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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC46
<---------
AHL20(2)
--------->
AHL20(2)
<-------
GAMYB
--------->
ARR11(3)
<---------
ANAC58
--------->
AHL20(1)
<-------
GAMYB
--------->
AHL20(2)
<---------
ANAC46
<---------
AHL20(1)
<---------
ANAC46
<---------
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
----------
GT1
<---------
ARR11(3)
<---------
ANAC58
<---------
AHL20(2)
--->
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
<---------
HSFB2a(2)
<-
----
AHL20(2)
----------------->
AGL3
<---------
DAG2
--------->
HSFB2a(2)
<------
aatactatttgggtgttatttgtgttccaaatatatttatgtgtaaaactttttgggtgttatttgtgttccaaaaacttgattaaataaaacaattttc
7612900
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(1)
--------->
ARR11(3)
<----------
DOF2
<---------
YAB1
--------->
AHL20(2)
<---------
ARR11(3)
<---------
ICU4
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
ICU4
----------->
GT1
--------->
YAB1
<---------
DAG2
<---------
YAB1
--------->
YAB1
--------->
YAB1
--------->
ICU4
<---------
AHL20(2)
<---------
AHL20(2)
---------
DOF2
<----------
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
---
-----
GT1
<-----------
GT1
------->
TEIL
<-----------
GT1
<-----------
GT1
--------->
AHL20(2)
tctttaatatttattttttacactttcataagatgtatgtaaatatttttttaactataactaattaatactttttctaaataacaatttatgatgagaa
7613000
<--------
<--------
<---------
ARR11(3)
--------->
AHL20(2)
<---------
ICU4
--------->
YAB1
--------->
YAB1
--------->
YAB1
<---------
AHL20(2)
----------->
GT1
--------->
ICU4
--------->
AHL20(2)
<-----------
RAV1(1)
--------->
YAB1
--------->
AHL20(1)
<---------
TOE1(2)
<---------
AHL20(2)
------>
ICU4
<---------
AHL20(2)
<---------
TOE2(2)
----------->
GT1
--------->
ARR11(3)
atgtttagtttatgtttttctaaatttaatatacaattaaaaaaaaaactcgcatgttggacaagtataatctattgttatatataatcatgagattttt
7613100
<---------
AHL20(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
YAB1
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<---------
ICU4
<---------
AHL20(1)
--------->
ATHB51
--------->
AHL20(2)
<--------
HAHB4
<---------
ICU4
<---------
ATHB12
<---------
AHL20(2)
--------->
ICU4
<---------
YAB1
--------->
AHL20(2)
<---------
ATHB51
--------->
YAB1
--------->
WOX13(1)
<---------
MYB52(1)
--------->
ICU4
<---------
YAB1
-------->
ATHB1
<-----------
GT1
--------->
ANAC55(2)
<---------
ALFIN1
-
RVE1(1)
<---------
TOE2(3)
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(1)
-
CCA1(1)
<---------
YAB1
<---------
YAB1
<-----------
GT1
<---------
YAB1
<-----------
GT1
-
tgttccaccattatcgttgtcaattattattctattattttcgtttttttctagcatttatctgtttttacttattaataaatatattttcaacacattg
7613200
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
------>
MYB46(1)
------>
MYB83
------->
GAMYB
--------->
MYB46(3)
------>
MYB46(1)
-------->
P
------>
MYB83
<---------
AtLEC2
<-----------
GT1
--------->
MYB55(1)
<-------
TEIL
--------->
AHL20(2)
<---------
MYB111(1)
<--------
P
<---------
AHL20(2)
<---------
MYB111(2)
<---------
MYB46(3)
--------->
AHL20(2)
<---------
MYB46(2)
--------->
ALFIN1
--------->
AHL20(1)
--------->
MYB46(3)
--------->
DAG2
<---------
AHL20(1)
--------->
WRKY12
---------->
DOF2
------->
TEIL
<---------
ARR11(3)
--------->
WRKY38(1)
----------------->
AGL1
-------->
AHL20(2)
--------->
AHL20(2)
--------->
DOF5.7(2)
<----------
ID1
--------->
At4g35610
ttttaaatagttttgtcaaaatatttaattttccttctggtcttctcagcgtttaccaaccaaataaatagagggccaaaggtggtagatgcatgaacct
7613300
*
TSS
--------->
AtMYB61
-------
<---------
ALFIN1
<----------
DOF2
<------
----------->
RAV1(1)
<---------
CCA1(2)
--------->
AGP1
<---------
ALFIN1
<-----------
GT1
<---------
ARR11(3)
--------->
LBD16
--------->
AtMYB61
<---------
AHL20(2)
--------->
HSFB2a(2)
--------->
ZAT6
--------->
AHL20(2)
<----------
DOF2
<---------
HSFB2a(2)
ctaacaccacca
caacttcaacacaattaaactcgtctctctttatctttctctctctctctcttctgttcattaacaaaatccagaactatatgagacc
7613400
<-----------
GT1
<---------
ARR11(3)
------>
ZmHOX2a(1)
--------->
TOE2(3)
--------->
LBD16
<----
--------->
TOE1(3)
<---------
LBD16
-----
<---------
ATHB12
<---------
ARR14(2)
<----
<---------
ALFIN1
--------->
TOE2(3)
<---------
GLK1(2)
-----
-------->
P
--------------->
AtSPL3
--------->
ARR14(2)
<--------
<-----------
HVH21
--------------->
AtSPL8
--------->
ARR11(3)
<-----------
GT1
<---------
AHL20(2)
-->
ARR11(3)
<---------------
AtSPL3
----------->
ARR10
<----------
DOF2
--------->
AHL20(2)
---
ARR11(3)
<---------------
AtSPL8
<---------
WOX13(1)
<-----------
GT1
<---------
MYB52(1)
ttgttgtcacttaccaccttcttagag
gtacctcaatcgtttccttaattgctcagattttccggtttaactctttaaccggtctctgttttttttaata
7613500
---------->
DOF2
<---------
ANAC46
-----
ARR14(2)
--------->
ZAT18
<---------
At4g35610
---->
ARR11(3)
<------
MYB83
<---------
ZAT14
<-------
GAMYB
-----
ARR11(3)
<------
MYB46(1)
<---------
ANAC46
<---------
MYB46(3)
---->
ARR14(2)
<---------
AtMYB61
<---------
ANAC58
---------->
ID1
---
GT1
<----------
DOF2
<---------
WOX13(1)
<---------
ANAC58
<-----------
RAV1(1)
<-------
tcccctaaagctttgattttgatgcaatggattggtttctattgagtttgtgtgcaatgggtatgtttagtttttgtcgttgctgattttgtttctctgg
7613600
--------->
WRKY12
<---------
WOX13(1)
<---------
At4g35610
<---------
YAB1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<-----------
GT1
--------->
ATHB12
------->
TEIL
--------->
WRKY38(1)
<---------
ANAC58
=====================
HOX2a_HOX2a
<-------
GAMYB
<---------
ANAC58
------>
ZmHOX2a(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
--
LBD16
---------->
ID1
<----------
DOF2
<------
ZmHOX2a(2)
<-----------
RAV1(1)
agaagactaatccattctcatatttggcttcttgttttttctttcctcttcttgattggatcaaatccatgaacccatcttctgttgactctggttttta
7613700
<------
MYB83
--------->
MYB111(1)
<---------
TOE1(2)
<--------
P
<---------
MYB55(1)
<---------
MYB46(3)
<---------
AtMYB61
--------->
ALFIN1
<------
NtERF2
<---------
ANAC58
<---------
DREB2C(2)
<---------
RAP2.6(2)
<---------
DEAR4(1)
<---------
DEAR3(1)
<---------
ANAC58
--------->
ATERF1(1)
<---------
ABI4(1)
--------->
ARR14(2)
<-------
GAMYB
<------
MYB83
<---------
ARR14(2)
<---------
MYB46(3)
----------->
GT1
--------->
GLK1(2)
<---------
ANAC46
--------->
ATHB12
--------->
YAB1
<------
NtERF2
===============================
<---------
YAB1
<---------
DEAR3(1)
<---------
YAB1
--------------->
AGL15
------
<---------
TOE1(2)
--------->
ALFIN1
---------->
ID1
--------->
WRKY12
---------
<---------
TOE1(3)
--------->
DAG2
<------
MYB46(1)
--------->
WRKY38(1)
<--------
<---------
TOE2(3)
--------->
DAG2
--------->
MYB59
--------->
At4g35610
---------
<---------
TOE2(2)
---------->
DOF2
<---------
TOE2(2)
<------
ZmHOX2a(1)
---------->
DOF2
--
<---------
At4g35610
--------->
AtLEC2
--------->
MYB55(2)
<---------
TOE2(3)
<------
MYB46(1)
<--------
gatttagcttaggtttatgagaatccatgaaaaaggtggcggtggtaggttttgttcttattgaggagttgacttgatttggttaaaaagtcttccttga
7613800
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AGI:
At4g13040.1
Description:
AP2 domain-containing transcription factor family protein. Identical to Ethylene-responsive transcription factor-like protein At4g13040 [Arabidopsis Thaliana] (GB:Q56XP9;GB:Q9SV65); similar to unknown [Picea sitchensis] (GB:ABK22350.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:
from: 7613313
to: 7615383
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.