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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
<---------
ARR14(2)
<---------
RVE1(1)
--------->
ARR14(2)
<---------
CCA1(1)
--------->
GLK1(1)
<---------
ARR11(3)
<-------
TEIL
<---------
GLK1(1)
--------->
ARR11(3)
-->
ZmHOX2a(2)
--------->
ZAT6
--------->
YAB1
--------->
YAB1
------->
TEIL
----
ARR11(3)
----------->
RAV1(1)
<---------
YAB1
------>
ZmHOX2a(2)
<---------
CCA1(2)
--
ctatatgatcaacatgtccaacactagtttcattttttctactatgatatccgatgatccaatctgaactatacaaaatgtatctagatattttcttgaa
8360700
<---------
ANAC46
--------->
ALFIN1
====================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<---------
ANAC58
<---------
ARR11(3)
-----
<---------
ANAC46
--------->
HSFB2a(2)
<-----
--------->
MYB52(1)
<---------
ANAC58
<------
ZmHOX2a(1)
<--------
--------->
LBD16
------>
MYB46(1)
<----------
ID1
--------->
ARR11(3)
<----------
------->
WOX13(1)
------>
MYB83
<---------
AtMYB61
<---------
HSFB2a(2)
<---------
YAB1
tcaatccgaataacgaatagttgcaaaacataaacctagcgtgatcgtgtggtagaaggacgaaggtcgagaagttctcttactcttatgattttctctt
8360800
<---------
At4g35610
<---------
ZAT2
--------->
At4g35610
--------->
ANAC46
--------->
ANAC55(2)
--------->
ANAC58
--------->
ANAC58
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
------>
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
ARR14(2)
--------->
ARR11(3)
--------->
LBD16
--
----------->
HVH21
<---------
AGP1
--------->
ZAT2
<-
--------->
WRKY12
<---------
ARR11(3)
<---------
ANAC46
--------->
LBD16
---->
ZAT14
--------->
MYB52(1)
--------->
SPL7
<---------
ICU4
<---------
ATERF1(1)
-----
DOF2
--------->
ARR11(1)
<---------
SPL7
<------
NtERF2
<-------
GAMYB
------>
NtERF2
---
GT1
---------->
DOF2
<---------
ARR14(2)
<---------
LBD16
<------
ZmHOX2a(1)
--------->
RAP2.6(2)
-
GT1
--------->
WRKY38(1)
<------
ZmHOX2a(1)
------->
GAMYB
<---------
ATHB12
---------->
DOF2
--
tactcatttgaccgtaagagaaagaaacggctaggatctcgcgtacgcaactggcggagacaaatcaggaccgttgaaaataagaaagaagccgcgtcca
8360900
<---------
ICU4
--------->
ICU4
<---------
YAB1
<----------
DOF2
--------->
ANAC46
<---------
DAG2
--------->
bZIP60(2)
<---------
ALFIN1
------>
NtERF2
--------->
PCF2
--------->
ANAC46
<-----------
HVH21
--------->
LBD16
------
<----------
DOF2
------>
ZmHOX2a(1)
<-----------
TGA1
------
------->
ARR11(3)
<---------
ANAC58
----------->
HVH21
<---------
ARR11(3)
-------
--------
ARR11(3)
<---------
ZAT18
------>
NtERF2
<---------
ETT(1)
--------->
ARR11(3)
<--------
------->
GLK1(2)
---------->
ID1
<---------
ANAC58
--------->
LBD16
<---------
CCA1(2)
--------->
DOF5.7(2)
aaatctttgtgtcccacctttgtccccttgcctctaacttgcctcctcatgctccccgacaacgtcataattcatatctctctctctctctcgttaaccc
8361000
--------->
ANAC58
--------->
ANAC58
----------->
TBP
--------->
ANAC46
<-----------
GT1
--------->
AHL20(2)
------->
GAMYB
--------->
YAB1
---------->
DOF2
<---------
AHL20(2)
*
TSS
--------->
ANAC58
--------->
GLK1(1)
--->
TOE1(3)
----------->
TBP
--------->
ZAT14
<---------
GLK1(1)
--->
TOE2(3)
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ARR11(3)
-->
ZAT6
--------->
TOE2(3)
--------->
ANAC46
<---------
TOE2(3)
---------
-
DOF5.7(2)
<----------
DOF2
<---------
ICU4
--------->
ANAC58
--------->
ARR11(3)
taatttcaaagcatctttccttatataaatctctctctctccctcaccattac
acaacacacacaagcattttcaaggatatcaaatcacaatcccaaga
8361100
<---------
ZAT14
--------->
ZAT14
<---------
TOE2(3)
<---------
DOF5.7(2)
--------->
DOF5.7(2)
<---------
At4g35610
--------->
ARR11(3)
<---------
ARR11(3)
<<<<<<<<<<<<<<<<<
LFY
<------
ZmHOX2a(1)
---------->
DOF2
--------->
ARR14(2)
---
--------->
YAB1
<---------
TOE1(3)
<---------
MYB52(1)
<---------
ARR14(2)
---
------>
AGL15
>>>>>>>>>
TBF1
<---------
TOE2(3)
<-------
GAMYB
--------->
GLK1(2)
<-------
agagcaataacaagagaagaagaagtagttcaagaattaaggaagagagcttctccgttaaagtatagtgagagaat
atggaagtcaccaatgggcttaa
8361200
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
At4g35610
--------->
At4g35610
<-----------
RAV1(2)
===================
RAV
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<----------
DOF2
-------
--------->
HSFB2a(1)
--------->
MYB46(3)
<---------
HSFC1(2)
---------->
DOF2
<---------
HSFB2a(1)
--------->
REM1(1)
<------
ZmHOX2a(1)
--------->
LBD16
--------->
HSFC1(2)
--------->
MYB46(3)
------>
TOE2(3)
--------->
ANAC46
<---------
ARR11(3)
----------->
RAV1(1)
-----
------>
TOE1(3)
<---------
MYB52(1)
<<<<<<<
ZML2
<-----------
HVH21
--------->
ANAC58
---
DOF2
<-------
TEIL
<---------
LBD16
--------->
MYB46(3)
<-----------
TGA1
--------->
ANAC58
ccttaaggacacagagcttcgtttgggattacccggagcacaagaagaacaacaactagaactttcttgcgtcagaagcaacaacaagcgcaagaacaac
8361300
---------->
DOF2
------>
ZmHOX2a(1)
----------->
HVH21
=========================
HOX2a_HOX2a
========================
HOX2a_HOX2a
----------->
RAV1(2)
--------->
CCA1(2)
============================
HOX2a_HOX2a
------>
ZmHOX2a(1)
--------->
At4g35610
===========================
HOX2a_HOX2a
<
===============================
HOX2a_HOX2a
---
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
---
--------->
ARR14(2)
--------->
AGP1
<--
<---------
ARR14(2)
--------->
ARR11(3)
----
<-----------
ARR10
--------->
ARR14(2)
<---
--------->
GLK1(2)
<---------
AGP1
<---
<---------
GLK1(2)
---------->
DOF2
------>
ZmHOX2a(2)
------
------->
GAMYB
<---------
ALFIN1
<---------
ARR14(2)
--------->
ZAT14
--------->
MYB52(1)
==============================
HOX2a_HOX2a
<---------
ZAT14
----------->
RAV1(1)
<---------
ALFIN1
<---------
ARR11(3)
<---------
ZAT18
-->
MYB52(1)
--------->
At4g35610
<---------
GLK1(1)
-------------
---->
MYB46(3)
<---------
At4g35610
----------->
ARR10
--------->
AHL20(2)
--------->
WOX13(1)
gactcaacagaagaatctgctcctcctcctgcaaa
gtaagttgagatctgaaagttatagttttaatatccaaacttcttgatatcaatcggtgtactaa
8361400
--------->
ATHB12
--------->
YAB1
------->
TEIL
---------
YAB1
------>
YAB1
------->
GAMYB
----->
HAHB4
--------->
MYB52(1)
-------
ICU4
------>
ZmHOX2a(2)
----->
ICU4
<---------
AtLEC2
<---------
ARR11(3)
----
------
ATHB12
<---------
MYB46(3)
<------
ZmHOX2a(2)
<-------
------
ATHB51
--------->
MYB55(2)
--------->
CCA1(2)
<-------
--->
YAB1
--------->
ATHB12
--------->
AGP1
<---------
ANAC55(2)
-->
AtSPL8
<---------
ATHB12
--------->
ARR11(3)
----------->
RAV1(1)
------
taatgaatcttgatttgtaaacttcag
aacacaaatcgttggatggcctccagtgagatctaaccgtaagaacaacaacaacaaaaacgtgagttatgtg
8361500
--------->
LBD16
--------->
ANAC46
<---------
LBD16
<---------
ARR11(1)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
<-----------
ARR10
<---------
ARR14(2)
<---------
CCA1(2)
<---------
ZAT2
------>
ZmHOX2a(2)
--------->
ZAT2
--------->
SPL7
<---------
ARR11(3)
---------->
DOF2
<---------
At4g35610
<------
ZmHOX2a(2)
--------->
HSFB2a(2)
------>
DOF2
<---------
GLK1(1)
--------->
ARR11(3)
<---------
HSFB2a(2)
-
--
ANAC46
<---------
DEAR3(1)
<---------
MYB52(1)
<---------
ARR11(3)
<---
--
ANAC55(2)
--------->
GLK1(1)
<---------
AGP1
<-----------
ARR10
----
----->
HVH21
--------->
At4g35610
<---------
ARR11(3)
--------->
LBD16
----
aaagtgagtatggacggagctccatatctccgtaagatagatctcaagatgtacaaaaactatccagagcttctcaaagcactagagaacatgttcaagt
8361600
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AGI:
At4g14560.1
Description:
IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE); transcription factor. Identical to Auxin-responsive protein IAA1 (IAA1) [Arabidopsis Thaliana] (GB:P49677;GB:O23312); similar to IAA2 (indoleacetic acid-induced protein 2), transcription factor [Arabidopsis thaliana] (TAIR:AT3G23030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71286.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525)
Range:
from: 8361054
to: 8361982
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.