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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AHL20(2)
<
----------->
GT1
<---------
ZAT14
----------->
HVH21
----------->
GT1
--------->
ZAT14
--------->
At5g28300
<---------
GLK1(2)
<---------
TOE2(3)
<---------
TOE2(3)
--------->
AHL20(2)
----------->
GT1
-
-------->
DOF2
<---------
AHL20(2)
<---------
YAB1
----------->
GT1
---------->
DOF2
---------
taaaagaatttctgttcaaatttatgtaaaatgaaaaataagattgctacaatgcagagataaaattcaaacttac
atagaaagcggtgacaacgcctga
7628000
-------->
HAHB4
<---------
ICU4
<--------
ATHB1
<---------
YAB1
--------->
ICU4
<---------
ATHB12
<---------
ANAC55(2)
--------->
ANAC55(2)
--------->
YAB1
<---------
GLK1(2)
<---------
YAB1
<---------
ARR14(2)
--------->
GLK1(2)
<---------
YAB1
--------->
ARR14(2)
<----------
DOF2
<---------
HSFB2a(1)
--------->
GLK1(2)
<----------
DOF2
--------->
HSFB2a(1)
--------->
ARR14(2)
<-
---------
ARR11(3)
<---------
HSFC1(2)
<---------
YAB1
<---------
GLK1(2)
<--
-------->
ARR11(3)
<---------
YAB1
------>
ZmHOX2a(1)
<-------
TEIL
<---------
ANAC46
-->
RAV1(2)
<------
NtERF2
--------->
HSFC1(2)
<---------
GLK1(2)
<---------
ARR14(2)
<---------
TOE2(3)
ggtatcttttggaggcactttgattcttatttggaagaatcctgattcgtaatgattcttagattcaaaaccagaac
ctgtttttgtagtttacgtagaa
7628100
---------->
DOF2
<---------
At4g35610
--------->
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
<------
MYB46(1)
<---------
YAB1
--------->
YAB1
<------
MYB83
<---------
AHL20(2)
<---------
ATHB12
<---------
AtMYB61
--------->
AHL20(2)
<---------
KAN4(1)
<------
ZmHOX2a(1)
<---------
AHL20(1)
--------->
KAN4(1)
<-
<---------
TOE2(3)
<---------
AHL20(2)
<---------
KAN4(2)
========
--------
ICU4
<---------
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
--------->
At4g35610
-------
ATHB12
<----------
DOF2
--------->
AHL20(2)
------->
TEIL
------>
ZmHOX2a(2)
<-------
atcaatacaaaggatggtctttaattcaaacgatttaaatttattaaaagaaaaattcaatggac
ctgaagaatgatccaatgaaagctgaacttctttc
7628200
--------->
O2
=========================================
bZIP_DOF
--------->
ANAC58
<---------
TGA1a
--------->
ANAC55(2)
=========================================
bZIP_DOF
--------->
ANAC55(1)
<---------
ANAC55(2)
--------->
bZIP60(2)
--------->
ANAC58
<---------
AtMYB61
--------->
PCF2
--------------------->
WRI1
<---------
ARR11(3)
--------->
MYB52(1)
<----------
DOF2
--------->
ANAC58
--------->
ANAC46
<---------
ANAC58
--------->
ANAC58
--------->
TGA1a
--------->
YAB1
<---------
ANAC58
<---------
MYB46(3)
---------->
ID1
<---------
ANAC46
------>
MYB46(1)
--------
MYB52(1)
--------->
ICU4
<---------
O2
--------->
ICU4
------>
MYB83
=========================================
bZIP_DOF
<---------
MYB59
<---------
DEAR3(2)
---------
---
DOF2
--------->
ANAC46
<---------
ALFIN1
<---------
YAB1
<----------
DOF2
---------
ccttggttaagtttcaagacattattttgtccccacgtaacgacgtagttatcatcgaaacctactttgctttggtcgattccattaacttcataagccc
7628300
--------->
YAB1
-------->
HAHB4
<-----------
GT1
------->
GAMYB
----------->
HVH21
--------->
TOE1(3)
<---------
WOX13(1)
--------->
TOE2(3)
<---------
ARR11(3)
<------------
CBF
-------->
P
--------->
ARR14(2)
<---------
YAB1
<
--------->
MYB46(3)
--------->
MYB52(1)
--------->
ARR11(3)
<---------
AHL20(2)
<-
>
ANAC58
--------->
ICU4
---------->
DOF2
<---------
AHL20(2)
--
>
ANAC58
<---------
ATHB12
--------->
MYB52(1)
--------->
AHL20(2)
-----
tagcatcaaccctaatgatcaaatacaaaactgaaacaaaaccgaagattgaaagatattccat
cttattcattttaattgacccgtttgagtatttttt
7628400
<-----
<-------
GAMYB
--------->
MYB52(2)
--------->
MYB111(1)
--------->
ZAT18
--------->
MYB111(2)
--------->
ZAT14
<---------
MYB46(3)
<---------
ZAT14
--------->
MYB55(2)
<---------
ZAT18
<--------
P
<---------
HSFB2a(2)
<---------
ANAC58
<------
MYB46(1)
--------->
HSFB2a(2)
<---------
ANAC46
<------
MYB83
---
------>
ZmHOX2a(1)
<-----------
TBP
--------->
MYB111(1)
---------
AHL20(2)
<---------
AHL20(2)
---------->
DOF2
--------->
MYB59
--------
AHL20(1)
--------->
AHL20(2)
<---------
ANAC46
--------->
MYB46(2)
------->
AHL20(1)
<-----------
TBP
------->
TEIL
<---------
TOE2(3)
--------->
MYB111(2)
---->
AHL20(2)
<---------
GLK1(2)
<---------
ANAC58
<------
ZmHOX2a(1)
--------------->
AGL15
atatattttagtcctagagcaaaattctctcttatttatatagttgtgtacttgtgtataaaggatgaattagatagcattctaagtttggtagttgaat
7628500
<------------
CBF
------>
ZmHOX2a(1)
>>>>>>>>>
RAP2.2
------------>
CBF
--------->
AHL20(2)
<---------
CCA1(1)
<---------
ICU4
--------->
ARR11(3)
<---------
RVE1(1)
<---------
YAB1
--------->
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
------>
ZmHOX2a(1)
--------->
ICU4
<-----------
GT1
<---------
ARR11(3)
--------->
YAB1
<---------
ATHB12
------------>
CBF
--------->
ATHB12
--------->
TOE2(3)
--------->
YAB1
-------
CBF
--------->
AHL20(2)
----------->
GT1
<---------
YAB1
<-----------
GT1
--------->
TOE2(3)
<
--------->
CBF
<---------
AHL20(2)
--------->
YAB1
<------
ZmHOX2a(1)
<-------
TEIL
<-----------
tgcaatctttacaaaattaatacaatatctaaattgaaaatcatatatatgataggagatttttttcctcaatgcattcatcctcattcagcattgaaat
7628600
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
----
<---------
ICU4
--------->
LBD16
--------->
AHL20(2)
--------->
ATHB51
------>
MYB83
<---------
AHL20(2)
<---------
AHL20(2)
------>
MYB46(1)
<---------
YAB1
--------->
AHL20(2)
<---------
MYB111(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
MYB59
--------->
ARR11(3)
<---------
AHL20(2)
--------->
ANAC55(2)
<---------
ARR11(3)
<---------
YAB1
<-----------
GT1
--------->
ICU4
<---
---------
REM1(1)
--------->
ICU4
<---------
AHL20(2)
--------->
ANAC55(2)
<-----
-
CBF
--------->
TOE1(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
ggttgtagaccctacgattaattattttaagtagctaattttgtatttaatatacctaatcccccaaaattcaatttatgtgatttttagattttaatta
7628700
----------->
GT1
<---------
ANAC58
<---------
ANAC46
<---------
AHL20(2)
<---------
YAB1
<---------
ANAC58
---------->
DOF2
--------
------->
GT1
--------->
TOE2(3)
--------->
AHL20(2)
---------->
DOF2
----------
------
TOE2(3)
--------->
ATHB12
<-----------
GT1
----------->
GT1
---------->
DOF2
----
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
------------------------>
ANAC81
---------->
DOF2
agttataatttatacattagtaattgggtgatttaaatgtttttactacaaagaaatgaagaagattgaaaaaaagataacaaaagtataagaaagaaaa
7628800
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
ARR11(3)
--
--------->
YAB1
<---------
GLK1(1)
--
--------->
ANAC46
--------->
GLK1(1)
<-
--------------->
AtSPL8
<---------
CCA1(1)
<-
<---------------
AtSPL8
<---------
RVE1(1)
---
->
AHL20(2)
--------->
ATHB12
--------->
ARR11(3)
<---------
TOE2(3)
<--
->
GT1
--------->
ICU4
--------->
ANAC55(2)
<---------
ARR11(3)
<---------
YAB1
---------
tagaaatctaacaaaatgatttagtactatacataatgtgttattttgttttagagatatctatataaatttgatatcattaagaaacaatttcatgaaa
7628900
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AGI:
At4g13080.1
Description:
xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Putative xyloglucan endotransglucosylase/hydrolase protein 1 precursor (XTH1) [Arabidopsis Thaliana] (GB:Q9SV61); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT4G13090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23048.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Xyloglucan endotran
Range:
from: 7626609
to: 7628364
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.