Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->At4g35610                                                                                         --------->ZAT2                                                                                         <---------ZAT2                                                                                         <---------At4g35610                                                        <------ZmHOX2a(1)               ------->TEIL          <-----------HVH21                           --------->ALFIN1               --------->ANAC58         <----------DOF2                             <------ZmHOX2a(1)               --------->ANAC46    <---------HSFC1(2)                           --------->LBD16                     <---------O2    --------->HSFC1(2)   --------->HSFB2a(1)   <---------LBD16                       --------->ANAC58    --------->HSFB2a(1)  <---------HSFC1(2)    <---------At4g35610                   <---------ANAC55(2) --------->LBD16         --------->HSFC1(2)    --------->At4g35610                   --------->O2 -------->ANAC46         <---------HSFB2a(1)----------->HVH21                      <---------ALFIN1 ----->ARR14(2)    <-----------HVH21       <-----------TGA1                     <------ZmHOX2a(1)   < ------ARR14(2)    --------->LBD16         <-----------HVH21                  --------->MYB59    ---- -->AHL20(2)   --------->DEAR3(1)         --------->ANAC46                  <---------MYB52(1)   ----   atccgaaactcctttcacctccgtcgaagcttcttcaacattctccgtcaccggaggaggagggaagttaagctctgcgttaggaccacgtagctgaata  6795400                                                                                           <------NtERF2                                                                                          --------->ABI4(1)                                                                                         --------->DEAR3(1)                                                                                         <---------ATERF1(2)                                                                                         --------->ATERF1(2)                                                                                         --------->RAP2.6(2)                                                                                         --------->RRTF1(3)                                                                                         --------->RRTF1(2)                                                                                         --------->DREB2C(2)                                                                                         --------->RAP2.3(3)                                                                                         --------->RAP2.3(2)                                --------->DEAR3(1)                                      --------->ORA47(2)                                <---------ANAC46                                        --------->ERF1                                --------->O2                                            --------->DEAR4(2)                                <---------O2                                            --------->RRTF1(1)                                ==================bZIP_DOF                              --------->ATERF1(1)                                <---------ANAC58                                       <---------At4g35610                                --------->TGA1a                --------->O2            --------->At4g35610                                <---------ANAC58               <---------O2            ------>NtERF2                                <---------TGA1a                <---------ANAC55(2)     <---------ATERF1(1)                              ------>NtERF2          ------>MYB46(1)                   --------->ABI4(1)                              --------->LBD16      <---------MYB59          ------>ZmHOX2a(2)                             --------->DEAR3(1)    --------->AtMYB61       <------ZmHOX2a(2)                     <---------HSFC1(2)         --------->MYB52(1)         <---------GLK1(1)                     <---------At4g35610        ------>MYB46(1)--------->ANAC58        --------->LBD16                     <------NtERF2              ------>MYB83   --------->ANAC58       --------->ANAC46       --------->YAB1<---------HSFB2a(1)      <---------MYB46(2)           --------->GLK1(1)     <---------DOF5.7(2)     --------->ANAC46 <---------MYB52(2)          --------->ARR11(3)   --------->DOF5.7(2)     ------>ZmHOX2a(1)  <---------MYB111(1)         <---------AGP1--------->RAP2.3(1)  <----------DOF2    --------->HSFB2a(1)      <---------MYB59<---------ALFIN1         --------->DEAR3(1)  ========================================bZIP_DOF--------->MYB46(3)      <---------ARR11(3) <---------ANAC46    --------->At4g35610     <---------ANAC55(2)          <---------ARR14(2) -------TEIL         <---------ZAT2         ------->TEIL--------->TOE1(3) --------->ARR14(2) ----->ZAT2          --------->ZAT2<-----------HVH21 ------>MYB83   <---------REM1(2)<---------LBD16 ----->At4g35610     --------->HSFC1(2)---------->DOF2  --------->TOE2(3)<---------CCA1(2)------>NtERF2   gctgcgttatcgtaaacaatggcagcttcctccgccgtgtcaaaagtacctaaccaaaccctaacacgtctactcggatctctaatctccgccgcccatt  6795500                                          <---------------------WRI1                                          <------NtERF2                                         ------>NtERF2                                         <-----------HVH21                                        --------->DEAR3(1)                                      ------>NtERF2                                      <---------RAP2.3(1)                                      <---------ATERF1(1)                                     <---------DEAR3(1)                           <---------HSFC1(2)                           --------->HSFB2a(1)                           --------->HSFC1(2)      --------->MYB46(3)                       --------->ANAC58--------->RAP2.3(1)                       --------->ANAC46--------->ATERF1(1)                       --------->ANAC58<------NtERF2                      --------->LBD16--------->DEAR3(1)                  --------->ANAC46 <-----------HVH21--------->AtMYB61                  --------->ANAC58--------->O2   ------->GAMYB--------->At5g28300 <------------------                <---------ALFIN1 ------>ZmHOX2a(1) <---------MYB55(2) ------->GAMYB              <---         <----------DOF2   <---------HSFB2a(1)  --------->MYB46(3)    <---------ZAT18  <<<<<<<<<TBF1  <---------ALFIN1--------->ANAC58--------->ANAC46-------->P ----------->GT1 <----------DOF2 <-------   ttccccacggtctttgcctcactccacgaaacttcctcgtcgccgtcgtaacaaccactggaacagtaacaacgcgcttctttctcttcttcttcatcgg  6795600                              <---------ALFIN1       --------->ZAT6                          --------->MYB46(3)------->TEIL  --------->O2                         --------->ANAC58--------->ANAC55(2)                --------->MYB52(1)       --------->ANAC46 <---------O2               --------->AtMYB61         <---------ANAC55(2)        --------->YAB1   --------->ANAC58--------->ANAC58 --------->bZIP60(1)   <----------DOF2    <---------ATHB12   --------->ANAC58 <---------bZIP60(1) ------ANAC81 --------->MYB46(3)        --------------->AtSPL3    <---------ANAC46 ------GLK1(2)<---------ABI4(2)         --------------->AtSPL8 <---------MYB52(1)                <<<< --At4g35610  <---------MYB55(2)     <-----------HVH21 --------->ANAC46--------->ARR11(3)     <<<<<<<   cttctctttatcagaaaccaccgaatcaagcaccacttccttcacgtacttcttaacacgacgtcgttttgtagataatgcatcaaaatcaacttcttct  6795700                      --------->ANAC55(2)                      <---------ANAC55(1)                      <---------ANAC58                 <-----------RAV1(1)              --------->ARR14(2)              --------->GLK1(2)              <---------ARR14(2)   --------->MYB52(1)         <---------WRKY18(1)  <------ZmHOX2a(2)     --------->GLK1(2)        ----------->HVH21   <------ZmHOX2a(1)      <---------GLK1(2)      <---------ANAC58<---------ANAC55(2)        ----------->ARR10      <---------ANAC58<---------ANAC58          <---------TOE1(2)  <-----------HVH21<---------MYB52(1)       <-------TEIL <<<<<TBF1    ------->TEIL --------->ICU4  --------->GLK1(2)                              <---------AHL20(2) <<TBF1<----------DOF2<---------ANAC46    <---------GLK1(2)                               --------->AHL20(2)   tcttcgtcgcttgacgaatctgttgcgtaaggatcagtaacagagattcgtaagattcttgggagagaaactttcttctctgtctccattttttaaatct  6795800                                                                <---------AHL20(2)                                                            <-----------TBP                                                          <-----------TBP                                                     <---------TOE1(2)                                                    <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC46                                                  <---------O2----------->TBP                                                  <---------ANAC58                                                  ==========================bZIP_DOF       ----------                                                  ================================================bZIP_DOF                                                  <---------bZIP60(2)                  ---------->DOF2                                                  <---------TGA1a---------->DOF2   --------->DAG2                                           =================bZIP_DOF              ---------->DOF2               <---------YAB1  <---------ANAC46<-----------RAV1(1)              <------ZmHOX2a(1)   -  <----------DOF2        <-----------GT1   <----------DOF2--------->AHL20(2)  --------->MYB59    ----   ctctctttaaaactgttgtaatagttttaacttatgtgtgttcttctttgtgtcgtgtgtttatatataaagaccaaagttaggaaaagtaaagggcaaa  6795900                                                                 ---------->DOF2                                                              --------->LBD16                                                             --------->LBD16                                                             <---------LBD16                                                            <---------LBD16                                                      --------->ARR14(2)                                                      <---------GLK1(2)                                                      --------->ARR11(3)                                                      <-----------ARR10                                                      --------->ARR14(3)           ----------->GT1                            <---------ARR11(3)     ---------->DOF2                                  <---------ARR14(2)                   <---------AHL20(2) ->GT1   ----------->GT1         <---------WOX13(1)   <---------ARR14(3)               <---------DAG2 ---------->GT1    ----------->GT1      <----------DOF2    <---------LBD16             <----------DOF2 ------>DOF2    <------------CBF<------------CBF    ----------->ARR10      ---------->DOF2 --------->AHL20(2)   aaaggaataaagagagaaaattggtaaaacaagagattgatgctttgtaacaagaagattttcccgggaaagttgaagaaagcagagagcttttttaata  6796000                               <---------ZAT18           <---------------AGL15                               --------->ZAT18           --------------->AGL15                              <------ZmHOX2a(1)         <-----------------AGL1                      <---------REM1(1)                 <-----------------AG                    <------MYB46(1)                     <-----------------AGL3                -------                    <---------ANAC46              <----------DOF2                            --------                    <------MYB83    ---------->DOF2   <-----------GT1                        ------>ZmHOX2a(1)                   --------->MYB111(2)       --------->GLK1(1)                              ---------                   --------->MYB46(2)      <------ZmHOX2a(1)                      <---------TOE2(3)     --------->HSFB2a(2)   <------ZmHOX2a(1) <---------GLK1(1)               <----------DOF2<--------   tatgcttatggaatcaagagtttggtgaaggaggacactaaagaaggagatgcttttttcttatttagggatgaaatttcttttaagaaatattcctggg  6796100 <---------AHL20(2)   --------->DAG2 -->LBD16            ---------->DOF2              ---------->DOF2   ---------->DOF2 ->LBD16       ---------->DOF2             ----------->GT1        --------->ARR11(3) >TOE1(2)  <---------At4g35610         ---------->DOF2         ------------------------>ANAC81 -LBD16    --------->At4g35610    --------->At4g35610       >>>>>>>>>TBF1     --------->At4g35610   aatttttttttgcagcgaaaagaaaaagtttagagcagaagaaaagagtgacaaaagatgaagaagaagataaagagagaagcagagcaaaacatgtaag  6796200                                                               <-----------GT1                                                          <---------ANAC46                                                         <------NtERF2                                                         ------>NtERF2                                                        --------->LBD16                                                        <---------RAP2.3(1)                                                       <---------DEAR3(1)                                                       <---------ANAC46                                                   --------->ATERF1(1)                                                   <-------GAMYB                                                  <---------DEAR3(2)                                                  --------->MYB55(2)                                                  <---------MYB46(3)                                                  <---------ATERF1(1)                                     --------->ARR11(3)<---------RAP2.6(2)                                     <---------ARR14(2)<---------RAP2.3(2)                                     --------->ARR14(2)<---------RRTF1(2)        <---------------AGL15                                     <---------ARR11(3)<---------RAP2.3(3)      ----------------->AGL1                                    <------ZmHOX2a(1) <---------LBD16           <---------YAB1                              <---------YAB1     <---------DEAR3(1)    ------>ZmHOX2a(1)                            <----------DOF2    ------------>AtMYB77    <----------DOF2<---------TOE2(3)   tgaagagagtgactctgaatagaacagagacttttataggatattgaaacggcggttgcggcgttttacaatccttttttttgtcattaagggaaacaaa  6796300  Previous    Next  AGI:  At4g11140.1    Description:  CRF1 (CYTOKININ RESPONSE FACTOR 1); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor CYTOKININ RESPONSE FACTOR 1 (CRF1) [Arabidopsis Thaliana] (GB:O82503); similar to CRF2 (CYTOKININ RESPONSE FACTOR 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G23750.2); similar to CRF2 (CYTOKININ RESPONSE FACTOR 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G23750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65840.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptio Range:  from: 6794772    to: 6795789    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.