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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
---
ANAC46
--------->
YAB1
---
bZIP60(1)
<---------
AHL20(2)
<---------
ICU4
---
ANAC55(2)
--------->
AHL20(1)
--------->
YAB1
---->
GT1
<---------
AHL20(1)
<-------
TEIL
-->
ANAC55(2)
--------->
AHL20(2)
<---------
MYB46(3)
------>
ZmHOX2a(2)
--->
STF1
--------->
YAB1
<-----------
RAV1(1)
----------->
GT1
-
TGA2(2)
<-----------
GT1
--------->
AHL20(2)
<-------
TEIL
<--------
P
--------->
ICU4
->
TGA1
<---------
ZAT6
<---------
AHL20(2)
--------->
AHL20(2)
<---------
MYB46(3)
--------->
YAB1
aaattggtagtattaccctacttctaagtttaaatataatcacttcgtttatatacatctacatttgttgttgaaaacaggttgatcgtaataatgtcta
7142700
<---------
YAB1
-------->
HAHB4
<---------
ICU4
--------->
ANAC58
--------->
YAB1
------>
NtERF2
--------->
ICU4
------->
GAMYB
<---------
ICU4
--------->
ANAC46
--------->
YAB1
<---------
AHL20(2)
--------->
ICU4
<---------
GLK1(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
--------->
ARR11(3)
<---------------
AGL15
--------->
ANAC58
<---------
ATHB51
--------->
AHL20(1)
--------->
AHL20(2)
--------->
bZIP60(2)
<---------
AHL20(1)
<---------
AHL20(1)
<<<<<<<<<
GATA-1
--------->
YAB1
--------->
ANAC58
--------->
AHL20(1)
<---------
AHL20(2)
<---------
DAG2
--------->
ICU4
<---------
LBD16
<---------
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
----------->
GT1
--------->
ANAC46
--------->
AHL20(2)
<------
ZmHOX2a(1)
ttactttatctatatatatagagtaattatatgcaacgccacggatgacaaaatttcatataacaaataaaataattatgacataggaatatattctcca
7142800
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
ANAC58
--------->
ANAC58
--------->
ARR11(3)
--------->
CCA1(2)
<---------------
AGL15
<---------
ARR14(2)
---------->
ID1
--------------->
AGL15
--------->
ARR11(1)
<---------
ICU4
----------------->
AGL2
<---------
TOE2(3)
<---------
YAB1
====================================================================
--------->
YAB1
----------------->
AG
<---------
DOF5.7(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
MYB52(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ARR14(2)
--------->
YAB1
--------
<---------
ICU4
<---------
AHL20(2)
--------->
GLK1(1)
<--------
HAHB4
--------->
TOE2(3)
--------->
ATHB51
--------->
AHL20(2)
<---------
CCA1(2)
<---------
YAB1
------->
TEIL
<--------
ATHB1
<---------
YAB1
----------------->
AGL1
<---------
DAG2
<---------
TOE1(3)
<-------
<---------
ATHB51
--------->
AHL20(2)
---------->
DOF2
<----------
DOF2
--------->
ARR14(2)
--------->
ICU4
--------->
AHL20(2)
----------------->
AGL3
--------->
ICU4
<-----------
GT1
<---------
<---------
ATHB12
--------->
YAB1
<-----------
GT1
<---------
GLK1(1)
<---------
AHL20(2)
------->
TEIL
ccaataatttttgcccttataatataaaaaaatttaccaaaagaagaatggatatcttgtaatgctttttctataattaacgatacgcatgtactttaat
7142900
--------->
YAB1
<---------
YAB1
<----------
DOF2
--------------->
AGL15
--------->
AHL20(1)
<
=======================================
MADS_MADS
<---------
AHL20(1)
--
->
AHL20(2)
<---------------
AGL15
--------->
AHL20(2)
<--
--
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<----
-
DOF2
<------
ZmHOX2a(1)
----------->
GT1
---------->
DOF2
------
taagcactttggtctaggattatagactattataggtatagagagaaaaaaaatggctaaagataaaatatataaaaccccaaacacagccaaactattt
7143000
--------->
ANAC55(2)
<---------
ANAC55(1)
<---------
AHL20(2)
--------->
AHL20(2)
<------------
CBF
<---------
YAB1
<---------
AHL20(1)
--------->
ATHB12
<---------
TOE1(3)
-----------
GT1
--------->
AHL20(1)
<----------
DOF2
<---------
TOE2(3)
------->
YAB1
--------->
YAB1
<---------
ANAC55(2)
------>
ZmHOX2a(1)
<----
-------
YAB1
--------->
AHL20(2)
<---------
ANAC58
<---------
At4g35610
--------->
GLK1(1)
-----
AHL20(2)
--------->
YAB1
<---------
ANAC58
----------->
RAV1(2)
<---------
GLK1(1)
--->
AHL20(2)
--------->
CCA1(2)
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<-------
attatcagttcatggatatagaagaataatatataaaaaattcttacgtcttttttgttattggctcctgatttcataaatttagggtttccaagaattc
7143100
<-------
TEIL
*
TSS
---------->
DOF2
<---------
ATHB12
--------->
YAB1
------------>
CBF
<---------
ATHB12
-------
GT1
<-----------
GT1
--------->
WOX13(1)
--
GLK1(1)
------>
NtERF2
<----------
DOF2
<---------
ATHB12
tccatttc
aatcttgccgactctttccaaagactctctctctttctactctctccctcatcgttctcttagagacacaaatcaatcaaaagcatacataa
7143200
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
WOX13(1)
--------->
ATHB12
<---------
YAB1
<---------------
AGL15
----------->
GT1
=======================
HOX2a_HOX2a
--------->
ALFIN1
<--
---------->
DOF2
<-----------
GT1
------>
ZmHOX2a(1)
--------------->
AGL15
<---
aaacaaagggg
gtaatcttttttctcaactatatatgtcctcaatttctgattgatctcttctctatttttagtagaaggtggagattgttcttgttctc
7143300
--------->
ATHB12
-------->
HAHB4
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
--------->
ATHB51
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<--------
ATHB1
-
<---------
At4g35610
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
------>
ZmHOX2a(1)
-------
YAB1
--------->
ANAC58
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ATHB51
<--------
------
TOE1(2)
--------->
ANAC58
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
atgtttgctgttcttgtagtaagaaatatgtctatatatatatatatatatatatatatatatatataattaaataattgctcccatctaatttcctctc
7143400
--------->
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(1)
--------->
ZAT14
<---------
AHL20(1)
<---------
ZAT6
<---------
ZAT14
--------->
RVE1(1)
----------->
GT1
<---------
DAG2
--------->
CCA1(1)
<---------
TOE2(3)
<----------
DOF2
<---------
AHL20(2)
<---------
TOE1(3)
<-----------
GT1
--------->
AHL20(2)
<-----------------------
TaNAC69(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
----------->
GT1
<---------
MYB46(3)
<---------
AHL20(2)
-------->
YAB1
--------->
AHL20(2)
--------->
AHL20(1)
<-----------
RAV1(1)
--------->
AHL20(2)
-------
AGL15
<---------
AHL20(2)
<---------
ARR11(3)
--------->
YAB1
--------->
ATHB12
atggataatttactttactgaaattaaattttttcatttaatatcttatgggaagagtggaaaatcaaaatactgttgttgattag
ggttaattaaatta
7143500
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
------->
GAMYB
--------->
MYB52(1)
--------->
ANAC58
--------->
ANAC46
---------->
DOF2
--------->
ANAC58
<----------
DOF2
---------
<---------
ANAC46
<---------
ARR14(2)
--------->
ANAC58
------->
TEIL
<---
--------->
ALFIN1
<------
ZmHOX2a(1)
--------->
ZAT2
---------->
DOF2
<----------
DOF2
gaaga
atggtgaggggaaagacagagatgaagaggatagagaacgcaacgagcaggcaagtgactttctcaaaaagaagaaatggacttttgaagaaagc
7143600
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AGI:
At4g11880.1
Description:
AGL14 (AGAMOUS-LIKE 14); DNA binding / transcription factor. Identical to Agamous-like MADS-box protein AGL14 (AGL14) [Arabidopsis Thaliana] (GB:Q38838;GB:Q9T056); similar to AGL19 (AGAMOUS-LIKE 19), transcription factor [Arabidopsis thaliana] (TAIR:AT4G22950.1); similar to MADS-box protein PTM5 [Populus tremuloides] (GB:AAP46287.1); similar to MADS-box protein [Vitis vinifera] (GB:ABF56527.1); similar to MADS box transcription factor 5 [Populus tomentosa] (GB:ABG34340.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487)
Range:
from: 7143109
to: 7147216
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.