Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <-----------ARR10                ------->TEIL                <---------ARR14(2)           <---------At4g35610           --------->At4g35610                                                           --------->ZAT6         <XXXXXXXXXXXXXXXXXXXXMIR835-3P                                        --------->GLK1(2)      <----------DOF2      --------->YAB1                      <----------DOF2<---------GLK1(2) ---------->HVH21     ------------>CBF                     <----------DOF2    --------->ARR11(3) ------>TGA1a   --------->ARR14(2)              ------>ZmHOX2a(1)             <---------ARR11(3) -------TGA1a  <---------CCA1(2)        <----------DOF2  <---------At4g35610 <---------RVE1(1)   tcgtgactctttcttctgaatcttctcaatcgaaattcttctctttagtcctcccattctgctttctttgatttcacagagattttgagggacactacct  8344200                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                <---------MYB46(3)        <---------CCA1(2)                                                               <---------AtMYB61        <---------ANAC55(2)                                                              <-------GAMYB             --------->ANAC55(2)                                                              <---------MYB52(1) ====================                                                             <---------DEAR3(2)  ------>ZmHOX2a(2)                                                            <---------DEAR3(1)  <------ZmHOX2a(2)                                                            <---------DREB2C(2) =====================                                                            <---------At1g77200<---------ARR11(3)                                                            <---------DEAR4(1) --------->ARR11(3)                                                           --------->DDF1 =============HOX2a_HOX2a                  ------->TEIL  --------->TOE1(2)         <-----------HVH21    <---------ARR14(2)    <----------DOF2       --------->ANAC58               <-----------RAV1(1)   --------->ARR14(2)  --------------->AGL15   --------->ANAC58           <---------AHL20(2)   ==============HOX2a_HOX2a  <---------------AGL15   --------->ANAC46         <---------AHL20(2)     <------ZmHOX2a(1)<---------   ctctctctttatagatagtgtatgtaacaagaaacctagaaacaattgtatatataaaaatgtcggtggttttataggagggatctaggcccgtatcagg  8344300                                                        --------->GLK1(2)                                                     <---------AHL20(2)                                                 --------->AHL20(2)                                                --------->AHL20(2)                                                <---------AHL20(2)                                                <---------AHL20(1)                          ---------->ID1   <---------ATHB12 ================HOX2a_HOX2a        ---------->ID1   --------->AHL20(2)                          ---- ================HOX2a_HOX2a   <----------DOF2  --------->AHL20(1)                               <--- --HVH21  <------ZmHOX2a(1)<-----------------AGL1<---------AHL20(2)                     <---------YAB1   cccattgcaagaggaaattcaaaattttgtcttcttttggcccaaatcaatttaataaaatctgaattaggggttttgttttttgatttcatgatataaa  8344400                                                 <---------ICU4                                                 ---------->DOF2                                              --------->YAB1          <---------ARR14(2)          --------->DAG2                     <---------YAB1      --------->MYB52(1)         ---------->DOF2                     <---------------AGL15    --------->ARR14(2) ----->ANAC46         <-----------GT1      --------->YAB1  ----------->GT1 -------ID1   <-------TEIL              <----------DOF2 --------->MYB52(1)                      <----   cgacaaaaaccaaaagtacatatataaccagaactcaagagtcttttataataaaggcaaaccgaaaaaacagaaccggttatcaagtctctctcttcct  8344500                                                                        <---------YAB1                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                   <---------bZIP60(1)                                                                 <-----------HVH21                                                               <-------MYC2                                                               <-------MYC3                                                               ------->MYC3                                                               ------->MYC2                                                               ------->PIF5                                                               <-------PIF5                                                               ------->MYC4                                                               <-------MYC4                                                              =======================================                                                              >>>>>>>>>>HY5              ------>ZmHOX2a(1)                                                              --------->ANAC55(2)    <-----------GT1                                                              <---------TGA1a      <---------YAB1                                                              --------->O2       <---------ICU4                                                              --------->TGA1a    <--------HAHB4                                                              <---------O2      <---------YAB1                                                            <------------OsbHLH66--------->YAB1                             --------->TOE2(3)              <---------ALFIN1 <---------YAB1                          --------->YAB1                 ===============MYC_MYB --------->ICU4                         --------->ICU4                <---------MYB111(1) --------->CCA1(2)       --                       --------->YAB1   ------------>CBF -------->P--------->bZIP60(1)   ============                    ----------->GT1    --------->ANAC58<---------MYB52(2) <---------ARR14(2)     ---- ------DOF2     <---------ALFIN1       --------->ANAC58--------->MYB46(3) --------->ARR14(2)     ----   tttctatccaaataacatccacttgtaataatcttatcgacaaacaatcgacctataactacccacgtgtcatcacgatacgattattatcctctctgat  8344600            *TSS     --------->ANAC58     --------->ANAC58                                         <---------ARR14(2)    ------->TEIL                                              <---------GLK1(2)  ------->GAMYB                                               --------->ARR14(2) --------->MYB46(3)                         ------>ZmHOX2a(1)<------NtERF2                   <------- <---------MYB52(2)                         --------->HSFB2a(2)      <---------WRKY38(1)============= =========MYC_MYB                 <----------DOF2          <---------ANAC58         --------->ZAT18 ------->MYB52(1)                <---------DAG2            <---------ANAC58        <------ZmHOX2a(1)< ===HOX2a_HOX2a             --------->HSFB2a(2)            <---------ANAC46     <------ZmHOX2a(1)  <- ----->MYB46(3)             <---------HSFB2a(2)    ---------->DOF2   <---------WRKY12   ---------->DOF2 -->ZmHOX2a(2)          <----------DOF2---------->ID1     <---------LBD16    <-----------RAV1(2)   --   ccaacggacccaaaacatctatctctctttctcgaccttttgtctcctcgatctaaagatggcggattcggacaacgattcaggaggacacaaagacggt  8344700             <-------MYC2             ------->MYC2             ------->MYC3                               --------->YAB1             <-------MYC3                              ==========================HOX2a_HOX2a            <---------TGA1a                           <---------ARR11(3)            --------->ANAC58                         <------ZmHOX2a(1)            --------->bZIP60(2)                    <---------TOE1(2)            <---------O2                         --------->At4g35610            --------->TGA1a                   --------->DOF5.7(2)            --------->O2                     --------->TOE2(3)            --------->ANAC58                 --------->TOE1(3)            --------->ANAC55(2)            <---------TOE1(3)            <---------ANAC55(2)            <---------TOE2(3)                           <---------ARR11(3)          <---------ALFIN1                <---------DOF5.7(2)                   --------->ANAC58          <------------OsbHLH66           --------->MYB52(1)     --------->ANAC58      --------->GLK1(2)       ----------->HVH21              ======================HOX2a_HOX2a         --------->ANAC58 --DEAR3(1) --------->ANAC46          ------>ZmHOX2a(2)<------ZmHOX2a(2)  ------>ZmHOX2a(1) =====================bZIP_DOF       <------ZmHOX2a(2)--------->ARR11(3) --------->TOE2(2)      <---- ---------GLK1(1)              <-----------GT1<---------MYB52(1) --------->ANAC58      --------->ARR11(3) --------ARR14(2)        <------MYB83=======================HOX2a_HOX2a  --------->TOE1(2)    <------ ------->ARR14(2)        <------MYB46(1)--------->DOF5.7(2)    ---------->DOF2 --------->SPL7 <------   ggaaatgcttcgacacgtgagcaagataggtttctaccgatcgctaacgttagcaggatcatgaagaaagcacttcctgcgaacgcaaaaatctctaagg  8344800                                                                                                    -                                                                                                  ---                                                                                               ------                                                                                              <------                                                                  <---------O2               <-------       --------->MYB52(1)                 <-------TEIL       ----------->HVH21              ---------      --------->ARR11(1)          --------->YAB1           --------->At4g35610              ---------  ---------->DOF2              --------->GLK1(1)           <---------At4g35610       <------ZmHOX2a(1) --ZmHOX2a(1)                  <---------GLK1(1)    --------->ALFIN1                 ================ ---TOE2(3)              <---------ARR14(2)        <-----------HVH21 <-----------HVH21     --------->WOX13(1) ---TOE1(3)              --------->ARR14(2)     <---------LBD16   --------->O2       ================   atgctaaagaaacggttcaagagtgtgtatcggaattcataagtttcatcaccggtgaggcttctgacaagtgtcagagagagaagaggaagacaatcaa  8344900       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->ARR14(3)     <---------ARR14(3)     <---------ARR14(2)     --------->ARR11(3)     --------->ARR14(2)   --------->ANAC58     <---------ARR11(3)   --------->ANAC58                                            --------->ALFIN1 ---------->HVH21   --------->WRKY38(1)                                             <------MYB46(1) ---->GAMYB       --------->At4g35610                                               <------MYB83 --->MYB52(1)     <---------At4g35610                                               <---------ANAC46 ---WRKY38(1)    <---------DEAR3(1)                                                <----------------- --ATHB12  <----------DOF2--------->ANAC46                                         <---------AtMYB61 >ANAC58  xxxxxxxxxxxxxxxx>smallRNA(i)                                             --------->ALFIN1 >ANAC58  xxxxxxxxxxxxxxxx>smallRNA(s)         --------->ALFIN1                    <---------DEAR3(1) =============HOX2a_HOX2a<---------ZAT14     <---------ANAC46                      --------->MYB111(2) ============HOX2a_HOX2a --------->ZAT18<------ZmHOX2a(1)               ---------->DOF2     <------ZmHOX2a(1)   cggtgacgatcttctttgggcgatgactacgctagggtttgaggactacgtggagcctctcaaggtttatctgcaaaagtatagggaggtggaaggagag  8345000                                                      <---------At4g35610                                                      --------->ZAT2                                                      <---------ZAT2                                                  --------->ALFIN1                                                 <------NtERF2                                                 --------->ATERF1(1)                                                <---------MYB46(3)                                               <---------DEAR3(1)                                               --------->ALFIN1                                <-----                                              --------->ATERF1(1)                         <---------MYB46(3)                                           <------ZmHOX2a(1)                              --------->ABI4(2)                                           --------->ATERF1(1)                           --------->ALFIN1                                         --------->ALFIN1                          <---------SPL7               <----------ARF1          <------ZmHOX2a(1)                  --------->At4g35610 <-----               <----------ID1      --------->ALFIN1   --------->At4g35610  <---------At4g35610 <-----            <------NtERF2        <------MYB46(1)<---------ORA47(2)         --------->ZAT2<---------DEAR3(1)          <-----------RAV1(2)    <------MYB83 <---------ABI4(1)            <---------GLK1(1)   <-----       --------->ANAC58         <---------AtMYB61<-------GAMYB             --------->GLK1(1)  <------NtERF2       --------->ANAC46       <------ZmHOX2a(1)<---------DREB2C(2)         <---------ZAT2<---------AtMYB61       --------->ANAC58     --------->ANAC58--------->ALFIN1             <------ZmHOX2a(1)--------->MYB55(2)      <---------LBD16       <---------TOE2(3) <------NtERF2         --------->ALFIN1 ------->TEIL --- ------TaNAC69(2)           --------->ANAC58<---------DEAR3(1)--------->ALFIN1  <------------------SPL14   aagactactacggcagggagacaaggcgataaggaaggtggaggaggaggcggtggagctggaagtggaagtggaggagctccgatgtacggtggtggca  8345100  Previous    Next  AGI:  At4g14540.1    Description:  CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family. Identical to Nuclear transcription factor Y subunit B-3 (NFYB3) [Arabidopsis Thaliana] (GB:O23310); similar to CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family (Hap3b) [Arabidopsis thaliana] (TAIR:AT5G47640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61076.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41159.1); contains InterPro domain Transcription factor, NFYB/HAP3, conserved site; (InterPro:IPR003956); contains InterPro domain Transcription factor CBF/NF-Y/archaeal histone; (InterPro:IPR003958); Range:  from: 8344612    to: 8345214    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.