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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                        <---------ANAC58
                                                                                      <---------ARR14(2)
                                                                                      --------->ARR11(3)
                                                          --------->TOE2(3)           --------->ARR14(3)
                                                         ----------->GT1              <-----------ARR10
                                                         --------->ANAC46             <---------ARR14(3)
                                                      <-------TEIL                    <---------ARR11(3)
                                                     --------->DOF5.7(2)              --------->ARR14(2)
                                                 <---------DOF5.7(2)                  --------->AHL20(1)
                                               --------->DOF5.7(2)                    <---------AHL20(1)
                                             <---------ANAC58           --------->CCA1(2)
                                         --------->DOF5.7(2)           --------->ARR11(3)
                                       <---------ANAC46 <---------TOE1(3)       --------->ANAC46
                                      <---------TOE2(3)<---------DOF5.7(2) <-------TEIL <---------ANAC58
         ---------->DOF2          <---------ICU4<-------TEIL           <---------ARR14(2)
      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ANAC58          --------->ARR14(2)
      <---------ANAC46        <-------TEIL <---------DOF5.7(2)<---------YAB1   <-------TEIL
    ----------->GT1         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------ARR11(3)       ----
  
ctaagaattgtgtaaagagaaattggattaagcttcatgtttacgtttacgttcacgttcacgttaatattgtagatatacatacacaatatcttgccaa  5702900
                                         <---------AHL20(2)
                                         --------->AHL20(2)
       <---------TOE2(3)                 --------->YAB1
      ---------->DOF2                   <---------YAB1                        <---------AHL20(2)
     --------->AHL20(2)               <---------ICU4                          --------->AHL20(2)
     <---------AHL20(2)              --------->ICU4                          --------->AHL20(2)
 --------->AHL20(2)                  <---------YAB1                          <---------AHL20(2)
 --------->AHL20(1)              --------->MYB52(1)                       <---------AHL20(2)
 <---------AHL20(2)              ------>MYB83                     ----------->GT1  <-----------GT1
 <---------AHL20(1)              ------>MYB46(1)         ---------->DOF2  --------->AHL20(1)
--------->AHL20(2)      --------->AHL20(2)         --------->ANAC58       --------->AHL20(2)
<---------AHL20(2)  >>>>>>>>>>GT-3b--------->YAB1  --------->ANAC58      --------->AHL20(2)
----->AHL20(2) ---------->DOF2 <---------MYB59     --------->ANAC46      <---------AHL20(2)
  
aaaataaattaaagaagtcaaagaaaaataaaaacctaacataattatatatgcaaacaacaaagcatatagataattaaattaataaacattttcaaaa  5703000
                                              <---------AHL20(2)
                                          <---------AHL20(2)         <---------AHL20(2)            <
                                         --------->AHL20(2)         --------->AHL20(2)         -----
                                         --------->ICU4             --------->ICU4           <------
                                       <---------ICU4             <---------ICU4             <------
                                   --------->AHL20(2)           <---------TOE2(3)        --------->AHL20(2)
                                   <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(2)
                                  <---------AHL20(2)          <---------AHL20(2)        <---------AHL20(2)
                                  --------->AHL20(2)         --------->AHL20(2)         --------->AHL20(2)
                            --------->HSFB2a(2)              <---------AHL20(2)      --------->AHL20(2)
                            <---------HSFB2a(2)           --------->AHL20(2)      ----------->GT1  -
                      <---------ICU4 <---------TOE2(3) ----------->GT1           --------->ANAC46---
              <-----------GT1  --------->AHL20(2)     --------->ANAC46   <---------AHL20(2) --------
  
gaatatagtattgtattttacacaaacatttctataaattaatatttattaacttatacgataaattaatatttattaacttatacgataaattaataaa  5703100
                                --------->AHL20(2)
                                <---------AHL20(2)              <---------AHL20(2)
                --------->AHL20(2)                           <---------AHL20(2)
                <---------AHL20(2)   <---------AHL20(2)      --------->AHL20(2)
   --------->AHL20(2)          <---------AHL20(2)           --------->AHL20(2)
   <---------AHL20(2)          --------->AHL20(2)           <---------AHL20(2)
--------->AHL20(2)          --------->AHL20(2)    <---------MYB59
<---------AHL20(2)    --------->ZAT6--------->AHL20(2)     <---------YAB1
---------AHL20(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ICU4
---->ICU4      <---------AHL20(2)   <---------AHL20(1) --------->TOE2(3)
---AHL20(2)    --------->AHL20(2)   <---------AHL20(2)--------->YAB1
---ICU4  ----------->GT1<---------YAB1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    <-----------GT1
-------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------YAB1                 XXXXXXXXXXXXX
------>TOE2(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)------>ZmHOX2a(1)             <---------YAB1
->AHL20(2)  --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             --------->At5g28300
  
tattaatttataagataaattaatatcactataaattaataaaatttcatggtcctaacattattaatttatagagtttctactgtaattgtttcaattc  5703200
                                                                                 <---------YAB1
                                              <---------ICU4                <---------AHL20(2)
                                              --------->YAB1           ------>ZmHOX2a(1)
                                             <---------ATHB12         --------->TOE2(3)
                                            ------>MYB46(1)        <---------ARR14(2)       <-------
                                            ------>MYB83           --------->ARR14(2)      <--------
                                           --------->WOX13(1)     <---------CCA1(2)<------------CBF
                                         --------->MYB46(3)     --------->YAB1  <-----------GT1
           <---------AHL20(2)    --------->MYB46(3)          <---------CCA1(2)<---------AHL20(2)
XXXXXXX>MIR869.1    <-----------GT1    <-----------GT1---------->DOF2 --------->TOE1(3)    <--------
  
tgaagctatagtttttaatggttttacaaattttcaacaatctaaccaatcatgtccaaaagtcgtatcatatccttatattttttcattgtattatttt  5703300
                                                          --------->YAB1
                                             --------->YAB1                     <---------ANAC58
                               <---------AHL20(2)  --------->ANAC58             <---------ANAC58
    ----------->GT1           --------->AHL20(2)   --------->ANAC58      <-------TEIL
--YAB1                        <---------AHL20(1)   ----------->GT1 ----------->RAV1(2)  <---------ALFIN1
-AHL20(2)                     <---------AHL20(2)  --------->DAG2   <---------ANAC58 <---------At4g35610
-AHL20(1)                ------------>CBF  *TSS  ---------->DOF2   <---------ANAC58 --------->At4g35610
  
taaaaatttgtaaattttaagaccaaaaaacaatttttttttgttttatcagaaaagcaaataatcaattgcctgattcattttcgtagctccaccgaga  5703400
                                                               --------->ARR11(3)
                                                               <---------ARR11(3)
                                                         --------->MYB46(3)
                                                       ------>MYB83                      <---------ARR14(2)
                                                       ------>MYB46(1)         ----------------->AGL3
                                                     <---------MYB46(2)        ----------------->AGL2
                                                     --------->DEAR3(1)       <------ZmHOX2a(2)
                                  --------->MYB46(3) <---------MYB52(2)       ======================
                                <---------ARR14(2)   --------->MYB46(3)      <---------ARR14(2)
                    --------->ARR11(3)    --------->ATHB12--------->ATHB12   --------->ARR14(2)    <
           <------NtERF2        --------->ARR14(2)  --------->ANAC58    --------->ARR14(2)     <----
          --------->RAP2.6(2)  <------ZmHOX2a(1)    --------->ANAC58    <---------ARR14(2)--------->CCA1(2)
      --------->ALFIN1      --------->At4g35610 <-----------HVH21------>ZmHOX2a(2)       --------->ARR14(2)
  
aaactccgagtggccgaaacagagatttcgcagaggaaccatcactgattgtgtcaccgaaccattgatcttcaagttccgatccaatttcagatatgtc  5703500
                                                              <---------ARR11(1)
                                                              <-----------ARR10
                                                              --------->ARR14(2)
                                                              <---------ARR14(2)
                                                              --------->GLK1(2)                <----
                                                              ------->TEIL                     <----
             --------->DAG2                                  <---------CCA1(2)                 -----
  --------->ATHB12                                           <---------ARR14(1)                <----
 <---------YAB1                                            <---------ANAC58          ----------->GT1
======HOX2a_HOX2a                                          <---------ANAC58      ---------->DOF2
------ZmHOX2a(1)     <-----------GT1                 <---------DOF5.7(2)      <---------HSFB2a(2) --
-----ANAC46 ---------->DOF2                        --------->DOF5.7(2)      <---------ATHB12   <----
  
gaggattattggtagaaaagggattaactatatccatagactaaattctgcgtcgttcacgagcgtatctgcttcttcaatcgagaaagggcaaaatcgc  5703600
          --------->TOE2(3)
<---------WOX13(1)
-----ANAC55(2)                                                                 <---------TOE2(3)
-----ANAC46  <---------DOF5.7(2)                                         --------->AHL20(2)
---->ANAC55(2)             ---------->DOF2                       <----------DOF2
-----ANAC58--------->DOF5.7(2)           ---------->DOF2    ---------->DOF2 <---------YAB1
------->ATHB12           ----------->HVH21          <----------DOF2      <---------AHL20(2)
-----ANAC58<---------MYB52(1)  ----------->GT1      <---------DAG2   ---------->ID1
  
gtgattgatgcttcgttaactcttattcgtgaaagggcaaaactcaaagtaaacacttttttgtaaagctttgtcatttattaatgtttgtgttcatgtc  5703700
                                                 <---------At4g35610
                  <---------ZAT14                --------->At4g35610
                  --------->REM1(2)          --------->ALFIN1
                  --------->ZAT14          <---------ANAC46
        <---------ICU4                <----------DOF2
       <---------YAB1             <---------ANAC58             <---------ARR11(3)     <-----------HVH21
       --------->ICU4             <---------ANAC58  ---------->DOF2        <---------REM1(1)
  --------->ANAC55(2)     <---------ZAT6  <---------TOE2(3)--------->REM1(1)    <---------ALFIN1   <
  
tgtttatgtgattattgtctgtgtagggagagttagtgcgtcttttaggtggagctaaagcttcaacatctcttcttggtgtaccacttggtcacaactc  5703800
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AGI:  At4g08900.1   
Description:  arginase. Identical to Arginase [Arabidopsis Thaliana] (GB:P46637); similar to arginase, putative [Arabidopsis thaliana] (TAIR:AT4G08870.1); similar to arginase [Brassica napus] (GB:AAK15006.1); contains InterPro domain Ureohydrolase; (InterPro:IPR006035)
Range:  from: 5703344    to: 5705343    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.