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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
TOE2(3)
--------->
TOE1(3)
<----------
DOF2
<---------
DAG2
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
TOE1(2)
--------->
ANAC58
------>
MYB83
------>
ZmHOX2a(1)
<---------
ANAC55(2)
------>
MYB46(1)
--------->
ANAC58
--------->
TOE2(2)
--------->
ANAC55(2)
<---------
MYB59
<----------
DOF2
--------->
TOE1(3)
--------->
YAB1
--------->
ANAC55(1)
---------------->
AGL1
--------->
ANAC58
--------->
TOE2(3)
--------->
ATHB12
--------->
ANAC46
---------------->
AG
---------->
DOF2
--------->
TOE2(3)
<---------
ATHB12
----------->
GT1
<-
ctaccaaattagacaaacaactttaagcaaaaacaaaaaccctaaatcctaagttttgatcaaatcatagggaacaaaaaaaacgtaactttac
cttgaa
2519600
------>
ZmHOX2a(1)
--------->
KAN4(2)
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<---------
LBD16
<-----------
RAV1(2)
----------->
RAV1(1)
<---------
ARR11(3)
<---------
ZAT2
--------->
ARR11(3)
--------->
ZAT2
--------->
ANAC58
<---------
ARR11(3)
--------->
TOE2(2)
--------->
At4g35610
<---------
GLK1(1)
--------->
TOE2(3)
--------->
ANAC46
--------->
ANAC58
<------
ZmHOX2a(1)
--------->
TOE1(2)
---------->
DOF2
------->
GAMYB
--------->
GLK1(1)
<---------
At4g35610
--------->
MYB52(1)
--------->
ANAC58
--------->
At4g35610
<---------
RVE1(1)
--------->
ZAT2
----------->
GT1
---
--------->
ANAC58
--------->
RAP2.6(2)
--------->
ARR11(3)
<---------
ZAT2
----------->
GT1
------->
GAMYB
---------
ID1
<---------
At4g35610
<---------
ARR11(3)
--------->
At4g35610
--------->
YAB1
-
gaagacgaaataaggcacagcagcaacagagtaagcctcagatatctcaggatgttcctcagcttcaac
ctaagaagataaaaccaataacagtcaaaaa
2519700
<---------
AHL20(2)
--------->
AHL20(2)
----------->
GT1
--------->
TOE2(3)
----------->
GT1
------->
TEIL
--------->
GLK1(1)
---------->
DOF2
<---------
ZAT14
---------->
DOF2
<---------
GLK1(1)
------>
TOE2(3)
--------->
WRKY18(1)
--------->
TOE1(3)
<-------
PIF5
-------->
ATHB12
XXXXXXXXXXXXXXXXXXXX>
MIR3440B-3P
------->
PIF5
cctcattgaaagtgataaaattttgaattggtcaagagaacagagacgaac
cctaaagaagtgagcacgagggaaatcagtagcgagatgagagaaaact
2519800
------>
NtERF2
--------->
DEAR3(1)
--------->
RAP2.3(2)
<------
NtERF2
--------->
ATERF1(1)
--------->
DEAR4(2)
--------->
ORA47(2)
--------->
RAP2.3(1)
------>
NtERF2
<---------
ATERF1(1)
--------->
LBD16
<---------
RAP2.3(1)
--------->
ARR14(2)
<-----------
RAV1(2)
--------->
SPL7
<---------
ARR14(2)
--------->
ANAC46
<-----------
RAV1(1)
--------->
ZAT2
<--
<-----------
HVH21
--------->
ANAC58
--------->
ANAC58
----
--------->
YAB1
<---------
HSFB2a(2)
--------->
ZAT18
--------->
ANAC58
<----------
DOF2
--------->
At4g35610
=============================
RAV
<------
NtERF2
<---------
ALFIN1
<---------
At4g35610
---------->
DOF2
--------->
ANAC58
<---------
ANAC46
--------->
DEAR3(1)
------>
ZmHOX2a(2)
<---------
ALFIN1
---------->
DOF2
<---------
DEAR3(1)
<---------
ZAT2
<---
tgatccatctgcttcgaagcatcacaccaagaagcccagaagtgaagcacgactggtgcgccgctctggcgcaagttatcaagctccgcctttgaaacga
2519900
<----------
DOF2
<---------
DAG2
<---------
At4g35610
--------->
ZAT6
--------->
SPL7
------>
ZmHOX2a(2)
<---------
ZAT14
--------->
GLK1(1)
<---------
AHL20(2)
<---------
SPL7
<------
ZmHOX2a(2)
--------->
AHL20(1)
--------->
ZAT14
<---------
GLK1(1)
--------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
ARR14(2)
<---------
AHL20(1)
--------------------->
WRI1
<---------
ARR14(2)
*
TSS
--------->
TOE1(3)
--------->
ARR11(3)
<-----------
GT1
--------->
TOE2(3)
<---------
ARR11(3)
<---------
YAB1
-------
ARR11(3)
<------
ZmHOX2a(1)
<---------
ANAC46
<
----->
GLK1(1)
<---------
HSFC1(2)
----------->
GT1
--------->
ARR14(2)
------
GLK1(1)
--------->
HSFC1(2)
<-----------
RAV1(1)
<---------
YAB1
<-
tatccttcaccgtaccgctcat
cttcgaagagggagaaggatctcttaacactttttttttgtgttgtgatttac
caatttattatcgagcagaatacac
2520000
------>
MYB83
------>
MYB46(1)
--------->
MYB52(1)
--------->
MYB55(1)
--------->
ZAT18
---------->
DOF2
<---------
MYB46(2)
<---------
ZAT18
<---------
ANAC58
<---------
MYB59
<---------
TOE2(3)
<---------
ANAC58
<-----------
GT1
<---------
MYB52(2)
<---------
ZAT18
<---------
ANAC46
--------->
AHL20(2)
<---------
MYB111(1)
<---------
ANAC58
-------
GAMYB
---------->
DOF2
--------->
YAB1
<------
ZmHOX2a(1)
<---------
TOE1(3)
----------
RAV1(1)
<---------
TOE2(3)
---------->
DOF2
------------>
CBF
<---------
ANAC58
tctgttgctggagaaagaaaggagatttatgtaaatataacaaaataaaaggacctaacgatacaattagggtttttgtgtgcccaatgtgatgctaaaa
2520100
--------->
AHL20(2)
<---------
AHL20(2)
--------->
TOE2(3)
--------->
YAB1
----------->
GT1
--------->
MYB59
<---------------
AGL15
<------
NtERF2
--------->
AHL20(1)
-----------
--------------->
AGL15
--------->
At4g35610
--------->
ANAC55(2)
<----------
DOF2
<---------
LBD16
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
At4g35610
--------->
AHL20(2)
--------
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
AHL20(2)
----------->
GT1
--------->
ANAC55(2)
----------->
GT1
<-----------
HVH21
<---------
AHL20(2)
----------->
GT1
<---------
ZAT18
--------------->
AGL15
--------->
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(3)
----
ttgctcacttatgtaatttctttttataaaaatagtaaaattatatatgtcagcggaaggaaaaaaaaattggaaattaagtaaggtaaaaatgttaaaa
2520200
--------->
AHL20(1)
--------->
ICU4
--------->
DAG2
<---------
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
<---------------
AGL15
--------
<---------
AHL20(1)
--------------->
AGL15
--------
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
>
GT1
--------->
AHL20(1)
<-------
TEIL
--------->
ZAT6
<---------
AHL20(2)
->
AHL20(2)
--------->
GLK1(2)
--------->
AHL20(2)
--------->
CCA1(2)
====================================
----->
GLK1(2)
--------->
YAB1
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
ttctaggtgataacaatctttaaaaataaaataattttgaaaaatattagatacatttaaattaaaactactaaaagtaagtttgactaataaaatctta
2520300
<------
ZmHOX2a(1)
<---------
ICU4
<---------------
AGL15
--------->
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
<--
<---------
AHL20(2)
--------->
YAB1
<---------
ARR14(2)
<------
MYB83
------>
ZmHOX2a(1)
--------->
AHL20(2)
<---------
GLK1(2)
<------
MYB46(1)
->
TOE2(3)
<----------
DOF2
--------------->
AGL15
--------->
WOX13(1)
<---------
YAB1
--------
->
YAB1
<-----------
GT1
--------->
ZAT6
----------->
GT1
------>
ZmHOX2a(1)
--------->
YAB1
---------
==========================================
MADS_MADS
--------->
YAB1
--------->
ARR14(2)
<--------
atcctatttttttctttctaaaattaatactaattagaggaattgtatatatcaatcctcatcgaattggattctcataaaacagtctaagaattaggtt
2520400
<---------
YAB1
--------->
AHL20(1)
<---------
ICU4
--------->
ATHB51
-------->
ATHB1
<--------
HAHB4
--------->
YAB1
-
<----------
DOF2
<---------
MYB52(1)
--------->
AHL20(2)
<-
-------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
-----
--->
GT1
<---------
AHL20(2)
<---------
ATHB51
<----
>
MYB59
<----------
DOF2
----------->
GT1
<---------
AHL20(2)
<-----------
GT1
<----
-
TOE2(3)
<-----------
GT1
--------->
ALFIN1
----------->
GT1
--------->
ICU4
-----
acaattctttttttctcctttgttttgtatgtgtggaattgtttaattctgttatattaaaaatccacaattattttagcatttgtatttttagttattt
2520500
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AGI:
At4g04950.1
Description:
thioredoxin family protein. Identical to Monothiol glutaredoxin-S17 (GRXS17) [Arabidopsis Thaliana] (GB:Q9ZPH2); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT4G32580.1); similar to hypothetical protein OsI_033059 [Oryza sativa (indica cultivar-group)] (GB:EAY79100.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Glutaredoxin; (InterPro:IPR002109); contains InterPro domain Glutaredoxin-related protein (InterPro:IPR004480); contains InterPro
Range:
from: 2517664
to: 2519975
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.