Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------ZAT14                                                              --------->ZAT14     ------>ZmHOX2a(2)                                                                 <---------ZAT14     ==========================HOX2a_HOX2a                                        ------>ZmHOX2a(2)    <------ZmHOX2a(2)                                                            <------ZmHOX2a(2)    ===========================HOX2a_HOX2a                                       --------->CCA1(2)    --------->CCA1(2)                                                           --------->ARR11(3)   <---------AGP1                                                               --------->ARR14(3)   --------->AGP1--------->ANAC55(2)                                            <---------ARR14(3)   --------->ARR11(3)                                                           --------->ARR14(2)   <---------ARR14(3)                --------->YAB1                             <---------ARR14(2)   --------->ARR14(3)             --------->YAB1                                <---------ARR11(3)   <---------ARR11(3)        <---------TOE1(2)                                  --------->AGP1<------   <---------ARR14(2)   ------>ZmHOX2a(1)                                       <---------AGP1<------   --------->ARR14(2)  --------->TOE2(3)      <---------GLK1(1)           ==============HOX2a_HOX2a -YAB1    --------->ZAT14    ------->TEIL---------->DOF2                  ------>ZmHOX2a(1)   ------- ------AGL3      <---------ANAC55(2)<---------YAB1     <------NtERF2      ===============HOX2a_HOX2a   ggcaagatctagtatagtcacttatcctttgtacgtttataatcaaagagttctggccgaagcacatacaaatttcctccaagatctagtatagtcagct  8669100                                                <----------DOF2             ----------->GT1                                  ---------->DOF2                           <-------GAMYB            --------->ZAT6   ----------------->AGL3   <---------ALFIN1     ----------->GT1         --------->YAB1      <-----------------AGL3--------->ANAC46        --------->MYB111(2)  <----------DOF2           ------>NtERF2      <---------DAG2              <---------MYB46(3) ---At4g35610              <---------PCF2  ------>ZmHOX2a(1)            <------MYB46(1)  ----------->GT1 ---ZAT2 <---------ICU4    <---------PCF5 <---------ANAC58              <------MYB83    --------->DAG2 -->At4g35610         --------->MYB52(1)  <---------ANAC58      --------->ANAC46       ---------->DOF2   tatacttttaatcaacactcagactaatggggccattaaagggtccttgcctttcgccactggtccaaggcgctaggttgttaaaaaaaaaaagttattt  8669200                 <-------TEIL             --------->AHL20(2)             <---------AHL20(2)          --------->YAB1                                                                    ---------          --------->AHL20(2)                                                               --------->HSFB2a(2)    --------->ANAC55(2)                                                                    <---------HSFB2a(2)    --------->ANAC58                                                                      <---------LBD16    --------->ANAC46                                     --------->ARR11(3)              <---------At5g28300    --------->ANAC55(1)    <---------YAB1                <---------ARR11(3)              --------->MYB52(1)    --------->ANAC58     --------->YAB1              ---------->DOF2         ------>ZmHOX2a(2)      -    <---------ANAC55(2) <---------YAB1       --------->TOE2(3)               --------->ETT(2)    ----   gcatacacgtaataaaaaattcatgtattatagttgaactcttgaaacattagccaaaagatgttaactcaaacagtgatcgacagtgagttaccggaag  8669300                 <---------ICU4      <---------DOF5.7(2)    --------->DOF5.7(2)   --------->TOE2(3)         --------->HSFB2a(1)   --------->TOE1(3)         <---------HSFB2a(1)  <---------ANAC55(2)        --------->HSFC1(2) >LBD16         <---------YAB1             <---------WOX13(1)                          <----------DOF2 -------->MYB52(1)           <---------HSFC1(2)                              ---------->DOF2 ----->YAB1     --------->ICU4          <---------YAB1                   ---------->DOF2          ---   cataacgtaaacgggaacataattaagaagaagcttctcgttgtaattggtagccatttttcttctaaatacaaacaaagaaagaacgtctttttttttt  8669400                                                           <---------O2                                                           --------->TGA1a                                                           ===========================bZIP_DOF                                                           <---------TGA1a                  ---------                                                           ==========================================bZIP_DOF                                                           --------->O2                     <--------                                                           =======================bZIP_DOF<----------DOF2                                --------->ANAC58      <---------At4g35610                 -----------                       <------ZmHOX2a(1)              --------->At4g35610     <---------At4g35610                  <---------ANAC46                <---------REM1(1)           --------->At4g35610                  <---------REM1(1)    <---------YAB1------->TEIL      ---------->DOF2   <-----------                <---------ZAT14 --------->ANAC58----------------------->TaNAC69(2)     <---------ARR11(3) ------->ID1   --------->ALFIN1 --------->ANAC46--------->At4g35610   *TSS ---------->DOF2<----------   gtttttttgttgagagagtgttgtaggaaaatataagcaatatgagtagtagatgaagctcacatgtctctcttaaagaaagctcacgagctctttatat  8669500                                    --------->ZAT18                     <---------MYB46(3)                    --------->ALFIN1<---------ZAT14        --------->ARR11(3)          --------->ZAT14                   --------->At4g35610         <-- >AHL20(2)          <---------AtMYB61                     --------->ZAT18                         <-- ---TBP <---------ARR11(3)<---------YAB1                  <---------ZAT14           <------ZmHOX2a(1) ---->AGL15     <---------ANAC58  <---------------AtSPL8  --------->ZAT14         <---------TOE2(3) - ------AGL3     <---------ANAC58 <---------ANAC46     <-----------RAV1(1)  <-------TEIL----------->GT1 -----AGL15   <---------YAB1 <---------YAB1 ------>ZmHOX2a(2)         <---------At4g35610   ---------   agaagtagatgatattatgcgagtggttgtgatttttgtgtactgatctaaaacgactggtgctctgttttcagcggtccatttgaggattgtataatga  8669600                              ---------->ID1                          <---------ANAC58                          <---------ANAC58                     <------NtERF2                   --------->GLK1(2)         --------->ATHB51    <---------ZAT18  --------->ATERF1(1)        ------>ZmHOX2a(1)             <---------YAB1   <-----------GT1 <---------RAP2.6(2)          --------->LBD16       <----------DOF2         <------ -------DAG2       <---------ANAC58           ----------->RAV1(2) <-----------GT1       <-------TEIL --------DOF2      <---------ANAC46    <-----------TGA1         --------->YAB1<---------AHL20(2)  <-- -------->ATHB12   <---------ANAC58<----------DOF2  <---------GLK1(2) <---------DAG2<---------TOE2(3) >YAB1            ---------->ID1 ------>ZmHOX2a(1)----------->ARR10  <---------DAG2 <---------TOE1(3)   ctttattgccctctgtttttggcgtcttccttgtcctctttcgtcatttcctgagattctttggaatgatacctttttctataattgaggttcaccgatt  8669700                                                                             <---------ANAC46                                                                          --------->ALFIN1                                   <------NtERF2                         <-------MYC4                                  --------->ORA47(1)                     ------->PIF5                                  ------>NtERF2                          <-------PIF5                                 <---------ATERF1(2)                     ------->MYC4                                 --------->ATERF1(2)                     ------->MYC3                                 --------->DEAR3(1)                      ------->PIF4                                --------->ATERF1(1)                      ------->MYC2                               <---------ATERF1(1)                       <-------PIF4                              --------->ANAC46                           <-------MYC3                             --------->MYB46(3)                          <-------MYC2                          <---------ALFIN1                              <---------TGA1a     <---------ETT(1)    <------NtERF2                                  --------->O2     --------->ANAC46   ------>NtERF2                                   --------->TGA1a    --------->ARR11(3) --------->GLK1(1)     --------->ETT(2)                  <-----------RAV1(1) ----------->GT1 <---------GLK1(1)  <---------REM1(1)    =========================================bZIP_DOF <---------ARR11(3) ---GLK1(2)      <-----------RAV1(1)     <----------DOF2<-------MYC3    <---------O2      --------->YAB1 -------YAB1--------->ATHB12<---------ALFIN1            ------->MYC3   ------------>OsbHLH66<--------   ttgatttccgacactgattgtgttgtcgccactcgccggccttctttttgtttctccatgtgttgtttttaagcacgtggagtaaatgcaaatgatattt  8669800                                <---------------AGL15                                --------->TOE2(3)                                --------------->AGL15                                --------->TOE1(3)                               ----------------->AG                               <-----------------AGL3                               <-----------------AG                                                 <                               ----------------->AGL1                                               <                               ----------------->AGL2                                              --                               ----------------->AGL3                                              --                      <---------ARR14(2)                                                           --                      --------->ARR11(3)    <---------At4g35610     <---------ZAT6             <-----                     <---------CCA1(2) <---------ANAC55(2)     --------->TOE1(3)             --------                 --------->AtLEC2     <---------ICU4        <-----------GT1                 <-------- -YAB1      <-----------GT1  <-----------GT1--------->At4g35610--------->TOE2(3)           --------->AHL20(2)   gttcatgtctgtattcaccattcaaatcttgttaccttaataagtaagctcaatgtcaaaatttaccttagtgttgatgtcttacaacttgaatattata  8669900                                  <---------WOX13(1) ------MYB46(1)                ----------->HVH21 ------MYB83                   --------->ALFIN1                                      --------------->AGL15 ------->MYB111(1)           <---------ANAC46                                <---------MYB52(1) ------->MYB111(2)         <------MYB83 <---------AHL20(2)              <---------ARR11(3) ------->MYB46(2)          <---------ANAC46                             <---------ARR14(2) ----YAB1                  <------MYB46(1)                              --------->ARR14(2) ->YAB1                    <---------ANAC58                             --------->GLK1(2)    <------- -YAB1   <---------ANAC46  <---------ANAC58     ----------->GT1    ----------------->AGL1    --------   gtaggtggattatgtggatgtcaaaaatttggtgtgatggattttataaatcgtgaaaataaactggagtccaaaatctgtaagttactaagttgagcta  8670000  Previous    Next  AGI:  At4g15210.1    Description:  ATBETA-AMY (BETA-AMYLASE); beta-amylase. Identical to Beta-amylase (BMY1) [Arabidopsis Thaliana] (GB:P25853;GB:O23375); similar to BAM6/BMY5 (BETA-AMYLASE 6), beta-amylase [Arabidopsis thaliana] (TAIR:AT2G32290.1); similar to Beta-amylase (1,4-alpha-D-glucan maltohydrolase) (GB:O65015); similar to beta-amylase [Glycine max] (GB:BAA09462.1); similar to Beta-amylase (1,4-alpha-D-glucan maltohydrolase) (GB:O64407); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain Glycoside hydrolase, catalytic core; (Inte Range:  from: 8666338    to: 8669470    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.