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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
---------->
DOF2
--
<------
ZmHOX2a(1)
--
<---------
ARR11(3)
<---------
LBD16
--
--------->
ARR11(3)
<---------
HSFB2a(2)
--
----->
ANAC46
--------->
GLK1(2)
<-----------
RAV1(2)
---------->
DOF2
-->
TEIL
----------->
GT1
<---------
At4g35610
<---------
ANAC55(2)
-------
AtSPL3
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
YAB1
---------
-------
AtSPL8
--------->
ANAC58
<---------
ZAT18
--------->
LBD16
----------->
GT1
<--------
cggctcaaatccatgagagcaagaaaaatcttgagtaatccactcagttgctccaggaaagcaaatgcttatacgaatgataaatctcgtaaaaggtctt
6594100
--------->
ZAT18
<---------
ZAT18
<------
MYB46(1)
--------->
LBD16
<------
MYB83
------->
GAMYB
<---------
At5g28300
--------->
MYB59
--------->
MYB46(3)
---
<-----------
GT1
<---------
REM1(1)
----------->
RAV1(1)
<---
------->
ANAC58
--------------->
AGL15
--------->
MYB52(1)
<-----
------->
ANAC46
----------->
RAV1(2)
--------->
ANAC58
------
------->
ZAT6
--------->
MYB52(1)
--------->
ANAC58
<---------
ALFIN1
<-----
------->
ANAC58
------->
TEIL
---------->
DOF2
------->
GAMYB
------
>
ARR11(3)
--------->
ANAC58
--------->
DEAR3(2)
<------
ZmHOX2a(1)
<---------
At4g35610
-
ARR11(3)
--------->
ANAC58
--------->
MYB52(1)
---------->
DOF2
<----------
DOF2
--------->
At4g35610
aacgctattaccgcacaagtacctgatgtaggtaccgaagagaaagcaacagcctgaaaggacaactcacactttggcaagtttataagctccctagtat
6594200
--------->
AtMYB61
<xxxxxxxxxxxxxxxx
smallRNA(i)
------>
ZmHOX2a(2)
<---------
GLK1(1)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR11(3)
------>
MYB46(1)
------->
GAMYB
<------
ZmHOX2a(1)
<---------
ARR11(3)
------>
MYB83
<------------
MYB.PH3(2)
================================
HOX2a_HOX2a
<---------
MYB111(2)
<---------
TOE2(3)
<---------
AGP1
-------->
P
<----------
DOF2
<---------
MYB111(1)
<--------
P
<-----------
ARR10
------->
GAMYB
<---------
MYB46(2)
------>
ANAC55(2)
<---------
CCA1(2)
--------->
MYB46(3)
--------->
MYB46(3)
------
LBD16
--------->
ZAT14
--------->
ANAC46
<---------
DEAR3(2)
----
ARR14(2)
<---------
ZAT14
--------->
ANAC58
--------->
MYB46(3)
----------->
GT1
--->
ZAT14
--------->
ANAC46
--------->
ANAC58
<---------
ANAC46
<---------
MYB52(2)
----
ZAT14
<---------
ZAT18
xxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
MYB46(3)
<--------
P
--->
ARR14(2)
--------->
ZAT18
<xxxxxxxxxxxxxxxx
smallRNA(i)
<---------
MYB52(2)
<---------
LBD16
acgggttgaggaagaacatgtccactaaactggatcttcgcataagcaaccatccgtctttcgagtaacaaacatcggttccaactaactcgggtaaatt
6594300
-------->
P
<---------
ALFIN1
<---------
ALFIN1
<---------
ANAC58
<---------
LBD16
<---------
ANAC58
<---------
MYB52(1)
<---------
HSFB2a(1)
<---------
RAP2.6(3)
--------->
HSFB2a(1)
--------->
ANAC46
<---------
At4g35610
--------->
MYB46(3)
--------->
ANAC58
--------->
At4g35610
--------->
ANAC46
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
------>
ZmHOX2a(2)
--------->
RAP2.6(2)
<---------
HSFC1(2)
<-----------
GT1
<---------
ATHB12
<-----------
HVH21
---------->
DOF2
--------->
HSFC1(2)
cagtgtgtaactcttccttcccaatggatcgaagagaatagtcacgccgtaatgtctcggaaagctgataacccatggatgcttctccacaacccgaact
6594400
--------->
ZAT2
--------->
ANAC58
<---------
ZAT2
--------->
ARR14(2)
--------->
AtLEC2
<---------
ARR14(2)
-----
--------->
ANAC58
<---------
At4g35610
---------->
DOF2
--------->
ANAC46
<---------
LBD16
<---------
HSFB2a(2)
--------->
ANAC58
--------->
LBD16
<---------
YAB1
<--------
<----------
DOF2
----------->
HVH21
<---------
ICU4
<---------
ANAC58
<---------
DAG2
<---------
At4g35610
<----------
DOF2
--------->
ICU4
<---------
ANAC58
<---------
At4g35610
<------
NtERF2
--------->
ANAC58
<---------
YAB1
--------->
DAG2
--------->
At4g35610
--------->
At4g35610
------->
TEIL
--------->
CCA1(2)
--------->
HSFB2a(2)
gattcagcggctttacgccatgctcggcagaccgcggatgcacgaatgttatcttttaaaccaagataagacat
tattatttccaaaaggcttgatgtaa
6594500
<---------
AHL20(2)
<---------
TOE2(3)
---------->
DOF2
<---------
AHL20(1)
--------->
AHL20(2)
--------->
MYB52(1)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
--------->
ATHB51
--------->
AHL20(1)
<--------
HAHB4
--------->
AHL20(2)
<---------
ICU4
--------->
TOE2(3)
--------->
YAB1
--------->
YAB1
--------->
YAB1
--------->
At4g35610
<------------
CBF
<---------
WRKY18(1)
<--------
HAHB4
-
------------>
CBF
>>>>>>>>>>>>>>>>>
LFY
--------->
WRKY12
--------->
ARR11(3)
<-
--------->
ANAC58
<---------
At4g35610
----------->
HVH21
<---------
ARR11(3)
--
--------->
ANAC58
<<<<<<<<<
TBF1
<xxxxxxxxxxxxxxxx
smallRNA(s)
<---------
ICU4
---
---->
MYB59
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ICU4
<------
ZmHOX2a(2)
<------
-
REM1(1)
--------->
ARR11(3)
--------->
ARR11(3)
<---------
YAB1
<---------
ATHB12
-------
ggtcagcaatagtaagaacttcttcttcagcccattgttactaacatcttcgtttgaccttcataattaaagatttcgatcattaaattaactgaaataa
6594600
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
<------------
CBF
<---------
AHL20(1)
--------->
ARR11(3)
--------->
AHL20(1)
---------->
TBP
--------->
LBD16
--------
AHL20(1)
--------->
ANAC58
---------->
DOF2
------->
AHL20(1)
--------->
ANAC58
--------->
ANAC58
------>
AHL20(2)
--------->
SPL7
--------->
ANAC46
<------------
CBF
--------->
ANAC58
--
---
AHL20(2)
<---------
RAP2.6(3)
----------->
GT1
--------->
ANAC46
---
-->
AHL20(2)
<------
NtERF2
<----------
ID1
<------------
CBF
<---------
ARR11(3)
--------
atatatattgcttttggagccgtaagacatgaaataccacaaaaccatgagattgaaaattgtctcaaaccaagatgctacaagaaagccgagaaaacaa
6594700
--------->
ATHB51
--------->
LBD16
<---------
LBD16
<---------
ANAC46
<---------
LBD16
<-----------
GT1
<---------
ICU4
<------------
CBF
--------->
ATHB51
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
<---------
MYB52(2)
--------->
ICU4
<--------
ATHB1
<---------
YAB1
--------->
ATHB12
-
--------->
YAB1
--------->
YAB1
<---------
ICU4
<---
-------->
DOF2
<------------
CBF
<---------
ICU4
<---------
ATHB51
<------
------>
YAB1
--------->
TOE1(3)
<---------
YAB1
--------->
ICU4
--------->
ANAC46
---->
CBF
--------->
TOE2(3)
--------->
ICU4
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
taaaagttgtcccaaactcatcttagaaaccctaattgtttcatagtggaagttataattatttacgggaataattggccacgaactccacgaagatgca
6594800
--------->
YAB1
<---------
ATHB12
--------->
AHL20(2)
<---------
AHL20(2)
<------
ZmHOX2a(2)
--------->
AGP1
-------->
At4g35610
<---------
AHL20(2)
------
At4g35610
<---------
GLK1(2)
--------->
CCA1(2)
-
TEIL
<---------
ATHB12
--------->
AHL20(2)
--------->
TOE2(3)
tcagatcaataaatcatgctatagattctacatttaatatggcatcttgttcataaaaccaaaaacctttgatagagatgggatagagagtattgagaga
6594900
<-------
<---------
ANAC55(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
CCA1(1)
--------->
RVE1(1)
--------->
CCA1(1)
<---------
GLK1(1)
--------->
GLK1(1)
--------->
At4g35610
<---------
RVE1(1)
<----------
DOF2
----------->
GT1
--------->
ANAC55(2)
--------->
At4g35610
=================================================
------>
MYB83
------>
ZmHOX2a(1)
--------------->
AGL15
<---------
ARR11(3)
--------->
CCA1(2)
------>
MYB46(1)
<---------
At4g35610
---------->
DOF2
--------->
ARR11(3)
gagatagagatgggataactcaccaaatgagctttcctctctgagttgccatttcgatttagagaagatgaaaggggagaattagatatcttatgtaaca
6595000
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AGI:
At4g10695.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15899.1); contains domain PTHR13980 (PTHR13980); contains domain PTHR13980:SF12 (PTHR13980:SF12)
Range:
from: 6593770
to: 6594474
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.