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Chromosome 1
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Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
At4g35610
--------->
ARR11(3)
<---------
At4g35610
--------->
AtMYB61
<---------
TOE2(3)
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
MYB52(2)
<---------
YAB1
--------->
TOE2(3)
cgaacaaaaaaaaaatccaaattgatgttagctgttctgatgtctctaatttcgattaattctaccaaaacattaataacttggactacattttagttga
9311000
<-------
TEIL
<---------
At4g35610
<---------
ANAC58
---------->
DOF2
-------->
HAHB4
<---------
ANAC58
<---------
AHL20(2)
<---------
ICU4
<---------------
AGL15
--------->
TOE2(3)
--------->
ICU4
<-----------------
AGL2
------>
MYB46(1)
<---------
AHL20(2)
----------------->
AG
------>
MYB83
--------->
YAB1
<------
ZmHOX2a(1)
<---------
At5g28300
<---------
ANAC46
<---------
MYB59
<---------
YAB1
<---------
<-----------
GT1
----------------->
AGL1
--------->
AtMYB61
--------->
YAB1
--------->
At4g35610
aatttaccccttaaaaacatccaaattgggtgatacattggtgagagagaaaccaaacctcatttaaagtcataagttataataatgcagatgaggacaa
9311100
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
REM1(1)
--------->
ALFIN1
<---------
YAB1
<-----------
RAV1(1)
--------->
YAB1
<-
--------->
CCA1(2)
<---------
ICU4
<-----
--------->
ARR14(2)
-------->
HAHB4
<---------
ANAC58
<---------
ARR14(2)
----------->
HVH21
<---------
TOE1(2)
<---------
YAB1
<---------
ANAC58
--------->
ARR11(3)
--------->
ALFIN1
------>
NtERF2
--------->
ICU4
<---------
ZAT6
-
ID1
<------
ZmHOX2a(1)
---------->
DOF2
<----------
DOF2
<---------
ATHB12
--------->
MYB52(2)
atatagattaggatatggtgttgctggtaaaggtgtgaagcgactttgcctccttggtaccttgagaaatgtaatgatgaagatgatagtgttcgtggtg
9311200
--------->
CCA1(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ANAC46
<---------
MYB46(3)
<---------
ANAC46
<---------
AtMYB61
<---------
ZAT2
<---------
WOX13(1)
--------->
ICU4
--------->
ZAT2
--------->
ICU4
<---------
YAB1
--------->
At4g35610
<---------
ICU4
--------->
ANAC58
--------->
YAB1
------->
TEIL
<---------
ATHB12
--------->
ANAC58
<---------
ICU4
-----
ZmHOX2a(1)
<---------
TOE2(3)
<------------
CBF
--------->
ANAC46
--------->
ATHB12
----
ANAC46
<---------
MYB46(3)
<---------
At4g35610
--------->
ATHB12
--------->
AHL20(2)
<---------
YAB1
aggatgatgatggtggatatagaggttatgaagctgagtgggaagaagagttattggcccataattctaaaaatatacgacagccattttgaatgatttc
9311300
--------->
LBD16
<---------
LBD16
--------->
MYB52(2)
--------->
MYB59
<---------
ARR14(2)
----------->
ARR10
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
MYB52(1)
---------->
DOF2
--------->
LBD16
<--------
P
--------->
MYB46(3)
--------->
HSFB2a(2)
<-------
GAMYB
--------->
ANAC55(2)
--------->
GLK1(1)
--------->
ARR14(2)
--------->
At5g28300
<---------
ANAC58
--------->
ANAC46
<---------
HSFB2a(2)
----------->
GT1
<---------
ANAC58
--------->
ANAC58
----------------->
AGL1
--------->
MYB52(1)
<---------
ANAC46
--------->
ANAC58
<---------
LBD16
<---------
CCA1(2)
--------->
TOE2(2)
<---------
ANAC55(2)
<---------
GLK1(1)
<---------
ARR14(2)
------->
TEIL
aactaaacatacggttagttccggtttatattcagtttcgtaaccaaagaaaaacgcaaatcccaaattttccggaa
atggaggaatatttgaatcttat
9311400
--------->
ANAC58
<---------
CCA1(2)
--------->
ANAC58
--------->
YAB1
---------->
DOF2
<------
ZmHOX2a(2)
<
--------->
GLK1(2)
<---------
WRKY38(1)
----------->
GT1
<---------
GLK1(2)
--------->
AtLEC2
<---------
WRKY12
<-----------
HVH21
<
---------->
DOF2
<---------
ZAT6
<---------
AtMYB61
<----------
DOF2
--------->
LBD16
<
gttgaaagcgagagagattcttgttagtgaaagccatgaagaagtagcgatggtcatcgatcatctctttaagcgtcaagactccgaagagtataaaaca
9311500
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
SPL7
<---------
SPL7
<----------
DOF2
--------------->
AtSPL8
<---------------
AtSPL3
--------->
At4g35610
<-----------
RAV1(2)
<---------
At4g35610
<---------
ANAC46
--------->
TOE2(3)
--------->
ZAT18
<---------
ANAC58
--------->
TOE1(3)
--------->
ZAT14
<---------
ANAC58
--------->
ZAT6
<---------
ZAT14
--------->
ARR14(2)
<---------
ANAC58
<---------
ZAT18
<---------
ARR14(2)
<---------
ANAC58
--------->
SPL7
<---------
ANAC58
<--------
P
---------
ANAC46
<---------
ANAC58
--------->
ZAT2
---------->
DOF2
--------->
WOX13(1)
---------
ANAC58
<---------
At4g35610
<---------
TOE2(2)
--------->
WOX13(1)
---------
ANAC58
--------->
At4g35610
<---------
TOE1(2)
---------->
DOF2
tcgcgtgcgctgtacgacatctgcgtttcttgtaacccaggttgcttaaccctaaagcttcttaaagtctatcaatcttcttccagtggcattctcagac
9311600
<---------
GLK1(2)
--------->
ARR14(2)
------>
MYB46(1)
<---------
ARR14(2)
<---------
ARR14(2)
<-----------
GT1
--------->
WOX13(1)
--------->
ARR14(2)
--------->
ARR14(2)
<-
<---------
ATHB12
------>
MYB83
<---------
ARR14(2)
<----
<------
ZmHOX2a(2)
<---------
ALFIN1
<---------
TOE1(2)
<-----
tccgatcaatctctcaactctctgagaccctcacctatctgaaaaatcaaatcgtattttccaaattctctctcgactctctctatgaaatcaaacccct
9311700
------>
ZmHOX2a(2)
=============
HOX2a_HOX2a
<------
ZmHOX2a(2)
==============
HOX2a_HOX2a
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ARR14(3)
--------->
ARR14(3)
<---------
ARR14(2)
<---------
ARR11(3)
----------->
HVH21
--------->
At4g35610
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
GLK1(2)
<-----------
RAV1(2)
<---------
ARR14(2)
<---------
LBD16
<---------
GLK1(2)
------>
ZmHOX2a(1)
<-
---------->
DOF2
--------->
ARR11(3)
----
<---------
AHL20(2)
<---------
MYB52(2)
--------->
AGP1
<---------
ANAC58
--------
YAB1
--------->
ANAC58
----------->
ARR10
<----------
DOF2
<---------
ANAC46
------
DOF2
--------->
ANAC58
<---------
bZIP60(1)
<---------
ANAC58
<---------
bZIP60(2)
----
DAG2
--------->
ANAC46
--------->
bZIP60(1)
<---------
ANAC58
<---------
ANAC58
tttgattttatgccttacaatgcaagaaaccaaagaatctgacatcaagatcctcaggaaaatcgtgtcttttgtaacttacaatgtcgtggagttgcat
9311800
--------->
O2
<---------
O2
--------->
ANAC46
----------------------->
TaNAC69(2)
------->
TEIL
------->
TEIL
================
bZIP_DOF
<---------
MYB46(3)
--------->
GLK1(2)
--------->
TGA1a
--------->
At5g28300
--------->
ARR11(3)
--------->
ANAC55(2)
<-----
<---------
DEAR3(1)
<---------
MYB52(2)
<-----------
GT1
------>
ZmHOX2a(2)
<----------
ID1
<---------
CCA1(2)
=================================
bZIP_DOF
------>
NtERF2
---------
ID1
--------->
ZAT2
---------->
DOF2
<----------
DOF2
<---------
ARR14(2)
------>
DOF2
<---------
ZAT2
<---------
ANAC46
<-----------
HVH21
--------->
ARR14(2)
aaagacaaatgggacgagctcggtgattgtatcttatccctagcgagtagcaaagaacctgtcaaggcttttcacgtcttcatcgatctgccaccagtct
9311900
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AGI:
At4g16530.1
Description:
binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37410.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G37920.1); contains InterPro domain Protein of unknown function DUF577 (InterPro:IPR007598)
Range:
from: 9311378
to: 9315835
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.