---------RAP2.6(3)                                                             --------->ARR14(2)
  --------->RAP2.3(2)                                                              <---------ARR14(2)
  --------->RAP2.3(3)                                                            <---------MYB46(3)
  --------->DEAR3(1)                                                           <-------GAMYB
 <------NtERF2                                                                 --------->At5g28300
 --------->ATERF1(1)                                                           <------NtERF2
 --------->RAP2.3(1)                                                          <---------MYB46(3)
--------->At4g35610                                                          <---------AtMYB61
<---------At4g35610                                                          <---------DEAR3(1)
<---------ATERF1(1)                                                          <---------DREB2C(2)
-------ANAC58                                                                <---------ANAC46
-------ANAC58                                                                --------->ALFIN1
---P                                      --------->LBD16                   ------>NtERF2
----MYB52(1)                             --------->LBD16                  <---------RAP2.3(2)
---MYB46(1)                             --------->HSFB2a(2)               <---------RAP2.6(2)
---MYB83                            <----------DOF2                       <---------DEAR3(1)
--->ALFIN1                  ------>ZmHOX2a(2)                            <---------LBD16
->MYB55(2)                 <------ZmHOX2a(2)                   --------->LBD16<---------DEAR3(2)
--MYB46(3)                --------->ARR14(2)                 <---------LBD16<---------ABI4(1)
--DEAR3(2)                <---------ARR14(2)         <------ZmHOX2a(2)  <---------ANAC58       -----
->AtMYB77                 <---------ARR11(3)        --------->ARR11(3)  <---------ANAC46      <-----
-GAMYB                    --------->ARR11(3)      <---------YAB1        <---------ANAC58     -------
-DEAR3(1)                 <-----------ARR10  <---------ZAT6--------->GLK1(2)<------NtERF2  <--------
 
gggagccgtcttcttcgtcttccgacgaagatcgtagctctttcccgagtgttaagatcgagactccggagagtttcgcggcggtggattctgttccggt  9759800
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AGI:  At4g17500.1   
Description:  ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor. Identical to Ethylene-responsive transcription factor 1A (ERF1A) [Arabidopsis Thaliana] (GB:O80337;GB:Q93Z36;GB:Q9SUK1); similar to ATERF-2/ATERF2/ERF2 (ETHYLENE RESPONSE FACTOR 2), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT5G47220.1); similar to ethylene-responsive transcription factor 1A [Medicago truncatula] (GB:ABO40237.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF,
Range:  from: 9759337    to: 9760353    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.