Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------DOF5.7(2)                                                                           <---------WRKY38(1)                                                                           <---------WRKY12                                                                          --------->DOF5.7(2)                                                                         <-----------HVH21                                        <----------ID1       --------->ARR14(2)                                      --------->MYB52(1)  --------->HSFB2a(2)    --------->ANAC58                                  <---------TOE2(3)       <---------HSFB2a(2) --------->ANAC46                                 ---------->DOF2<----------ID1      ---------->DOF2             ----- -------->YAB1            <------ZmHOX2a(2)  ---------->DOF2 <---------ARR14(2)  --------->ANAC58   aatcaaaactttgttccactatcaacagatcgaattaaagtaacgacaaaagaacaagacccagaaccccaaaagcgtcaacgaagcaatacatctaata  6853500                          ------->GAMYB                        <---------TOE2(3)                  --------->ARR11(3)                  <---------ARR11(3)                 --------->YAB1                                                            ------>ZmHOX2a(2)                <---------YAB1                                                             <---------DEAR3(1)            <---------TOE1(3)                                                             <------ZmHOX2a(2)            <---------TOE2(3)   <------ZmHOX2a(1)                                        --------->ARR14(2)         --------->DOF5.7(2)  --------->ANAC58          --------->ZAT14        <---------ANAC58        <----------DOF2--------->MYB52(1)  <---------YAB1                      <---------ANAC58      <---------ATHB12 <-----------GT1----------->GT1   <---------ZAT14  <-----------RAV1(1) ----->DOF2<---------DOF5.7(2)--------->ANAC58   <-----------GT1        <---------TOE2(3)<---------ARR14(2)   aagtttcaatctttaacgatgatattaacggtaaggaagagagttatatttataccagtgaagttatcgattttgatgttggcctgagcacgatcggcga  6853600                <---------ARR14(2)                --------->ARR14(2)        <------NtERF2       ------>NtERF2      --------->RAP2.3(2)     <------NtERF2     --------->RRTF1(1)     --------->RAP2.3(1)     --------->ATERF1(1)    <---------DEAR4(2)    <---------ORA47(2)    <---------ERF1------>ZmHOX2a(2)    <---------RAP2.3(1)    <---------RRTF1(1)    <---------ATERF1(1)    ------>NtERF2<------ZmHOX2a(2)    <---------RAP2.6(1)   <---------RAP2.3(2)   <---------DREB2C(2)   <---------RRTF1(2)   <---------RRTF1(3)               <---------ANAC46   <---------RAP2.3(3)         <----------DOF2                                    <----------DOF2   <---------RAP2.6(2)        <---------ANAC58      ----------->RAV1(1)   ---------->DOF2   --------->ALFIN1           <---------ANAC58   ------->GAMYB        --------->HSFC1(1)<----------DOF2   <---------DEAR3(1)   <---------WRKY12       --------->At4g35610    <---------HSFB2a(2)  --------->ATERF1(1)--------->ANAC46        <---------WRKY38(1)      --------->HSFB2a(2)      <-----   agaaggcggcgcaattgggatccaagtcaatggctttggagtataagtcaacagcaacatcgaagtcatcatctagaaaagcttctttagctttctctgc  6853700                            --------->ARR14(2)            <---------ATHB12<---------ARR14(2)      <xxxxxxxxxxxxxxxsmallRNA(le3)             <-----------HVH21   <---------ANAC58        <------ZmHOX2a(1)   --------->ANAC58                      --------->GLK1(2)   <---------ANAC58  <---------YAB1            --------->ANAC58           ---------->DOF2     ------>ZmHOX2a(1) ----At4g35610<---------GLK1(2)                --------->ANAC46   <---------YAB1    <---------GLK1(2)   taattccttggccattgattcttatcagaggatttgagagaacacaaacaagtcagagagagagagagattatagagaaagagaccgattctattcctct  6853800                                                                                                  <--                                                                                                  ---                                                                                        --------->DAG2                                                                                       --------->DAG2                                      <----------DOF2   *TSS       <-----------HVH21  ---------->DOF2 <----------DOF2             <---------AHL20(2)    --------->AHL20(2)     <-----------GT1----------->GT1   aggctttttttttttttgctgtgtttgggattttttttttcttttaagaacgttttaatacctctactaggtcatataaccaaaaacaaaaaggtaatta  6853900                                                                                  --------->AHL20(2)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(1)                                                                                  <---------AHL20(2)           <-----------GT1                     <------------CBF                  --------->AHL20(2)      --------->AHL20(2)                  --------->TOE2(2)                      <---------AHL20(2)      <---------AHL20(2)                  --------->TOE1(2)                <-----------GT1      <---------AHL20(1)      --------->AHL20(2)   <---------GLK1(2) <---------RVE1(1) <---------AHL20(2)           <---------AHL20(2)<---------WOX13(1)  <---------ARR11(3) --------->AHL20(2)      <---------YAB1  --------->YAB1             <---------ARR14(2) -------ARR11(3)      <----------DOF2   >>>>>>>>>MYB98              <---------GLK1(2)              -- ------>ARR11(3)  <-----------GT1      <-----------GT1              --------->ARR14(2)         ------   gattttattttattttctaatttccttttgattttattttttaacataagattgattcttgataagtccagattttttaacaaataaattagttgacaaa  6854000                                                                       <---------ICU4                                                                       <--------HAHB4                                                                      <---------YAB1                                                                    --------->YAB1                                                                 --------->YAB1                                                               --------->AHL20(2)                                                              <---------AHL20(2)                                          <---------AHL20(2) <---------AHL20(2)                                      <---------CCA1(1)      --------->AHL20(2)                                      <---------RVE1(1)   <---------AHL20(2)                                     --------->AHL20(1)   <---------ICU4                                     <---------ARR11(3)   --------->ATHB51       <---------------AGL15         <---------AHL20(1)   --------->AHL20(2)       --------------->AGL15         --------->ARR11(3)   <--------ATHB1       ----------->GT1        ----------->GT1            <---------ATHB51  --------->YAB1              --------->YAB1             <---------ATHB12 ------->YAB1    ---------->DOF2 ---------->DOF2         --------->ICU4--------->YAB1           ----- ---->DOF2  ---------->DOF2--------->MYB52(1)          --------->YAB1 --------->ICU4 ----------------   agaataatactgaaaaaaggaaagaaaactaatggtaaagatatttatagagaactacaataatttaaaataatcattttctactcattttgtttatatc  6854100                                                              <-----------GT1  --------->AHL20(1)                                                            <---------AHL20(2) <---------AHL20(1)                                                       <---------ARR11(3)      --------->ARR11(3)                                                       --------->AHL20(1)   --------->AHL20(2)                                                       --------->ARR11(3)   <---------AHL20(2)      <    --------->DOF5.7(2)                                <---------AHL20(1)  <---------AHL20(2)     --- ---->YAB1--------->YAB1                            --------->YAB1     <---------YAB1          <----- ----->WRI1                         ----------->GT1<---------YAB1 ----------->GT1            --------   gtaatcgtttactcatagtttagcaaatacaatgtgatttgtgaatttagactatgatatattttaacaagttataatttatatattgactagattagga  6854200                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                -----                                                                   <---------YAB1               <----                                                                <---------ATHB12                <----                                     --------->YAB1           --------->WOX13(1)          --------->TOE2(3) -----------HVH21                   <---------YAB1    --------->AHL20(2)                  --------->TOE1(3) ------>MYB46(3)                 ----------->GT1  ----------->GT1--------->YAB1        <-----------GT1 -ZmHOX2a(1)               <---------AHL20(2)   ---------->DOF2 --------->ICU4      <---------ICU4  < ->MYB59             --------->ANAC55(2) --------->GLK1(2)  ------------>CBF       --------->AHL20(2)   cccgtcgtccaatacacagatttaagtattttaagttgataataatctagtaaagttaaaatatcaattatcaaacttttgccaaatatttaccttaaaa  6854300                                                   --------->ICU4                                                   <---------YAB1                                                 <---------ANAC58                                                 <---------ANAC46                                                 <---------ANAC58                                                ---------->ID1           --------->TOE2(3)              <---------AHL20(2) <---------AHL20(2)                      <---------AHL20(1) --------->AHL20(2)                      --------->AHL20(1) ---------AHL20(1)                       --------->ARR11(3)            --------->DOF5.7(2) -------->AHL20(1)                       <---------ARR11(3)       --------->O2 -------->AHL20(2)                      --------->CCA1(2)         <---------O2 ---->AHL20(2)                         --------->ARR11(3)         <---------bZIP60(1) -----AHL20(1)                         <---------ARR11(3)   *TSS  --------->bZIP60(1) -----AHL20(2)                 <---------------AtSPL8     <---------ZAT6--------->WRKY12           <- ---------AHL20(2)             <---------------AtSPL3 <---------YAB1 <---------ANAC46             ---   aatttatttgcaacctcgaaaaatccatctaaatatgtacagatatatttgtcgtgattactgttacgacgtcgtttaccagttcgttcttccttcttct  6854400  Previous    Next  AGI:  At4g11260.1    Description:  SGT1B (enhanced downy mildew 1b); protein binding. similar to SGT1A (Suppressor of G2 (Two) 1A) [Arabidopsis thaliana] (TAIR:AT4G23570.2); similar to SGT1A (Suppressor of G2 (Two) 1A), protein binding [Arabidopsis thaliana] (TAIR:AT4G23570.1); similar to SGT1-like protein [Brassica oleracea] (GB:CAF06580.1); contains InterPro domain SGS (InterPro:IPR007699); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain CS (InterPro:IPR007052); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro dom Range:  from: 6851273    to: 6853856    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g11270.1    Description:  transducin family protein / WD-40 repeat family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO65901.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 6854360    to: 6859660    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.